Bcin002105.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bolitophila cinerea
Gene Symbol
Znf711
Assembly
GCA_010015015.1
Location
JAAAKO010000756.1:11522266-11524746[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.035 2.5 9.1 0.3 1 23 27 49 27 49 0.96
2 21 0.014 0.96 10.4 1.0 2 23 56 78 55 78 0.95
3 21 0.0018 0.12 13.2 0.3 1 23 84 107 84 107 0.97
4 21 0.00026 0.018 15.8 4.4 1 23 114 137 114 137 0.97
5 21 0.015 1 10.3 5.3 1 23 141 163 141 163 0.99
6 21 1.2e-05 0.00086 20.0 0.2 1 23 169 192 169 192 0.92
7 21 8.5e-05 0.006 17.3 0.3 1 23 201 223 201 223 0.97
8 21 0.02 1.4 9.9 0.0 1 23 229 251 229 251 0.98
9 21 5.2 3.7e+02 2.3 2.0 1 19 331 349 331 353 0.86
10 21 7.6e-05 0.0054 17.5 4.2 1 23 391 414 391 414 0.97
11 21 1.2e-07 8.2e-06 26.3 0.6 1 23 420 442 420 442 0.99
12 21 0.0012 0.084 13.7 4.6 1 23 448 470 448 470 0.98
13 21 0.0037 0.26 12.2 2.0 2 23 476 497 475 497 0.98
14 21 0.00017 0.012 16.4 0.0 3 23 505 526 504 526 0.96
15 21 5.6e-08 4e-06 27.3 1.2 1 23 532 554 532 554 0.98
16 21 1.3e-05 0.00091 19.9 2.7 1 23 560 582 560 582 0.97
17 21 1.8e-06 0.00013 22.6 0.8 1 23 588 610 588 610 0.99
18 21 1e-05 0.00071 20.2 0.5 1 23 616 638 616 638 0.98
19 21 3e-05 0.0022 18.7 6.1 1 23 644 666 644 666 0.99
20 21 1.2e-06 8.2e-05 23.2 1.9 1 23 672 694 672 694 0.99
21 21 0.00077 0.055 14.3 1.4 1 23 700 722 700 722 0.98

Sequence Information

Coding Sequence
ATGCGATCGTGTAAAACAACATCTCGTAATTCAAAGAAAGACGACAAAAAATCTCCAAATCTTACCGCAGAGAAACACTTCAAATGTAAAAGCTGTAACCTAGCATTTAGCGATGAGCCGTCCAGGATAGACCATGAGAACAGCCATGATCTGAATAGCGTTCAATCGTGCCTTATCTGTAGAAAACAGTTTGAATCCGTTAATGAATTACATGTGCACATGAGCATTACCCACAAACGCATGAAACCCTACAAATGTGAGTACTGTGCAAAGAGCTGGTCACAGAAAGACACGCTGGACGTGCATTTACGATTGGAGCACCTCAATTTAACGAGTCCGTACAAATGTACGACAtgtactttttgttttaaaagtgaTTCAGAACTAACCGATCACATGAAAGAATCACATGGAAAACCATATAAATGTAGTCACTGTGTCAAGTGTTTTGGCAACATAACCGAGCGCATAAAACACGAGCGCACACATTCCATGGAACGCCCATTTCAATGTAACGATTGCGACGAATCTTTCTCTCTGCAATCTAGTCTACAGTTGCACGTGAGTGACGTGCATGATACGCAAGCAGCGGATCGTCCGTTCCCATGTGCTCTATGCGAGCACACATTCGATCAGCCCAGTGATCTTACAACTCATATTTATGTGCACCTTGATGAGAGTCCGTTCGAGTGTCCCGATTGTGCTGTACTTTACGAGGATCTTGACATGTTTGTGGAACACATGCAAACACATGAGAGTCCACCCACGGCTGATAATAATCATACATCGTTTTTACCAATGAAAAAAGAAATAGACGATGTAAATCTAAGTGTGACCGATTTAAAATACGATTCGCATGCAAGTTCGGACACTGATAATGACAGTTTTATGGATAGTTTTGACATTACATCTAATTCACTGCCAGCGAATCCACCAGAAAGCAGTCCAACTATAAAACAAGAACTGGACACATTGGGCGTCACAATCAGCTTTAATTGTCCGACGTGCAAAGCGCAATTCTTCGACGTTGCACTGTACAACAGTCACTGCGAATCTCATGCCATTGAAACAACACAAAAATCCGTGCCTTTGCGTAAAACTGAAAAACCAAAACGAGTACGCACTGCTGTTTCGTGTGATTGGCAGAAACTCGACAACAAGGTTCGCAATTTCTCTTGCAAACTATGTGATAGACATTTCACCAGAGCTTCCACGTTAACGTTACACAATCGTCGCACGCATCTCGGTATCAAACCGTACAAATGTAAAGTGTGCGAATGGCCGTTTGCTCAGTCCAGCGATCTCAGTAAACACATGAGAAAACATACCGGCGAGAAACCGTATACATGCGATTGTTGTAAGCTTACATTTTCTCAGATGCGCAATCTCAAGAATCATATGAAAATTCATTCGGATGCACCGAGCAAATGCAAATACTGTGCTAGAGTATTTCAGCTGGAGACAAGTTTGAAGCAACATCTCAAGAAACATGAAGGTGACGGAGCTGCTCCATGTGATCAGTGTAATATACCTTTTGTAAATCCAGCTGAACTAAAGATCCATATACAACGTAAACACCCGACAGCCAAATCATTTCCTTGTAGTGTTTGTGGCAAGACCTTTTCGAAATCCTACGAGGTACAAAAACATATGCGAACTCATTCaggTGAACGTCCTTTTGCTTGCAGCCTGTGCACAAAAACCTTTTCACACCAGACCAGTCTAAAAAATCACCAAGCTGTCCATACCGGTGAACGACCGTTTCAATGTTCTACCTGTGGAGCATCATTTTCGTTCTTGGGTAATCTAAAGatacacacacgaacacactcCGGTGAACGACCATACGAGTGCAAAGTGTGTTTGAAACGTTTCGCTCGTTCGGCCAATCTAAAGGAACACGAAAAAATACATACTGGCGAGAAACCATTCAAATGTGATGTGTGCAATCACTCTTTTACGAGCTCTTCCACGTTCTCTAAACACAAACGAACACACACTGGTGAGAAACCCTTCAAATGTACGGTGTGCGACAAAGCGTTCATTCAGTATGCTCACCTCACAAATCATACACGCATTCACACCGGTGAGAGACCGTACATTTGTTCAGTGTGTCAAAAAGGATTCTGTCGGGCGGATATACTGTCTAGTCATCTAAAGACACACCAGAAACATAATACAGCCACGAATGTCAGTCGAGAAGATGTATCACTACAGCCCAACAATACTCCCGTCGATCTTATGAATGAAATATCAGAATTTGTGAAGCCAATGGCAACTGTAGCGTCCACATCTACACAATACAATCAAATTCATCCGCAAATCTCGTACACAATTACCACACCGGACAGTATCACAAATGTAACATCCTACTTTGAAGCTAAGATtgataattacaattattga
Protein Sequence
MRSCKTTSRNSKKDDKKSPNLTAEKHFKCKSCNLAFSDEPSRIDHENSHDLNSVQSCLICRKQFESVNELHVHMSITHKRMKPYKCEYCAKSWSQKDTLDVHLRLEHLNLTSPYKCTTCTFCFKSDSELTDHMKESHGKPYKCSHCVKCFGNITERIKHERTHSMERPFQCNDCDESFSLQSSLQLHVSDVHDTQAADRPFPCALCEHTFDQPSDLTTHIYVHLDESPFECPDCAVLYEDLDMFVEHMQTHESPPTADNNHTSFLPMKKEIDDVNLSVTDLKYDSHASSDTDNDSFMDSFDITSNSLPANPPESSPTIKQELDTLGVTISFNCPTCKAQFFDVALYNSHCESHAIETTQKSVPLRKTEKPKRVRTAVSCDWQKLDNKVRNFSCKLCDRHFTRASTLTLHNRRTHLGIKPYKCKVCEWPFAQSSDLSKHMRKHTGEKPYTCDCCKLTFSQMRNLKNHMKIHSDAPSKCKYCARVFQLETSLKQHLKKHEGDGAAPCDQCNIPFVNPAELKIHIQRKHPTAKSFPCSVCGKTFSKSYEVQKHMRTHSGERPFACSLCTKTFSHQTSLKNHQAVHTGERPFQCSTCGASFSFLGNLKIHTRTHSGERPYECKVCLKRFARSANLKEHEKIHTGEKPFKCDVCNHSFTSSSTFSKHKRTHTGEKPFKCTVCDKAFIQYAHLTNHTRIHTGERPYICSVCQKGFCRADILSSHLKTHQKHNTATNVSREDVSLQPNNTPVDLMNEISEFVKPMATVASTSTQYNQIHPQISYTITTPDSITNVTSYFEAKIDNYNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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