Bcin001666.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- bab1
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010000756.1:6502419-6505021[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-11 2.2e-08 34.0 0.0 1 45 359 403 359 403 0.92 2 2 0.02 41 4.3 0.8 4 20 503 518 502 518 0.93
Sequence Information
- Coding Sequence
- ATGGGAGGCATTGAAGGTCAAACATATTGTCTGCGATGGAACAATCATAAGTCAAACTTGGTTGAAATCTTGGAAGTACTTATAAAACAGGACACATACGTTGATTGTACGATATACTGTGATAGAAATGGACGATTTAATGCACACCGGGTCGTCTTGGCAGCTAATTCACCATACTTTCAGTCAATCCTTCAAGAAGTACCAATGGATCATTGCAGTATACATGTACCTGGTGTGGAGCCCTTCGAAATGGAGGCACTCATTGAATACATGTACACTGGTGAGGTAAATGTGCCACAATCACAGATTCCACGAATTATGAAAATCGCAGAACAGCTTGAGGTAAAAGGACTGTTTGACATGAACGATCTACGTGAGAAATTCGATCACAGCAAAATTGAGGACACCCAGCATTATACACACAACAGTAATGGCGGCACAAACAAACCATCCGCAATTAATAATCAATCCTCTCCGATTATATCTACATCAACAAATGTAACGTCAGCACGTAGCAATAGTACATCACCAACGTATAACAACTATAATACGACGCCTTATTCAAACATGTTCTCACCAACACAAGTGCCTTTGTCAAATGCTTCAGAGCGACCACATCAGTGGCCTATGTCCTCTCCTTTGGcaccaccacctccaccacAACACCTTCAAAATGCTGCAGCTGCTATGCTTAGTTCTGTATACGAATCTGGATCAGATATGAATCCGCTTAAGCGCAAGAAGTTATCATCGATCTCTAGCATGCTTATGTTCCGCGATACCCCGATTCTACGCAATGTTCTAGCTCAAACCACAGCTGCGGACTCGTCTCAAACTGTTCCCCAAGTATGTGCATCCGTAAAGAATGAACGTAACGAAAGACAGAGCACACACTCGAACGGTACCGACTACTCCGATAAGaaaataagaTATGACGAACCCCATTCTCCGTTCACGGATAAATCCTTTGAGGATGACGCTATGGACTCATCAAATAATTACTCAAGCGCAGACTCACGCATCGCATCTTATGTTCCCCAACAGAAACCCGAATGGAAGCGCTATAAGCAGTACACTCGGGCTGACATTCTCTCTGCCATTGAGTGTGTAAAAAATGGTATGAGTGCGTTACAGGCATCACGTAAATTTGGCGTGCCATCTCGTACTTTATACGATAAAGTTAAAAAGATGGGTATTACAACGGGACGACCACTAAACCATCGTTCTGCGAAACGCAGTCCATCGAATTCTGATAGTCCGGCTGCATTCCCGTATGGTCTTAGTGGCACAAATAGTCCGTATTCACATCACGAGAATAACCCTGCAACAATGCATAGTCGCCGTTCCGAGTCACCAGATCGTGAGACTGAAATCAAACGAGAACATAAACACATGCAACCAACAATTCCGCATCCTGCTGCTGCTTTACTCGAGGCCACGTTCTTGCAGCAAGCTTTCGAAGCTCGCGGAGGTGACATTGCTGGCCGAGAAGCACTTCATGCCATGGCATTTGCAGCAGCCGCACATGCAGCTGTAAATGGAATGTCCACAAGTCCTGGTACCCATGGAACAGCCCGATCACCAAGTCCAAATGTACTCATGAAATACATGCGAGTACCTGCTATTCCTTCGCCGGATGACCAGCACTTACCTGTACAGACTAGTAATGATTCAGAGCAGCAGATTGAGATAGATGGAAACGAAGATCGTGTCGAAGATTTATCGATGTGCAAAAGTAATGGTGCGTCCGCGGACGCAAAACAACAACCAGGTGTAATTGTGATGCCTATTACCACTTTAAATGATGAAGAAGAcccaaaaaatgtatccaaaattCGAGAGATATCGATAGAAGAtgcataa
- Protein Sequence
- MGGIEGQTYCLRWNNHKSNLVEILEVLIKQDTYVDCTIYCDRNGRFNAHRVVLAANSPYFQSILQEVPMDHCSIHVPGVEPFEMEALIEYMYTGEVNVPQSQIPRIMKIAEQLEVKGLFDMNDLREKFDHSKIEDTQHYTHNSNGGTNKPSAINNQSSPIISTSTNVTSARSNSTSPTYNNYNTTPYSNMFSPTQVPLSNASERPHQWPMSSPLAPPPPPQHLQNAAAAMLSSVYESGSDMNPLKRKKLSSISSMLMFRDTPILRNVLAQTTAADSSQTVPQVCASVKNERNERQSTHSNGTDYSDKKIRYDEPHSPFTDKSFEDDAMDSSNNYSSADSRIASYVPQQKPEWKRYKQYTRADILSAIECVKNGMSALQASRKFGVPSRTLYDKVKKMGITTGRPLNHRSAKRSPSNSDSPAAFPYGLSGTNSPYSHHENNPATMHSRRSESPDRETEIKREHKHMQPTIPHPAAALLEATFLQQAFEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRVPAIPSPDDQHLPVQTSNDSEQQIEIDGNEDRVEDLSMCKSNGASADAKQQPGVIVMPITTLNDEEDPKNVSKIREISIEDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210908;
- 90% Identity
- iTF_00210908;
- 80% Identity
- iTF_00210908;