Basic Information

Gene Symbol
Arid2
Assembly
GCA_027564075.1
Location
JANSTU010002204.1:5914-12048[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-23 4.6e-20 71.9 0.0 2 89 41 126 40 126 0.95

Sequence Information

Coding Sequence
ATGGATTCGTCCCAGGGAAATTTGTCGATGGCCTCCATTAACGAGGATTCGTTCAGTAGCTTCACAAAGCCGCAGACGGCCCGCAAAGGCGGCTTTATGCGGGTGGACGACGAACGCGACCGCACAAGTTTTTTGCGGGATTTGTACCAGTTTCACGACATGAAAGGTACGCCCATTGCACGAGTACCCCGTATAAATGGACAAGAGATAGACTTGCACAAGTTCTACAGTCTGGTTACCGGTCGAGGAGGATGGGCAAAGATCAATTATCGAAATGAATGGGAAGACTTGGTACCGGAATTTAATTTACCTAAAAGTTGCGTCAATGCATCAGTGGCTCTAAAGCAAATCTACTTGAGACACTTGGATCGTTACGAAAAAGTCAATTTTCAAGGCGAAGAAAATGAACGTGCTGACGATCCTGACGAAGATAATCGTCATAAAAAATGGAACAACAAAAATCTTAACGAAGTACCACTAAAATACAATCATGGTCAGCACATTGTGTCCGATAGCCTTCGTATGATGCACAAGCTCTCCACTGAGCTCTACAAGTCCACTGAATATGATCGTCTCATAATGTCCTTGATGTCACCACTTCCCAATGAACAGGACTTTGCCATTAACGTTTGTACGCTTATGGCAAACGAAAGCAAGCACACACTTAAAATCGATCATTGTCCAAGACTTTTAGAAGTCCTCCTTGGTCATGCTGGCGTTTATTCTCACTTTACCTTAAGAGTACTTTTCATTGAATTTTACTCAAAGATTAGAAAAAATTCGCTACAGTCATTCTGGTCAGACTGTCTACACGATAAACCAGATATATTAGAACTGTCATATGAGGACTACTATCAGTCACCTGAAGATAAACTAGAACATGCATTGTCTGGCCGCAAAGATTCTGAAAGAGAAGTATTCGAGGACGGACTCAATTCGGGACCCAGTGAACTTGACGATCTTGGCCCAATGGATTTTCTAAACCTGAGACGTGGTCTTGGCACGCATGATTATATTGGCCAGCGTGTTCATCAAATAGCCTCAATTCTGCGAAATCTCACGTTTATCGAAGAAAATCTGCCAGTTTTGGTACGTAACAAATCGTTCATTCGATTTCTGGTTATGAGCTCAAACATTCGCTGGGGTAATCTACATCACATGGGTCTTGATATGCTCGGAAACATTGCACCTGAATTAGAGCTAGCCGATCCTGCTGCTGACGATTTAACAAGATCATTATTATCCACAGTATCCGATGGTCTAGAAAGTCCTGACCGAGGTGTCATTATTAGTTGCCTAGAAATCTTACATAAGCTCTGTCTGAGAGAAAGCAACGAAGATCCTTTGCACAAGTGCCTAGACAAGAAAACATACGCACAAATATGCCTGTTCCTGTCACTAAATGACATTATGTTATTACTGTACACACTTGAATGCATTTATGCCCTAAGTTCACTCGGTGAGAAGTCATGTCTGGCTTTTGTACAGGTCCGAGGTATTGTTGATGCCCTTGTATCACTTGTAACCGTTGAAGCTCAAAGCTACGGTCCAGACGGATGCATTTTGATGCGAGTCGTAGAAACTGTTCCAACGAATATGCTTAATAGCACACAAATGACTGGAAACACTGTCGGATCACAACACGGCCAATCTCAAATGTCTACACTTCAAACAGTATCCGCGTCGATGCATCAACTAGATGGAAACACATCAAATACTTTGTCTACTTTTACCACGGATTCACAAAAATCATTGCCACCTGCTTCAAATGCAGTTCCAGCACAATACCAGACAGTTCCAGTTTCTCAGCCAACTCCAGTGCGAATTATTCAATCTCCACCACCTGTCATCAAAGAGAACAATAGCATTGTAGTATCCACCAATACTGTGGCCTCAAAACATGCCCAACAGCAAGCACTGCAGGAGAACGAACAATTTGCTCTAGCCTGGTTGCGTGCCACATTCGAGCCTGTAATGGCACTAACCTGTCGTATTGACCAGCAGGATCTTTACAAAATGTACATTGCAGCTAGTGCTAAGATTGGTCGAGTGGGTACAGTGACACCAATGCATTTTCCGCGTTGTGTGAGATCAGTTTTTGGAGGCACTGTTGGTCCAAATAGTGTCAAGGTAAAACAGAACAATATTGAATCTTCAGCACTTTACTATGAAGGCATTCGAATCAGAGCTAAACCACTGGCCGTCGTCCACAAGGGATCGATTTTGCAGGCACAGGTGCACCCGTCTAGTGAAGTAAGTGTTAAACGGGATACTTCGACAATGCTGAGACAAAATTCTAGCGTCATCCAGTCATCCATACAGCCAACAACCAACTCATTTTTGGTAGCTCATCTAAACGCCAAAAATCAACAGCAGCAACAACAACAACTAACCCAGCATCAACCACAGACTCAGATCCTGCAGCAAGTGTTGAGCAACCAGACCGGCGAAACGATGATGGTGATGGCCCACCAGCAGATGCCCAAAACCACTATGATGAATGCCACAGCAAGCGGAAGCCATCCAAGCAGCAACGTTGTTGTCGTAAGTAGCAACAGTTCCACAGTGACCGGTGTAACATCGTCTTCATCTCCGTCTACATCTGTATCCGCGTCATCTCAAACGTCTCTCATAAAAAGCCTACTGGCAAACAAGGTAACCACCGTTGAGTATAGCCACGCTGCTGCTGCTGCCGGCGCTAGCGTTGTGTCGTCCTCTCTGATTGCTCCGAATGTTTTAGTGCATCAGGTGGCGCAACGACAGCATTTGCAGAAACAAAAAGAAATAGCTCAACAGCAACAACAGGTCATTGCCTCAAACACTGGCGGCGTCTCAATCGCTTCATCGACGATAACATCAACCATTTCAAGCAGTATTAACATTGTAAAGCAACCGCCAACGACATTTGTTAAATCAGTTGTATCCTCGTCAACATCTTCGTTACCGTCAACGAACCCGACTAAAATGGAGCCAGACTCAACAAATTCAAACTGGGATCCTGTTCCACCACTTGCTCCTCTCAGTGGAGTTAATAAAAGTCAGCCAGTAAGCAGATTAGACGAAGACTCAAACTCGACAGGCAATTTGTCCATCACCTCAAGTGTTGCAAGCATGAATCCCACCACACCGGCACTTGATGATCACGAGAATTCATTTAGTGGATTTGAAGGTCTTCTGATACCAATCTCAAAGATAGTCCTTACCGATGACGATTCCAAGGATTCTCTAACGAAACCATCACAAGTGGTTAGCTCTAACAAAATGCTAGCCGATCTGCTTGAGCGTAAATCTTTAGAGCCGCCATTTAACAGTGCCGCCGATAATTCTTTGAAGCGTAAACTTGATGCAATCGTAGAAAGCAGTGAAGTAATTCCACCGACTAAAAGACAAACAGGCGAAGAAGGTGATCCTATTGAAATTGACTCAACCGAAGAAGAGGAAGTCGTCCAGAAAACACCATCTTCGAATGCTGCTAATCTTTACGCCAAACTAGCCGCATCATTACTCGAAGATGAAGATATGGAAGAGGAAGAAGATATTAAACAACCACCACAGTTGCTAAAGTTTACTCAGGCACCAGCACAACCAACTATGCAGCAGCAACAACAGGAAAAAACTAAACAAATCATCGCTATGCCGATACAACGACAAATCATCATGTCACCAAATCAACAGCCAATCATTATGTCACCAACAAACACAGCGCAACAGCAGATGGGAACTCAGGCAACAGCTACTATCAAAACAGAGTCCGGCTACCAAACTGTACCGGTGATACTTCAGCATTCAGGCAATTCAGTTCCAGCAAATCAGAATTTCCAAATACAAAAACAAATTGGACAACAGATTATACAGCCCGTGATGCAACAGCCTCAGCAGACGACACAATACATGCTAGCCACAAACAATCAAGGTCAAACGTATCTGGTTGCACAGCAGGCTCCACAACAGCAACAGCATCAAACGGTTCTCGTACAAACATCTCAGCAGCCCGGAGCAGCCACTAAAACCATATACTTCCTTCAACAACCCGGTGGCATGGTAACACAGCAAGTAGTTCAACAAAATAGCCCACAGATAATTACACCCGGAACACCACAAAAGGTTATCATGACCGGACAACAAGGTCAACAAATGATTATGACACAGATGCCAAGACCTGTACAACATCATGTAATCATGAATCATCCAATGTCTACGGCAGCCAGTATAATGCAATCCAATTCAACCATACAAACGAATGCCATTATTTCGGCTGCAGGAAATGGTTCGATCATAATGAGTGGCGGAGCACAAATTCAACAACACATAGCCATCACACAACAACCCCAAATTGTATCAcaacagcaactgcagcagcaacagcaaatgaatctgccgccgtcagttcaacagcaaCCCGAATTGGTAGAACAAAAAAAAACTAGTTTTGCACCTAGTATCGTTGAAACGGTAAAAGTAGCACCAGAGACACCAATAAAGATGGCATCGATTAAAACAGAAGAAGATGATGGAAGCTGGCTGTGGACTTGTGACTGGCGTGGATGCACAAAAAAAAAGTTTCGGTCGGCCAACGAAGTGTTTATGCACACATGTGCCGTACATTGTCCAGACACAATTGACCCGGCTGCAGAAATCTACTGCCAATGGGGTCCAGGACCAAACCTTTGTGACAATTTGCCACGCAAGCGATTTTCGCTTATGACGCATCTGTTCGATCGGCACTGTACGACAGAGTCCTTCAAAAATGCTGCACAACGGCGTGTATCTACAGGTGTTCAGAGTAATCAACCTACGGCACCTGTAACGATTATCAAGAACCCTTCGGCAACTTCTGGCAGTGAGTCGAACGTAGCTGGAACAGCATCACCAGCACTGTCTACATCATCAAGTGGTTCTACGCCAACAGCAAGTGCGGCAATGCAGGCTATTAAAAGACATGCACTAGATTTCGTGAATCCCAAGGAAATGATGGATGAAAATGAAGGACCAGTCACGAAGAGTATTCGTCTGACGGCCGCATTAATTCTACGTAACCTCGTTAACTACACCAGTTCGGCAAAGAGGAGTCTTCGGTACTATGAACCACACTTGGCAGGCGTAGCACTCAGTAACGTTGAGTCCAGTCGAACCATTGCACAGGTACTTTTCGAAATGAACGAATCGTATCCATTTTAA
Protein Sequence
MDSSQGNLSMASINEDSFSSFTKPQTARKGGFMRVDDERDRTSFLRDLYQFHDMKGTPIARVPRINGQEIDLHKFYSLVTGRGGWAKINYRNEWEDLVPEFNLPKSCVNASVALKQIYLRHLDRYEKVNFQGEENERADDPDEDNRHKKWNNKNLNEVPLKYNHGQHIVSDSLRMMHKLSTELYKSTEYDRLIMSLMSPLPNEQDFAINVCTLMANESKHTLKIDHCPRLLEVLLGHAGVYSHFTLRVLFIEFYSKIRKNSLQSFWSDCLHDKPDILELSYEDYYQSPEDKLEHALSGRKDSEREVFEDGLNSGPSELDDLGPMDFLNLRRGLGTHDYIGQRVHQIASILRNLTFIEENLPVLVRNKSFIRFLVMSSNIRWGNLHHMGLDMLGNIAPELELADPAADDLTRSLLSTVSDGLESPDRGVIISCLEILHKLCLRESNEDPLHKCLDKKTYAQICLFLSLNDIMLLLYTLECIYALSSLGEKSCLAFVQVRGIVDALVSLVTVEAQSYGPDGCILMRVVETVPTNMLNSTQMTGNTVGSQHGQSQMSTLQTVSASMHQLDGNTSNTLSTFTTDSQKSLPPASNAVPAQYQTVPVSQPTPVRIIQSPPPVIKENNSIVVSTNTVASKHAQQQALQENEQFALAWLRATFEPVMALTCRIDQQDLYKMYIAASAKIGRVGTVTPMHFPRCVRSVFGGTVGPNSVKVKQNNIESSALYYEGIRIRAKPLAVVHKGSILQAQVHPSSEVSVKRDTSTMLRQNSSVIQSSIQPTTNSFLVAHLNAKNQQQQQQQLTQHQPQTQILQQVLSNQTGETMMVMAHQQMPKTTMMNATASGSHPSSNVVVVSSNSSTVTGVTSSSSPSTSVSASSQTSLIKSLLANKVTTVEYSHAAAAAGASVVSSSLIAPNVLVHQVAQRQHLQKQKEIAQQQQQVIASNTGGVSIASSTITSTISSSINIVKQPPTTFVKSVVSSSTSSLPSTNPTKMEPDSTNSNWDPVPPLAPLSGVNKSQPVSRLDEDSNSTGNLSITSSVASMNPTTPALDDHENSFSGFEGLLIPISKIVLTDDDSKDSLTKPSQVVSSNKMLADLLERKSLEPPFNSAADNSLKRKLDAIVESSEVIPPTKRQTGEEGDPIEIDSTEEEEVVQKTPSSNAANLYAKLAASLLEDEDMEEEEDIKQPPQLLKFTQAPAQPTMQQQQQEKTKQIIAMPIQRQIIMSPNQQPIIMSPTNTAQQQMGTQATATIKTESGYQTVPVILQHSGNSVPANQNFQIQKQIGQQIIQPVMQQPQQTTQYMLATNNQGQTYLVAQQAPQQQQHQTVLVQTSQQPGAATKTIYFLQQPGGMVTQQVVQQNSPQIITPGTPQKVIMTGQQGQQMIMTQMPRPVQHHVIMNHPMSTAASIMQSNSTIQTNAIISAAGNGSIIMSGGAQIQQHIAITQQPQIVSQQQLQQQQQMNLPPSVQQQPELVEQKKTSFAPSIVETVKVAPETPIKMASIKTEEDDGSWLWTCDWRGCTKKKFRSANEVFMHTCAVHCPDTIDPAAEIYCQWGPGPNLCDNLPRKRFSLMTHLFDRHCTTESFKNAAQRRVSTGVQSNQPTAPVTIIKNPSATSGSESNVAGTASPALSTSSSGSTPTASAAMQAIKRHALDFVNPKEMMDENEGPVTKSIRLTAALILRNLVNYTSSAKRSLRYYEPHLAGVALSNVESSRTIAQVLFEMNESYPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-