Bcin019953.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- grn
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010000076.1:1790088-1807532[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6 1.7e+04 -4.2 0.3 1 6 33 38 33 40 0.75 2 3 5.4e-19 1.5e-15 56.8 6.8 1 35 171 204 171 205 0.97 3 3 5.1 1.5e+04 -3.9 0.1 12 15 331 334 330 335 0.81
Sequence Information
- Coding Sequence
- ATGGTTGATTTAATTGTGGTCAGATGTGATGAAATGGACGTGATGGGTTTAAAGAAGACCGGACGAAATGCAGTAACTAATTATTTAAGGATTGTGTGTGTTGAGTGTAGAGCTATGAACAGttTCATAAACGAGATTAAAGAGTTGTACCAGAGTGGACTGCTCATTCAGATCTATATTTCGgctataaatattagtatttgcCTCATCGTCGGTAGTTTGcagGATGACAAATCATACTCAGCGTATACTATGATATTTTGTGCAGTTTTTCAATTGCTGGTTTACTGTTGGTTAGGAACAGCTTTGGAATTACAGTCGGAAAAACTGAACGCTTCAGTGTACAACCTGAATTGGTTCTCAATGGAAAAGAAGGATCGTAAAACGGTATTGTTTCTACTGATGCTCACCCAGAAACCGATAACATTGTCCATCGGTGGCATCCGGGATTTAAACGTTCAAACCGCTCATTTTTCCCTGCAGAGCGCTGCCCGAAGAGCAGGAACTTCCTGTGCGAATTgcaaaaccacaacaacaacccTTTGGCGTAGGAACCAGAGTGGTGAACCCGTCTGCAATGCCTGCGGACTTTACTACAAACTGCATAAcGTGAATCGACCCCTGACGATGAAAAAAGAAGGAATCCAGACCAGAAATCGAAAACTATCATCCaagtcaaaaaagaaaaaaggaatgGGTGGTTGCATGCCGATGGGAAGTCACCTGGGCATGGGCGATCTAATGAAGCCTCTTGACCACTCCAAGGCATTCGCAGGTGGATTCTCTTCCTCAATGgGTCAGCATGGCCACCTCTCCAGCGGTCTTCATCCTGCGCATGCTCATATGCACGGTGGCTGGTACGCTAGTGGAATGGGAGGCTTGGGCGGATCTAGTGGGCTGCAAGGCGGATTCTCGTCTGGCTCGTTGAATGCTGGTATAGTGCCCCATTCACAATCGTATCACCTTGGCATTAGTTCAATGgGTGCCACCTGGCGACACGGAGACTACACGTGA
- Protein Sequence
- MVDLIVVRCDEMDVMGLKKTGRNAVTNYLRIVCVECRAMNSFINEIKELYQSGLLIQIYISAINISICLIVGSLQDDKSYSAYTMIFCAVFQLLVYCWLGTALELQSEKLNASVYNLNWFSMEKKDRKTVLFLLMLTQKPITLSIGGIRDLNVQTAHFSLQSAARRAGTSCANCKTTTTTLWRRNQSGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGMGGCMPMGSHLGMGDLMKPLDHSKAFAGGFSSSMGQHGHLSSGLHPAHAHMHGGWYASGMGGLGGSSGLQGGFSSGSLNAGIVPHSQSYHLGISSMGATWRHGDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -