Bcin002287.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- ttk
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010000756.1:13542254-13545367[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-17 1.3e-13 50.7 0.0 2 45 490 534 489 534 0.95
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAGTTTTGTTTGCGCTGGAATAATCATCAGCCGAATTTCATATCAGTGTTTTCATCGCTTTTGCACAATGAAGCTCTCGTTGACGTCACACTAGCTGCAGAAGGAAGACAACTGCAAGCCCACAAAGTTGTCCTGTCTGCGTGTAGTTCGTACTTTCAGTCTTTATTCACGTCGAATCCTTGCCAACACCCGATTGTAATACTAAAGGATGTCCAATATAATGATCTAAAGACTATGGTAGATTTTATGTACTATGGCGAAGTTAATGTATCCCAAGAACAGTTGCCACACATTCTCAAAACGGCTGAGATGCTAAAGATTAAAGGTCTTGCAGAGATGCCCGATCCAGCAACCCTAACAAAATCCGAAAATAAATCACCAGTGCAACCCGACAATAATACGGCTGCCAATACCAGCAACACCGGCGGCGAATCAATGTGGGGCAGTGATAATCAGCAACAATTTcatcaacagcaacaacagcaacagcagcagcagcaacaacaacaacaacagcacgGTCAGCAGAGAAGAACTCCGTCACCCGGAGCTATGTCACCATCGGCTGCACGCCGGAAACGTCTTCGTAAATCTTCAACagGTTCTGGATCCGCTTCAACTGAGCGAGCCTCAGAGGAGCACAGTAGCATCGAAGGACCAATCGGTTTGAATATGTCGCAATCGCAAATGGATCAAATGTCCGCATTTGCACAAGCACCCACAAATCTATCGTCCCAAGGAATGTCGAATACTAAAAAAGAATCTTGTGGTAGTGCTGATGAAATGCCACAACACGACTCTTCTCAGGAAAGCGTTGAGGACGTTCATCACAGTCATCACCACATCCATCAAAACgtcattCCTTTTTTCAAGAAAACTGATGTTGGCGACCTCTCAGCTATGTCGCAGCAGATGCCCATTGACATCACAAGTCCGACGACAACATCTGAGCACGGTTCTGCAGTAAGTTGCCCCCAGTCGCAACCATCACATTCAGGTGTACAATGGACCGTAGTCGACTCAAACTATCCAAGGTTTGCGTTGTCATCCTGCCAAACGAACGTCGGTGGTATGTCATCTGCTGGTCACAGTAATCCCAACGAGAGCCAGCACAGTTCAAGTACGACCTCAGCTAACTCGGCGGCCTCATCGACGCATGGGCACAACATGCACtccggtggtggtggtggtacaGGCGGAGGCAACGGTGGTGGCAGTAGCTACCAaagcggtggtggtggtggaccCTCATCGTATTCACCACAGATAATTTCTGTTAATCCCAGTAACTTAGTAAATAACTATCCACCGAGCCTATCGACGCCAACATCACCGCAAGGAAACTCAAATATGGTACAGTCTGTCTACAGTCAAGGACCTACACCGAATCAGTCACCggCAGGCTCTCAAACACCAACTACACAGAAAAGGAAGCGTTCAGTGAATCCTCAGGGTGACGAAAACTTCTTGCGAGCATTGGAGGCTGTACGCTTCGGTGGAATTGGATTCTGTAAGGCTGCTCGCATGTATGGCGTTAACAATAGAACACTTTGGCTGGAGTACAAAAAGCGTGGCTATCCAATAAGTCGACCGAGCattaaaaatcgtataaaattAGAGCCAAACATGACGCCACCGCCGGCATCTACGCCAACCAACGAGGATAATACATCAATGGAGACCTACGATCACATGTCACAGTCGTCACTGAATATGTCGGCACCACCGCCGGCTGATGCACCCACATCGCTTATGTGTCCACCGCATGCACACCCGATGGGAGTCATGAGTTTTCTGGACACGCGACACGTTGAATTTGCACCAGGCATACATCCGATGGCACGTCAACGGTTTCCTGATGGAGCCGTCAATGTGAATCCATCGGCAATGAACTTGCAGGGTTTAAATTTTAACTCGATGTAA
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVFSSLLHNEALVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDPATLTKSENKSPVQPDNNTAANTSNTGGESMWGSDNQQQFHQQQQQQQQQQQQQQQQHGQQRRTPSPGAMSPSAARRKRLRKSSTGSGSASTERASEEHSSIEGPIGLNMSQSQMDQMSAFAQAPTNLSSQGMSNTKKESCGSADEMPQHDSSQESVEDVHHSHHHIHQNVIPFFKKTDVGDLSAMSQQMPIDITSPTTTSEHGSAVSCPQSQPSHSGVQWTVVDSNYPRFALSSCQTNVGGMSSAGHSNPNESQHSSSTTSANSAASSTHGHNMHSGGGGGTGGGNGGGSSYQSGGGGGPSSYSPQIISVNPSNLVNNYPPSLSTPTSPQGNSNMVQSVYSQGPTPNQSPAGSQTPTTQKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNMTPPPASTPTNEDNTSMETYDHMSQSSLNMSAPPPADAPTSLMCPPHAHPMGVMSFLDTRHVEFAPGIHPMARQRFPDGAVNVNPSAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210891;
- 90% Identity
- iTF_00210891;
- 80% Identity
- iTF_00210891;