Bcin012398.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- stc
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010007556.1:48184407-48187631[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 2.2e+04 -4.1 1.6 15 19 354 358 353 358 0.81 2 14 0.08 9.2e+02 0.3 0.2 4 10 387 393 386 394 0.95 3 14 8.6e-06 0.099 13.0 16.6 4 19 401 416 399 416 0.93 4 14 2 2.3e+04 -4.8 1.8 6 10 442 446 441 446 0.86 5 14 2.7e-05 0.31 11.4 7.7 4 18 455 469 452 470 0.91 6 14 2 2.3e+04 -5.1 3.2 9 13 476 480 474 481 0.57 7 14 1.7 2e+04 -3.9 0.4 5 10 499 504 499 506 0.85 8 14 2.6e-07 0.003 17.9 12.1 1 19 510 528 510 528 0.92 9 14 0.00021 2.5 8.6 11.7 4 18 576 590 569 591 0.87 10 14 0.0066 76 3.8 9.3 1 11 631 641 631 642 0.96 11 14 1.3e-09 1.5e-05 25.2 12.4 1 18 658 675 658 676 0.97 12 14 2 2.3e+04 -6.4 10.0 7 18 720 732 712 733 0.78 13 14 3.9e-05 0.44 11.0 12.9 1 17 769 785 769 795 0.90 14 14 2.8e-06 0.032 14.6 10.9 2 19 802 820 801 820 0.91
Sequence Information
- Coding Sequence
- ATGGATCAATACCAGTCCAACGAAAACCAGTACGttgattttaatcaatttctcAGGCAACAATATCATCCCCAACAACCAGAACACGCATCTGGATTTAACCTAATGTCCACCAATATGGGAGGTGTTTTTAGAGAGGATTTAGTCAGAAATTCAAATTTACTGCCAACTGCAAATGAGTTTGTACCTAACAGACAATATTCCGTGCCTCAAACAATCTCATCTTCGGATCATTTAACTGAATTTactcaaaatttagaaattcgaAATAACGATGAACGTGATGTAGAAAAACCAATACATAGGATAAACCACGATAttgaaacaaatattgaaaatacaacaGGAGCTtctagaaaaacaaataacaatagaGAAAATAAACGAAAACCCAAGCAATTATCTACAAATCAAGCAAGTGGTTCTTGGAGGGACAATGAAGACAATTATCTCCAAAATCGACAAAGAAATGATAAACATAGGTCGAATGATTGGCGTTCTGAACAATATATACCCAGACGAGGCGGAACCGGACGTACAGCTTctcaatatgaaaataattatcgtAGTTACGATATGTCAAACCAGTACTATGAAAATGACCGTGAAGATCGCCCGCATGGAAAATATAATTCAGCCAGGAATTTAGATCGTCAAACAAATAGACACGGTAATGAATACAATGAAAAATCaggtaataatttatatacacgaTACAAGGAAGATGATATCGTTCATAGATCTTCCAAGAATAACATTACTAGATCTGCATATGACAAGCGTCAAGAAAATCATAATCACCAAGAACGCACATCAGACATAAGAccaaatggaaacaaaaaaacgtttgtgCAAAAAGAAAAAGACGATGGTGGTCATTGTTCTCAACGAGAAAAATTGATGAGAGAAATTGACGGTGGTAAATTGGAATGCTTAGTATGCTGTGAAAATATTAAACCCTTCCAACAAACTTGGTCATGTTCAAATTGCTTTCATATCATTCATTTGAATTGTGTTGTAAAATGGGCAGCTAGCTCTAAGTCAGAAGATGGCTGGCGCTGCCCAGCATGTCAGAATATCACTATTAAAGTTCCAAGAgattatttctgtttttgtgGAAAACTTAAGAATCCAGTATACAATCGAAACGATGTCGCGCATAGCTGTGGAGAATTGTGTGCTAAAGTCGATGGTTGTGATCATCCATGTACGCTTCTATGTCACCCTGGTCCATGTCCACCATGTCAGGCCACAGTTTCACGTGAGTGCGGATGCGGGCGCAGCAAAAAGACAATGCAATGTAATCAAAAAGAGATTCTTCAGTGCGAAGAAAGTTGTAATAAATTACTTAGTTGTCTCGTACACAAATGTATAAGTAAATGTCACTTTGGTAACTGTACAGACTGTGAGAAGACTATTGAACACAAGTGTCACTGTGGGCGAAGTAAAAAGGAAGTTATTTGTTCCGAAACCACCAATGAATATTTGAACTATACATGTGGCAAAATATGCAATAAGACGTTGtcatgtaaaaatcacaaatgcaAGAAAATATGCCACAGTGGTGACTGTGGTGATTGCAAACTAATGCCTGAGTTTGTAACATCTTGTCCATGCGGAAAAGCTCCTATATTACCTGGACAACGAAAGTCCTGTACCGACTTAGTAGTTTTATGTGGTGGTACTTGTGATAAGCCTCTTAAATGTGGACCAACAAATAAACCACATCAGTGCCTGAATAAATGCCATTCTGGTGCTTGTTCACAGTGTAACAAAGAAACTGCTGTTAAATGTCGTTGCGGTCACATGGATCAAATGGTAAAATGTCGTCAGTTGATGACTAGAGCGGACGACGCACGTTGCAAAAAACGTTGTACTAAAAAACGTAACTGTGGCAAACATAAATGCAATCAAGAATGTTGCATTGATATTGATCATATCTGCCCAACATCTTGTAATTATAATCTCAATTGTGGAAAACACAAATGCGATCAGACATGTCACAAAGGACGATGTTTGCCATGCTATCGTAGTTCGTTTGAGGAGTTATTTTGTGAGTGTGGTTCTGCCGTTATCTATCCACCAGTGCCATGTGGAACAAAGCGCCCTGCTTGTGATTTGCCATGCTCGCGGTCACATCCATGCAGTCATCCAGTACAGCATATATGTCATTCATCTGCTGTATGTCCTCCATGTATGACGTTTACAACAAAATTTTGCCATGGAAAACATGAACAGAGAAAAACTATTCCATGTAACCAGGAAGACTTTAGCTGCGGAATGCCAtgtaacaaaactttaaaatgcgAACAGCATAAATGTATCCAGTCTTGTCATTCCGGTGAATGTGAACCAGATAATAAAGTCTGCAAGCAAAGCTGTCCTAAGCCAAGAATAATGTGTGCACATAATTGTAAAGCTCCTTGTCACTTGGGTGATTGTCCAGATTTACCATGCCGCGAAAACGTTGAAGTTTTATGCCAATGTGGACATCGCAAAATGATACGAACATGTTATGATTTTTCCAAGGATTTTCGTAGAATAGCAACTGCCAAATTGGCATCTACTATGGAAGATATGCAACGAGGAAATTCTGTAGAGCTGCAAGATGTTTTGGGACCAATTAAATTATCTAACAACAAAACACTGGAATGCAATGAGGAATGCAGAGTATTGGATCGCAATCGTCGACTTGCAATTGGTTTGCAGCTTCGTAATCCAGACATGAGTGCTAAATTACAACCTAGATATTCTGAATTTATTCGAGGCTGGGCCAAGAAAGATCCTCAATTGGTTAATAATATCCATGATAAACTCACCGAGCTAGTAAAATTAGCTAAAGAAAGCAAACAAAAATCTCGCAGTCATTCTTTTCCAACAATGAATCGTGAAAAAAGACAgttGGTGCATGAAATGTGCGAAATGTTTGGAGTCAAGTCGGTGGCTTATGATGCGGAGCCTAATAGAAATGTAGTTGCCACTGCTACAAAGGAGACAACGTGGATGCCAAGTATGAGCATTTCTGAAGTATTGCAACGAGAAAATGGACAGCGTCGCTTACCAGTTCCCAGCAATAATGCTTGGGGGCTAAAAAGATaa
- Protein Sequence
- MDQYQSNENQYVDFNQFLRQQYHPQQPEHASGFNLMSTNMGGVFREDLVRNSNLLPTANEFVPNRQYSVPQTISSSDHLTEFTQNLEIRNNDERDVEKPIHRINHDIETNIENTTGASRKTNNNRENKRKPKQLSTNQASGSWRDNEDNYLQNRQRNDKHRSNDWRSEQYIPRRGGTGRTASQYENNYRSYDMSNQYYENDREDRPHGKYNSARNLDRQTNRHGNEYNEKSGNNLYTRYKEDDIVHRSSKNNITRSAYDKRQENHNHQERTSDIRPNGNKKTFVQKEKDDGGHCSQREKLMREIDGGKLECLVCCENIKPFQQTWSCSNCFHIIHLNCVVKWAASSKSEDGWRCPACQNITIKVPRDYFCFCGKLKNPVYNRNDVAHSCGELCAKVDGCDHPCTLLCHPGPCPPCQATVSRECGCGRSKKTMQCNQKEILQCEESCNKLLSCLVHKCISKCHFGNCTDCEKTIEHKCHCGRSKKEVICSETTNEYLNYTCGKICNKTLSCKNHKCKKICHSGDCGDCKLMPEFVTSCPCGKAPILPGQRKSCTDLVVLCGGTCDKPLKCGPTNKPHQCLNKCHSGACSQCNKETAVKCRCGHMDQMVKCRQLMTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPTSCNYNLNCGKHKCDQTCHKGRCLPCYRSSFEELFCECGSAVIYPPVPCGTKRPACDLPCSRSHPCSHPVQHICHSSAVCPPCMTFTTKFCHGKHEQRKTIPCNQEDFSCGMPCNKTLKCEQHKCIQSCHSGECEPDNKVCKQSCPKPRIMCAHNCKAPCHLGDCPDLPCRENVEVLCQCGHRKMIRTCYDFSKDFRRIATAKLASTMEDMQRGNSVELQDVLGPIKLSNNKTLECNEECRVLDRNRRLAIGLQLRNPDMSAKLQPRYSEFIRGWAKKDPQLVNNIHDKLTELVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVKSVAYDAEPNRNVVATATKETTWMPSMSISEVLQRENGQRRLPVPSNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -