Basic Information

Insect: Bolitophila cinerea
Gene Symbol: RREB1
Assembly: GCA_010015015.1
Location: JAAAKO010000756.1:19112764-19118196[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0012 0.082 13.7 0.5 1 23 185 207 185 207 0.98

2 14 0.0004 0.028 15.2 0.2 1 23 216 238 216 238 0.98

3 14 6.9e-05 0.0049 17.6 7.4 1 23 244 266 244 266 0.99

4 14 0.39 28 5.8 2.5 2 20 379 397 379 399 0.93

5 14 5.3 3.8e+02 2.2 0.8 1 10 449 458 449 469 0.86

6 14 0.01 0.71 10.8 0.1 1 23 640 662 640 662 0.97

7 14 3.6e-05 0.0026 18.5 0.9 1 23 671 693 671 693 0.99

8 14 0.00036 0.026 15.3 2.1 1 23 699 722 699 722 0.97

9 14 0.0011 0.077 13.8 2.1 1 23 1085 1108 1085 1108 0.95

10 14 0.00041 0.029 15.1 0.3 2 23 1434 1455 1433 1455 0.97

11 14 0.16 12 7.0 6.3 1 23 1461 1484 1461 1484 0.97

12 14 4.1 2.9e+02 2.6 4.2 1 23 1562 1585 1562 1585 0.90

13 14 0.014 0.96 10.4 0.6 3 23 1632 1652 1630 1652 0.95

14 14 0.052 3.7 8.5 5.2 1 23 1658 1680 1658 1680 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0012	0.082	13.7	0.5	1	23	185	207	185	207	0.98
2	14	0.0004	0.028	15.2	0.2	1	23	216	238	216	238	0.98
3	14	6.9e-05	0.0049	17.6	7.4	1	23	244	266	244	266	0.99
4	14	0.39	28	5.8	2.5	2	20	379	397	379	399	0.93
5	14	5.3	3.8e+02	2.2	0.8	1	10	449	458	449	469	0.86
6	14	0.01	0.71	10.8	0.1	1	23	640	662	640	662	0.97
7	14	3.6e-05	0.0026	18.5	0.9	1	23	671	693	671	693	0.99
8	14	0.00036	0.026	15.3	2.1	1	23	699	722	699	722	0.97
9	14	0.0011	0.077	13.8	2.1	1	23	1085	1108	1085	1108	0.95
10	14	0.00041	0.029	15.1	0.3	2	23	1434	1455	1433	1455	0.97
11	14	0.16	12	7.0	6.3	1	23	1461	1484	1461	1484	0.97
12	14	4.1	2.9e+02	2.6	4.2	1	23	1562	1585	1562	1585	0.90
13	14	0.014	0.96	10.4	0.6	3	23	1632	1652	1630	1652	0.95
14	14	0.052	3.7	8.5	5.2	1	23	1658	1680	1658	1680	0.99

