Bcin001579.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- hang
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010000756.1:5475898-5485669[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.00084 0.06 14.2 0.6 3 23 256 277 255 277 0.96 2 24 5.1 3.6e+02 2.3 4.0 3 22 358 377 357 377 0.92 3 24 0.19 13 6.8 1.1 3 21 387 405 386 406 0.94 4 24 0.29 20 6.2 0.8 3 23 448 469 446 469 0.93 5 24 6.2 4.4e+02 2.0 0.2 3 20 482 499 481 501 0.91 6 24 0.0063 0.44 11.4 0.7 3 23 583 604 581 604 0.95 7 24 0.00044 0.031 15.1 0.5 1 23 612 635 612 635 0.97 8 24 3.2 2.3e+02 2.9 0.1 2 23 648 670 647 670 0.89 9 24 0.13 9 7.3 0.2 1 23 673 695 673 695 0.97 10 24 0.025 1.8 9.5 2.4 1 23 700 723 700 724 0.94 11 24 0.058 4.1 8.4 1.4 2 23 813 834 813 834 0.96 12 24 0.1 7.2 7.6 4.0 2 23 854 876 853 876 0.95 13 24 0.0062 0.44 11.5 0.3 2 23 885 907 884 907 0.95 14 24 0.00036 0.025 15.3 0.4 1 23 944 967 944 967 0.94 15 24 0.0005 0.035 14.9 0.7 2 23 1001 1022 1000 1022 0.97 16 24 0.016 1.1 10.1 2.3 2 23 1031 1053 1031 1053 0.95 17 24 6.7e-05 0.0047 17.6 2.6 2 23 1061 1082 1060 1082 0.97 18 24 0.0099 0.7 10.8 2.9 2 23 1118 1139 1117 1139 0.96 19 24 0.016 1.1 10.2 0.0 1 23 1183 1205 1183 1205 0.93 20 24 0.0018 0.13 13.2 0.1 2 23 1241 1263 1241 1263 0.91 21 24 1.2 88 4.2 0.1 2 23 1288 1309 1287 1309 0.94 22 24 1.7e-05 0.0012 19.5 0.1 3 23 1323 1343 1323 1343 0.98 23 24 0.00028 0.02 15.7 1.0 1 23 1519 1541 1519 1541 0.97 24 24 1.6 1.1e+02 3.8 0.8 2 23 1608 1630 1607 1630 0.94
Sequence Information
- Coding Sequence
- ATGTCGTCGCCGTTGTTGCCGTATGCCGTCGTCATTGTGCAGGGTGCCACACAGGTTCTGGACGCAGAGATCTGCGTTTGTGCTTTTACTTCTATCCAACAAGCCGATCGCCTTTCCGCACGCATATGTCATGCGTGCGTTAGCTACCTGAACTCATGGCAAAGCTTCAAGAATCGATGCTATGCCTCGCAGAAGAAACAACGCGGTCTGCTGGAGATGTGGATGGCCAAAGAGAGAGCTCGTCAAAAGATGGGGGGTTCCCAACAGCAGCAACTACCGCAAAACGCGTCGGTGGAGTCGATAAGTTTGCAACGCCAAAGACAGCTGGATCACCAAAGAGCCCAATTGCAACAGCAGCGTATATTGAAACAAGCCCTGAGTCAACCTACTTCAAACTCGAGTTCTTTAAATAAGACCGCAGATGTAGATGTCAGCTTTATAAAATCAGAGCCCTTGGACGCACCGCTTGAGGACGAAGATTTCGAAGAGCAAAACGGCGCCGGCGATGATGATGTCGATGAAATGGATCCCACACAGTTTCTGGCACGTGACGATATGGATGAGGACGATGGTGGCGTTGATGGCGTAGCGGTTCCCTTTGAGGACGGACCACCGATTCTGACCTCACTCGGTCTAACACACATAAATCATAATCCCGACACCGATATCGATCAGTCCATGGCCGAAACAGACGATTCAATGTTTTACACATCCCTACAGGACGCCTCGACACCACGACGTCTCGGTCCACCACAGCAGGCTGCCTGCACAATTTGCAACATGAAATTCTCGAATCGAGCAAATGCCCGTCGTCATGAGCGCAACATTCACGGCAAGAAAACCAGTTCAATGATGTCCAGCAGTATGCCCGCCTCAATGTTAAACCATCACAATCAAATCTCAATAAATGCACCGCTACGACCACGTCTACAGGCCATCCTGGCCAAACGTACCGTCGCACAGTTGTACGACTACACGCGACCCGAACAATACCGTGAACTTATCACCGACACGAAGTTGCATTTCATTAAGCGGCACATTGATTTCCTCGAACAGTACCAGAACATGCACTGCACATGCTGTGACAAAGACTTCCCCACCTATAAGTTCTTTATGCTACACATGCGTAAGAAATACTCGACACTGTCACGAAATCTCTGCTTCAAGTGTCTGAAGCAGTTCGAGACAAAGAGTCAGTTTATTGGTCACCTGAAAAAGAAGAACTGCATTAATCTGTATAAAGTGTACTGTGCCGATAGTACGATCTCCAAGGAACCATTACCACCGACACCGTCTAGTCGTGTGGGCACCAAAGAGGTTATCGCCAACAAAGTGTACGGTTGCAAACTGTGCAAGAACACATTCCGACTGAAGGTCGACTATCGTAATCATGTGTTTATCGATCATGCCGAAGAGCTGAAAAAGGAAACTTTGGGCCCATCGTGTGGTTTCTGTAAGGCAGAATTTGAGGATCCCGCATTGCGAAAGCGTCACTTTAATAATATGGAGTGTATAGTGTTTTTGATATGTGGAACGTGTGAGGATAAATTCGATAATCTGGCACAGTACATTGAACATGTGTATGCGGCTCATTTGCAGCCACCCGCAGCATTGTTTGCGGGTAACGGATCCAGTGTAGCCGCTGTGCCATCTACACTGAGTGATGATAGTGCCATGTACAGTTCAGGCGGTGAGTACGATCCCATGTCACCAGCCCAACAGGCACGCATGCGTAATCCACAGAATTGTCGTGTGTGCGGTAAACTGTACAATAACTACTATAATGTACTGCGACACATGGAGTCCAAGCATCCCGATCAGATGCCCAGTACGTATCGTTGTGAAAAGTGTTCTACCGGTTATCCGCGTCAGGTGGAACTGCGTGATCACATGTACAAAGAGCATGGCATTACACTGCCGAAGATCAAGCGTGAGTTCTTGAACTGTCGCATGTGTGGCACAATGTCTGAGAATCGTGAGATGTGGCTAGAGCACCAGGCCGGCACACACTTAAAGTTCTATTGTAATCTTTGTGAATTCGAATCCGAAAATAAGGCAGAGTTCGAGATTCACTTGAACGAACATCAAACTACGAAGTATACCTGTACCATTTGCCAGCATGCCTTTAATTCGGAGCGAGGCCTTGTTACGCATTTCTCTGTGATGCATCACATTAAAAAGGAAGAGATGCCAGCTGAAACGGATGAAGGTGAATTAGAGAATAGTTTTGAGTATCCACAGGCAATGCTAGAGCCCAGTGTTGATGTTCATGTGAACGGTGACACCGAAGATGAGGCAAACAATCATACAATGACAAATGGAGATGAAAATGAAGATTCTGGTGATGATGGTGACAACGATGAAACCCTGCATCCACAGCAAAGCAAGAAACGAAAACTAGAGACAGCCGAGAGCATTGCTGAGAGTAAACGTAGACAGTGTACGGTTTGTCATGATTGGTTCACAAACACTGCTGCCCTATCGAATCACATGCGTACACATTCGACGACGTCGTTTGTCGGTGCCCACGGTCAGAATAAACATGCCACCAGTCGTATGCGTTGTCGCATCTGTCAGAAgcgtatacacacaaaacagaGCTACAAGCGACACATGCTAAACGAGCATCAGGTCAAGGACTGTGTGTTCATTCGATGCAAACTGTGTCCTGCTGAATTCAGCAATGACAAAGGTCTAAAAGTGCATATGTTCCGTACGCATAATATTACCGTGCAGCAAATGCAACAGGACGAACGATTGCGTCCGATTCCGAAAAAGGAGTCCACCACTCCGACACCGATATTGCCAAAGATTCTGCCGAAGCTCATATACGAATGTGACATTTGTCATACGGTCTACAGGAATATGGAACAACTGCGGGCACACAAGGACGTTGTACACGGTCCCGAAAGtAATGCCACCACTCCACTAGAATCATCGTTTGCAAATACAACCTACGATGATGGTCTTGAGCCAAAATCCCTCACCGAAACCTGGTGGCAGTGCCGGTACTGCGATGAAAACTTTAATGCCAGCAAGAAGCTAACCATTCACATGAACTCGCATCAGGAGCACGATAACACGAACAACTCGTGCAAGGATTGCGGAAACATGTACGCATCACGTAAATCCCTGTGGGTGCATCGTCACAAGAAGCATCCGCGTCATTCAAATCCATCGTCGTGTGAACTGTGCGACAAAGTGTTCTTCGACAAAACCGAACTGTTCCATCACTTGAAGACACACTCCACTTCGGAAGTGTTTACAAACTTACAGGATATGCATTTGCAGCTAGAAGAAGAGCAAGACAAGCAACAACAGCAGATGAACAGTTTTGTGGATGAGGATATGTCGTGTCATCTGTGCGGACAGAAGTTCTACGATAAGCGTGTGATGAGCAAGCATTTGCGATTGCATGAGACTGGTCAGTTGGCGAATAGTCCACTCGAGGCTATGCTGGCGGATAGTACGATTAAACTAGAGGAGAACGGTGCTAGTGATAGTTACAGTTTTCCATCGTATCAAGGACAAATGGTGGACGGTGAATATGCGTGTGATATGTGCCCGAAAACGTTTCCGCTGATCAATGCACTGAAAGTACATCGTGGCTGGCATTTCAGAAGTCCGGACGGACGACAGGTTACGGATCCGGATAATATGTGGCAGCCCGATTCGATACCGGCGAGCAAAGGACGTAGATCGCGTGCATCTAATCCGCCGGTGTGCCCATACTGTAATTCAACGTTTGCTAGTGGTAACAATTTGCGACGACACATTGTGGAGGTGCACAAGCGGAACGAGGCGAAGCTAATGCGTGAGAATGGCACGGTCAGTGAGTCAGTGTACGTGGAAAAGGAATTGCAGTGTTTGGCGTGCTCGATCACGTTCAACACTCGTGTGGAGTGGGTGGATCACAAGATATCGCATGCACGCACAATGAAACCGTCCACAACGTTTGAGTGGGGCTGTGAGATTTGCGGTAAGGTGTTTACACGCAAGGAACGGCTACTGGCGCATATGGTCGTGCATATTAATGGCAAAGAGGAGGATAGCCAGCAGAATAGTGAGATGGGCGGTGAGAGTAATTCGCGCAGTTCGATTTCGTCGCAGTCACACTCGCAGCAGTCCCAAGAATCAACGTCGGTGCATGAGCAGCTGAAGAAGCAGCTGCAACAGCAGATTAAGCAGCAACAGCAGCCAAGGCATAAGGTTGGCGATGAGGAGGACGAAGAAGATGTTGAGGACGAAGACGGCGAGGATGGTGCAGAGGAGGATGTTGAGGAGGACGACAACGAAGAGGAGGTTGAAGAGGATATCGAAGACGAAGATGAGATTCCCGACGAAGATGATGATGAACCCGAAGAAGTTGTcgacgatgatgatgaagatgataatgatgaagtaattgatgatgatgaagaagaCGAAGACGAAGTCATCGAAGACGATGAAGATGTGATCGATCACGACGAACAAGTTGTCGAAGAAGTTGTAGTTGGTGATATTGATTGTGATGATATCAAAATTGAACAACAGGAACCGGTGGCGGCAGCCTACTCGTGTGACCTGTGCCAGGTATTCTTCCGCACTGCAAAGGAACTGCGCCGCCATGTTACCAGTCACATTCTGACGGAAATCGGTGGTGGTGATGCGTCGTCGTCCAGCGCTACAGCTGCTGAACCAACACCACCAACACCACCACCCGCACAACCAGCAGCAACGGTTCTGGACGGATTCAAGTGTCGCCTGTGTGGTTCGAGCAGTGTGTCACATCTGGGAATGATTCAGTGTATGGAAAATCACAAGATCGCCACAAGCTTACGGTGTGCCGAGTGTCAGATGTACTTTGCAGACGTGAAACAGGTGCTGCAGCACGAGCGGCTGTGTCATCCGAAAATGGAGATAGACGACGAATAA
- Protein Sequence
- MSSPLLPYAVVIVQGATQVLDAEICVCAFTSIQQADRLSARICHACVSYLNSWQSFKNRCYASQKKQRGLLEMWMAKERARQKMGGSQQQQLPQNASVESISLQRQRQLDHQRAQLQQQRILKQALSQPTSNSSSLNKTADVDVSFIKSEPLDAPLEDEDFEEQNGAGDDDVDEMDPTQFLARDDMDEDDGGVDGVAVPFEDGPPILTSLGLTHINHNPDTDIDQSMAETDDSMFYTSLQDASTPRRLGPPQQAACTICNMKFSNRANARRHERNIHGKKTSSMMSSSMPASMLNHHNQISINAPLRPRLQAILAKRTVAQLYDYTRPEQYRELITDTKLHFIKRHIDFLEQYQNMHCTCCDKDFPTYKFFMLHMRKKYSTLSRNLCFKCLKQFETKSQFIGHLKKKNCINLYKVYCADSTISKEPLPPTPSSRVGTKEVIANKVYGCKLCKNTFRLKVDYRNHVFIDHAEELKKETLGPSCGFCKAEFEDPALRKRHFNNMECIVFLICGTCEDKFDNLAQYIEHVYAAHLQPPAALFAGNGSSVAAVPSTLSDDSAMYSSGGEYDPMSPAQQARMRNPQNCRVCGKLYNNYYNVLRHMESKHPDQMPSTYRCEKCSTGYPRQVELRDHMYKEHGITLPKIKREFLNCRMCGTMSENREMWLEHQAGTHLKFYCNLCEFESENKAEFEIHLNEHQTTKYTCTICQHAFNSERGLVTHFSVMHHIKKEEMPAETDEGELENSFEYPQAMLEPSVDVHVNGDTEDEANNHTMTNGDENEDSGDDGDNDETLHPQQSKKRKLETAESIAESKRRQCTVCHDWFTNTAALSNHMRTHSTTSFVGAHGQNKHATSRMRCRICQKRIHTKQSYKRHMLNEHQVKDCVFIRCKLCPAEFSNDKGLKVHMFRTHNITVQQMQQDERLRPIPKKESTTPTPILPKILPKLIYECDICHTVYRNMEQLRAHKDVVHGPESNATTPLESSFANTTYDDGLEPKSLTETWWQCRYCDENFNASKKLTIHMNSHQEHDNTNNSCKDCGNMYASRKSLWVHRHKKHPRHSNPSSCELCDKVFFDKTELFHHLKTHSTSEVFTNLQDMHLQLEEEQDKQQQQMNSFVDEDMSCHLCGQKFYDKRVMSKHLRLHETGQLANSPLEAMLADSTIKLEENGASDSYSFPSYQGQMVDGEYACDMCPKTFPLINALKVHRGWHFRSPDGRQVTDPDNMWQPDSIPASKGRRSRASNPPVCPYCNSTFASGNNLRRHIVEVHKRNEAKLMRENGTVSESVYVEKELQCLACSITFNTRVEWVDHKISHARTMKPSTTFEWGCEICGKVFTRKERLLAHMVVHINGKEEDSQQNSEMGGESNSRSSISSQSHSQQSQESTSVHEQLKKQLQQQIKQQQQPRHKVGDEEDEEDVEDEDGEDGAEEDVEEDDNEEEVEEDIEDEDEIPDEDDDEPEEVVDDDDEDDNDEVIDDDEEDEDEVIEDDEDVIDHDEQVVEEVVVGDIDCDDIKIEQQEPVAAAYSCDLCQVFFRTAKELRRHVTSHILTEIGGGDASSSSATAAEPTPPTPPPAQPAATVLDGFKCRLCGSSSVSHLGMIQCMENHKIATSLRCAECQMYFADVKQVLQHERLCHPKMEIDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -