Bcin020527.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bolitophila cinerea
Gene Symbol
nfxl1
Assembly
GCA_010015015.1
Location
JAAAKO010001211.1:3285-6859[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.95 1.1e+04 -3.1 1.3 14 19 190 195 190 195 0.84
2 20 0.72 8.3e+03 -2.7 0.9 4 10 226 232 226 232 0.91
3 20 7.2e-08 0.00083 19.7 17.3 1 19 240 257 240 257 0.99
4 20 1.9 2.1e+04 -4.0 0.9 5 10 282 287 282 287 0.89
5 20 0.019 2.2e+02 2.4 12.3 1 19 293 312 293 312 0.93
6 20 0.84 9.6e+03 -2.9 2.4 5 10 336 341 336 341 0.94
7 20 2.3e-07 0.0026 18.1 12.3 1 19 347 365 347 365 0.99
8 20 0.46 5.3e+03 -2.1 0.9 13 18 388 394 388 397 0.68
9 20 1.5e-05 0.18 12.2 9.6 3 18 402 417 400 418 0.90
10 20 2 2.3e+04 -5.0 2.3 5 10 441 446 441 446 0.91
11 20 0.00069 7.9 7.0 13.7 1 18 452 469 452 470 0.94
12 20 2.7e-09 3.1e-05 24.2 13.3 1 19 479 497 479 497 0.97
13 20 0.9 1e+04 -3.0 1.9 5 10 525 530 525 530 0.91
14 20 2 2.3e+04 -8.5 9.8 9 18 543 552 534 553 0.85
15 20 0.26 3e+03 -1.3 5.8 3 12 566 575 565 575 0.90
16 20 7.7e-05 0.88 10.0 7.2 1 12 646 657 646 657 0.97
17 20 1.1 1.3e+04 -3.3 5.1 1 10 670 677 670 677 0.94
18 20 0.0061 70 3.9 11.8 4 18 687 701 685 702 0.93
19 20 0.39 4.5e+03 -1.8 1.1 8 13 707 712 706 713 0.80
20 20 4.1e-07 0.0047 17.2 10.7 1 16 757 771 757 776 0.95

Sequence Information

Coding Sequence
atgtCGGCCAGAGACAAAGATAATCCGTGGAATCAAAACAAAGGCAGCACTGCCCCAAAACCAGCTCAAAAATCTGTTAAGCGGTCTAAGCAAGTGCCGGCCAATAAGAATGCCCCGCCAGATAGTTCTTCAATTAGCAGCAGTAGCAGCAGCAAAGTAGCTGCTAACACAAAATTTGAAGAAGCCCAAAAGAAACACCTTGAAATTGCTAAGAAACACATTCTGAACTATGAGTCCAGTTCGGATGAGGAGCTAGCCAGTGATTCAGTATTGGATTCGGTATTTAAGGAGTACAGTGGCGAAAAAAAGGAGCTTCAGAAAACACAGCAATTTCTTGAAAACGTTTTCCAGTCTGGTGCTGCAACATGCTTAATTTGCATTGCAACTGTAAAACGCCAGGAGCCGaTTTGGACGTGCGAAAGTTGTTACAGCTTTTTCCATTTACCATGTATCCAGCGATGGGCCAACGACAGCACGTCTCAAAAGAAACAGCAGCAAGACACCGAAGTGGGATATTACAATAATGCCGGTGAATACATTGCCAAAGATAAGAAGGTCATTGTATGGAATTGTCCAAAGTGCCGTACAGATTATTTGCGTGAAGAtataccACGTCAATATACGTGCTTTTGCAAGAACGAGATAGACCCACCAAATCACCCGTGGCTAGTACCGCATTCCTGTGGTGAGCGTTGTGGCAAGAACTTGCAACCGCAATGTGGTCACAAGTGTGTGCTCTTGTGTCACCCCGGTCCATGTCCGCCATGTCCACAAATGCTAACAATCTCGTGTGCTTGTGGCCAGTCTGGGGCTCGAGCAATACGATGTTCCCAGAAATCGTGGCGCTGTATGCAAAAATGCAAGCAGAAACTAAACTGCAACATACACGTATGTGGCCAGACATGTCACAGCCCAGAAAACTGTCCAACGTGCTCCAAGAAGAGTCAACAGCGTTGTGTGTGTGGAGATTCTGTCCAGGAGCGAAACTGCAGTGACTTGGTTTGGAAATGTGAAAAGactTGTGGAAAACCTTTGTCGTGCGGTTTGCATAAATGTCGGATTAAATGTCATGTTGGAGATTGTGGTAATTGTCCATTGGGACAACCGCGTGCGTGTCCATGTGGCAAAGAAAAGTCTGTTGCACCGTGTTCAGAGGAAATCGGTCCATGCGGAGACACCTGCCAGAAATTGCTATCATGTGAACTACACATTTGTGTGGAACGATGTCACAAGGGCAATTGCAGTCCAtgtttagaaattataaaaaagccgTGTCGTTGTGGACTGCACATTAAGGAGTTGCCATGCGTTAAAAGTTTCACTTGCGAAACAAAGTGCAAGCAAATGCGAGACTGCAACAAACACGCTTGCAATCGGAAGTGCTGCGACCAACAGTGTTCGCCCTGCGACAAGATTTGTGGTAAAACGCTTTCTTGTGGCAAGCACAAATGTACTTCATTGTGTCACCAGGGTCAGTGTTACCCGTGTACGCAAAAGGCGCCTGTAAAGTGCCGatgcTCAAGTACTGTAATCCAGGTTCCATGTGGTCGTGAAAAGAAAACCAAACCACCGAAATGTACTCAACCCTGTCGTATTGCGTCTAAGTGTCACCACGAGAATCCACATCGATGTCACATGAATGAATGTCCGGGATGTGTGCGTCTTTGCCAGTTGCCCAACACCACGACAAAATGCCAGCACTTGTGTCAAATGCGTTGTCATGACTCTGTCAGAGTACAGATTATAGACAAGAATTTCAAACCTGCTGGACCATGGGATCGTCGTCCGGAAAGGtttgaaattaaacaactacCGCATCCTCCATGCGAGGAACAGGTTCCGGTGAATTGCGTCGGTGGACACGAATCCGTGCTGTGGCAATGCTGGAATTCGGAACCAAAATCCTGCGGTCGTGTGTGTGGCAGACAGCTAAAATGTGGAAACCACAAGTGCCAGATTGAATGTCACCCAGTGGATGACATCAAatctaaaattcaACAAAATACATGTGGAAAGTGTGAAGAAGCTTGCTCGTTTGCTGGTGTCCCAGGGTGTGTTCATCAGTGTCGACGAAGTTGTCACCCAGATCCGTGTGCACAATGTATGGCACCATTAAAACAAACCTGTCACTGTGGTCTAGCACCGGTATACTTTAAGTGTGGTGAGTTCTACAAAAAAGTCGAAGACGACGCAGACAAACAGGATCAGTGGCAGgcagttcaaaataaaatgctcAGCTGCGGTAATCGCTGTAGTCGTAattacgtTTGTGGTCATCGTTGCACGAACGTGTGCCACTCTGGCAAATGCCCTAATGCCGAACTATGCAACAAAAAAGTCAAAGTACACTGTAAATGCAAACTTCGCAAAGCGGAAGCCGGTTGCGATAAGATCCGGGGCGGCTTTCAGCTGGCGTGCGACGAGGCATGTGCGACAAAACAGTCAGAAAAAGCAGAGGCTGCAGAGAAGCAGGCAAAACTACAGCAAGAACTAGAGGCCGAGAAAAATCGTCTGGAATTACTGGAGTTTGAGAAGAAATTTAGCAAGAAGAAGTACAAGGAGCGAAAGCGAGAAGTTCTCGAAGAGAAAGAGTCTAAACTTTGGATTATTGTAATGATCTGTGCCAGTGTGACTGTGTTGTGTGCGTCTATTggactttattatatttacggaCATTGA
Protein Sequence
MSARDKDNPWNQNKGSTAPKPAQKSVKRSKQVPANKNAPPDSSSISSSSSSKVAANTKFEEAQKKHLEIAKKHILNYESSSDEELASDSVLDSVFKEYSGEKKELQKTQQFLENVFQSGAATCLICIATVKRQEPIWTCESCYSFFHLPCIQRWANDSTSQKKQQQDTEVGYYNNAGEYIAKDKKVIVWNCPKCRTDYLREDIPRQYTCFCKNEIDPPNHPWLVPHSCGERCGKNLQPQCGHKCVLLCHPGPCPPCPQMLTISCACGQSGARAIRCSQKSWRCMQKCKQKLNCNIHVCGQTCHSPENCPTCSKKSQQRCVCGDSVQERNCSDLVWKCEKTCGKPLSCGLHKCRIKCHVGDCGNCPLGQPRACPCGKEKSVAPCSEEIGPCGDTCQKLLSCELHICVERCHKGNCSPCLEIIKKPCRCGLHIKELPCVKSFTCETKCKQMRDCNKHACNRKCCDQQCSPCDKICGKTLSCGKHKCTSLCHQGQCYPCTQKAPVKCRCSSTVIQVPCGREKKTKPPKCTQPCRIASKCHHENPHRCHMNECPGCVRLCQLPNTTTKCQHLCQMRCHDSVRVQIIDKNFKPAGPWDRRPERFEIKQLPHPPCEEQVPVNCVGGHESVLWQCWNSEPKSCGRVCGRQLKCGNHKCQIECHPVDDIKSKIQQNTCGKCEEACSFAGVPGCVHQCRRSCHPDPCAQCMAPLKQTCHCGLAPVYFKCGEFYKKVEDDADKQDQWQAVQNKMLSCGNRCSRNYVCGHRCTNVCHSGKCPNAELCNKKVKVHCKCKLRKAEAGCDKIRGGFQLACDEACATKQSEKAEAAEKQAKLQQELEAEKNRLELLEFEKKFSKKKYKERKREVLEEKESKLWIIVMICASVTVLCASIGLYYIYGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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