Sequence Information

Coding Sequence: ATGCTTACCGCCCGAACGAATCCCAGCACAATTGCGGGCGTCACCACTAAAATGGAACGACGCACATCCACCAATTCCGAGTCGTCCGTCGAACCGATGGACATCAGCGGCAAGACAAGTGCCAGCACCGATCCGAACTCCTCGTCGATGGCCATCAAATCGGATCACATCGATTCCGAGGACAATTTCGAGTCGGATCGCGAAGATCTGCACATGACCAGCGGAGGCATCGATgctaccgctgtcaccaatgcatcAGCTACGGCCAATgccaccgccaccgccgccaccgCTGCAGCCGCCGCCGCTCAACACTTTGTGCGACGCGAAAACCTGCGACAGCTCGAAGCCAGCATGATGATCATGAGGAAAAAGTATCGCTTAAGCATgccacacaaaaacaacaacaacaacttgcAATACAGCAACTACGATAAGATTGAAAATCTGTCGCGTAATTTGCACAGCAACACAATGCAATCGGGAAATTTTGGTGTAATCGATACGGACACCGAGATGCAGGCCTTTCGTTCGGCGTCCGCCGATGTCAAGTATCCGTGTCCGATATGCGACCGAGTCTCGCTGACCCAGCACGATTTCACCGAGCACATTCGAAGCCATAACAACACCGAGGACACGCAGAATTTCACGTGTCAGATTTGTTTTAAGGTCCTTTCATCCGCCTCCTCGCTAGACCGCCACGTCCTGGTGCACACCGGCGAGCGTCCTTTCACCTGTAAATTCTGCCACGTCACCTTCACCACCAACGGCAACATGCACCGGCACATGCGCACGCACAAGCAAcgcgacggcggcggcggcggcgccaACGAGAACTACGAAAGTGATGCATCCACCGAGTCCAGTGTGGGCAGCACCAACAATAACTATACCTCGCACCCAGAGTCCAAGCGTAAGATCCACGACGACGACAGCACCGCAGCCCTTAAGCGCAGACTGAAGACCATTCACAATAACAACatcaataacaacaataacaatcaCATCGTTTCGAGTGGTCAGCAGCAGGCACAGTCCCAGCGCTTCTGTTGTCCCGTTTGTATTCGCAGTGACTTCCCGAACATGCTAACGCTCGAGAATCACATGGACAAAGAGCATCCTAGCATTCAGGCCAAGTGTCGCTATTGTGAACTTGTGTTCAAGAGCCACAAGGCACTGAACGGACACAAGTGTGCCATTACCGCTCCGTTCCAAAACGGGAGCTCACCTGTGACCCAGGGTTTCGGTGACATGACCTTCGTGGACTTCTCCAGCGACAAATTCCCGCAGATCGCACGTTCGCTGTGCGAGCAGAGTATGCACACGCCGGTCACCAGTCAAAAGTTCGAGTGTCCCAAGTGCTATCGTGCCTTTCCGTGTGGCAGCTCCGTAGAGATTCATGCTAAACACTGTGGCACACCCGTAACCACAGGTGCTGCGACCGTCGGAGCCGAGAGTCCACAAGACTTTAGCATTCGCAAGCGTTTGTCCAGCGAAACGTCCGAGGAGGACGCACGACGCAATGACTTCTTTGCGCATCTCGATCTGAAAACAAAAACCGGTACCAGTGCGTTTAACACGAGCCTCACGGACTCGCATTCGTCTGCGTACGCTTCCGACGAGAAGTCACCGCAGCATCAGCATCACCATCAGCTGGATGACATCAAGCAGGAACGTCACACACCGGTGCCGTACCACCACCACAACTACCATCCACACCAcgacaccaccaccaccagcaccaccaccCCCACCATCAAAGACTTGGCTGACATTCAGTCGATGATCAACATCTCGTCGAGCGGCAGTTTCATGCGTCAGCTAGACAAATCCCTGACCCCGTCCATGAAGAACGACGACGAAGAAGTACAGGATGTCTTCACCTCCGAGTTCCGCAAGATGAAGCTACGCGGTGAGTTCCCCTGTAAACTATGCACTGCAGTCTTTCCGAATCTGCGTGCGCTCAAGGGACACAATCGCATACACTTGAGCAGTGCCGGATCGGGTCCGTATCGCTGTAACATGTGCCCGTACTCGATCCACGACAAAGCAGCGCTGATCCGTCACATGCGGACGCACAACGGAGACCGACCCTACGAGTGTGGCATCTGCAATTATGCATTCACCACGAAGGCGAACTGCGAACGTCACCTACGCAATCGTCACGGTAAGACCACTCGGGATGAGGTGAAACGCTCCATTATCTATCATCCGTCCGAGGACTCCAGCTGTGATGATCCCGTGAAGAAAATGCAAATCTATAATTCTTCCTTTGACGACGACGACATGCTAACGGCACCGAAGGATCGCAGTACGCCTGTGTCGCACTTAAAGGAAATGCTAACGCTGGATCGAACGCCACCAGCCCAAGCGATGGTTAAGATTCAGGTGAAGAGCCTCGATCAGCTTAAGAAGCCCGCCGTGTACGATGACGATGACCTGGACAAAGACATTGAGGTGGTTTCTCTGGGCAGTGCCGGTGGCTATCGTCCGATGGACCTGAGCATGGACGCACTCGATCTTAGCAAGAAAACCACAGTGCCCACAGATAGTAACTATCACAATGAGGACGATGACGATGAAGACGATGATGAGAATGAGGACAACGACGACGAAGAGTCTGCCATGCCGAAAATCGATCTAGCCATGTTCGAGAAGAACCAACAGTTGCTCATTGCCCAGCAGCAGTTTCTCAGCGAAACCTTTCCGAAGATCGATCCGGCCCAGTACTTTCAGTTGTCGCAGCTGTACCGTAATTTTATGTTCCCGAACGGTGGCTTTCCGATGCATCCGCTGTTCCTGCAGAACTCCTTTCTTCCACCGCCGCCACCGATGGCCTCGCAACACGGTGCCAATGAATTCAAAGACTCTTATCCCAAAGACTTGCTACGCAGCACACCAGCGGCGGCTCCACAGTTGGCCTCGCCGATGTTTCCCAGCAATGCAGCTGGTATGATGATGTTTCCATCAGCTGTACCGCCGCAAATGCTTCCGTCACGTCACTCTGGCGGTGGCATGTTGAACATTTCCACCAAGCAAGAGGCACACTCACGACCAGCCTCACCACCACCAGCAGCGGCCAGCAACAGCTCCGCCCAACAGCACATTCCACAGAGCGTTGCTCAGATGCATCACGACTCGTACCAGACCACCGCTGCCACCGACCACAGCCCAGGTCCCGTCAAGATGGTCATCAAGAACGGTGTCCTGATGCCCAAGCAGAAACAACGCCGCTACCGCACCGAGCGTCCGTTCGCCTGTGAGCACTGCTCTGCCCGCTTCACGCTGCGCTCCAACATGGAGCGTCACATCAAACAGCAGCATCCCCAGTACTGGGCCCAGCGTCAGCGGAGCGGTCACAATATTATGCGACGCTGCAGCAACGCCGCCAATCCGTTGACCGTGTCGCCACAGCAGCAACACCACCAGCCACAGCCGATTCCACAGATGCCAACGCAGCTCAGTGCTGCCATCTCGGATCAAGTCAAATACGCAATTCTGGCTCAGCAGCTAAAGAGCCGTGGCGATAAGCACCAGCACCAGCCAGACTACTACATGAATTCGTCCATTGCTCAAAACTATCAATCGATTCATAGTAgcctgaataataataatacaatcagcaataataacaataacaataataatagtaataataacaacaacgaTAGCGTTGACATTGCTCAGGATGATGATGACAACGACTCGAAGCTGGTGATCGATGAGGACAGTGAGCCCGAGGATCTGTCGAGTAAATCTCCGGTGCGTGCGCAGACACCAATTGTGTCAGCGGCAGCATCGCCGAAAACTAGCAACGCAGCCGCAGAGATCAGCGGAGGCGTTAATATGGCCGCCAAGAAAGTCGCAGAAACCATTCTGGAGCATGCGATGCGTAAGAACTGTGCGCCCAGTGGCATCCATCACCAGTCACAGCTGCAGCAGAACGAGGACAAAGATTTCGACCTGAAAATCGCTCCGAATTTAATCGCTCGATCGGAGCACGTGAACAAGTACTTGAAGGACGTGGTTCAAGCGGCCGCAGCCGCAGCAGCCTCGTACAAGGAAGAGTCTGGAGGTGATCTGGTGTCTGTCTCTAAGCTCGTCGATAATGCCACAAATGCGATGAGCTTTGGCAGCTACTTCCGCCCGGATGCTGGCGCACTGCATGAGCACAGTGACGAAGAGGGTCTTGTGGCGTCGGGCAGTGCATCGGAGAGCAATCACTCGGGCACCGAGGACACGGCCGGTCCACAACAGTGCAAGAAGAAGTCCGCCTACAGCATGGCACCGAATCGTGTGTCGTGTCCGTACTGTCAGCGCATGTTCCCGTGGACTAGCTCACTGCGACGCCACATTCTCACGCACACCGGTCAGAAACCGTTCAAATGTTCACACTGCCCGTTGTTGTTCACCACCAAGAGCAATTGCGATCGCCATCTGTTGCGCAAACACGGCAACGTGGAGTCCGCGGTGTCACTGTACGTGCCGATCGATGATATGCCAGAGCCAAAGAAGGAACCCGTGGTCGTCGTTGAGGAGGCAGCACCCGCTCCAGCACCGCCGGCAGTCACGACACGAGCTCAGCCTGTAGCCCCTGCCAGCGCTGCCCCAAGCGTACAGCTTACCATTCCGGTGCTCCGGTCCGCCGAGCCACCGGCGAACGTGAACAGTACCGATCTTCCGTTCAAGTGTCACCTGTGCGACGGATCTTTCACCGAGCGCATGACCTGTCTGGAGCACATCAAGAATCAGCACACCCAGGACTTTGCACTGCTCATGGCCAAGGGTGCCATCGAGGCAGACGCCGATCAGCATATGGCCTCTGCCGCTGAGGACGATGACAAACAAGAGAACCGTGGCAAGTATCCGGACTACGCGAATCGCAAGGTGATCTGTGCGTTTTGTCTGCGTCGCTTCTGGTCCACGGAGGATCTGCGCCGACACATGCGAACGCACTCCGGCGAGCGTCCGTTCCAGTGTGACGTGTGCATGCGGAAGTTTACGCTGAAGCACAGCATGCTGCGTCACCAGAAGAAGCATACGCATCATGCAAACAATCCGATGCACAACAGTGCGTCCGACATGTCGGACGATGAGCAGCCCACGAGCATGGTGGTGAGTAAGATGATGAAGATGCCGGAATTGCTGCCCAAGGAGATGGCAGCGAGTGTGTGGAAGCAACAGCAGCACACTGCCGATCTGCTGAAAGAGAAATTCGGCAAGCACGGTgccaccgctgtcaccactggATTCGATACTTCAGAGCTGATCGGAAACTTGTTGGGCATCAGCGATCAGGGCATACTGAACAAGGTGTTGCTGTCGTCCGCCGATGAGGCTGCCAAGCTGCTGGGCGTAGAAAAGTAA
Protein Sequence: MLTARTNPSTIAGVTTKMERRTSTNSESSVEPMDISGKTSASTDPNSSSMAIKSDHIDSEDNFESDREDLHMTSGGIDATAVTNASATANATATAATAAAAAAQHFVRRENLRQLEASMMIMRKKYRLSMPHKNNNNNLQYSNYDKIENLSRNLHSNTMQSGNFGVIDTDTEMQAFRSASADVKYPCPICDRVSLTQHDFTEHIRSHNNTEDTQNFTCQICFKVLSSASSLDRHVLVHTGERPFTCKFCHVTFTTNGNMHRHMRTHKQRDGGGGGANENYESDASTESSVGSTNNNYTSHPESKRKIHDDDSTAALKRRLKTIHNNNINNNNNNHIVSSGQQQAQSQRFCCPVCIRSDFPNMLTLENHMDKEHPSIQAKCRYCELVFKSHKALNGHKCAITAPFQNGSSPVTQGFGDMTFVDFSSDKFPQIARSLCEQSMHTPVTSQKFECPKCYRAFPCGSSVEIHAKHCGTPVTTGAATVGAESPQDFSIRKRLSSETSEEDARRNDFFAHLDLKTKTGTSAFNTSLTDSHSSAYASDEKSPQHQHHHQLDDIKQERHTPVPYHHHNYHPHHDTTTTSTTTPTIKDLADIQSMINISSSGSFMRQLDKSLTPSMKNDDEEVQDVFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSSAGSGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECGICNYAFTTKANCERHLRNRHGKTTRDEVKRSIIYHPSEDSSCDDPVKKMQIYNSSFDDDDMLTAPKDRSTPVSHLKEMLTLDRTPPAQAMVKIQVKSLDQLKKPAVYDDDDLDKDIEVVSLGSAGGYRPMDLSMDALDLSKKTTVPTDSNYHNEDDDDEDDDENEDNDDEESAMPKIDLAMFEKNQQLLIAQQQFLSETFPKIDPAQYFQLSQLYRNFMFPNGGFPMHPLFLQNSFLPPPPPMASQHGANEFKDSYPKDLLRSTPAAAPQLASPMFPSNAAGMMMFPSAVPPQMLPSRHSGGGMLNISTKQEAHSRPASPPPAAASNSSAQQHIPQSVAQMHHDSYQTTAATDHSPGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHNIMRRCSNAANPLTVSPQQQHHQPQPIPQMPTQLSAAISDQVKYAILAQQLKSRGDKHQHQPDYYMNSSIAQNYQSIHSSLNNNNTISNNNNNNNNSNNNNNDSVDIAQDDDDNDSKLVIDEDSEPEDLSSKSPVRAQTPIVSAAASPKTSNAAAEISGGVNMAAKKVAETILEHAMRKNCAPSGIHHQSQLQQNEDKDFDLKIAPNLIARSEHVNKYLKDVVQAAAAAAASYKEESGGDLVSVSKLVDNATNAMSFGSYFRPDAGALHEHSDEEGLVASGSASESNHSGTEDTAGPQQCKKKSAYSMAPNRVSCPYCQRMFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDMPEPKKEPVVVVEEAAPAPAPPAVTTRAQPVAPASAAPSVQLTIPVLRSAEPPANVNSTDLPFKCHLCDGSFTERMTCLEHIKNQHTQDFALLMAKGAIEADADQHMASAAEDDDKQENRGKYPDYANRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCDVCMRKFTLKHSMLRHQKKHTHHANNPMHNSASDMSDDEQPTSMVVSKMMKMPELLPKEMAASVWKQQQHTADLLKEKFGKHGATAVTTGFDTSELIGNLLGISDQGILNKVLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -