Basic Information

Insect: Blattella germanica
Gene Symbol: stc
Assembly: GCA_003018175.1
Location: PYGN01000208.1:556035-594568[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.8e+04 -4.2 1.6 15 19 418 422 417 422 0.81

2 13 0.33 4.7e+03 -1.6 0.3 4 10 451 457 450 457 0.91

3 13 8e-07 0.011 16.3 13.3 3 18 469 484 468 485 0.93

4 13 3.7e-05 0.52 11.0 11.7 1 19 521 539 515 539 0.92

5 13 5.8e-09 8.2e-05 23.2 12.3 1 18 579 596 579 597 0.97

6 13 6e-07 0.0085 16.7 12.4 4 19 644 659 637 659 0.89

7 13 1.4 2e+04 -3.7 2.0 5 10 688 693 688 693 0.93

8 13 0.0058 82 4.0 9.8 1 11 699 709 699 721 0.81

9 13 1.8e-10 2.6e-06 28.0 13.4 1 19 726 744 726 744 0.98

10 13 1.5 2.1e+04 -3.7 1.0 6 10 773 777 772 778 0.77

11 13 2 2.8e+04 -6.9 13.0 10 19 791 801 780 801 0.79

12 13 9e-06 0.13 13.0 15.0 1 16 837 852 837 863 0.84

13 13 3.1e-07 0.0044 17.6 15.0 1 19 869 888 869 888 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.8e+04	-4.2	1.6	15	19	418	422	417	422	0.81
2	13	0.33	4.7e+03	-1.6	0.3	4	10	451	457	450	457	0.91
3	13	8e-07	0.011	16.3	13.3	3	18	469	484	468	485	0.93
4	13	3.7e-05	0.52	11.0	11.7	1	19	521	539	515	539	0.92
5	13	5.8e-09	8.2e-05	23.2	12.3	1	18	579	596	579	597	0.97
6	13	6e-07	0.0085	16.7	12.4	4	19	644	659	637	659	0.89
7	13	1.4	2e+04	-3.7	2.0	5	10	688	693	688	693	0.93
8	13	0.0058	82	4.0	9.8	1	11	699	709	699	721	0.81
9	13	1.8e-10	2.6e-06	28.0	13.4	1	19	726	744	726	744	0.98
10	13	1.5	2.1e+04	-3.7	1.0	6	10	773	777	772	778	0.77
11	13	2	2.8e+04	-6.9	13.0	10	19	791	801	780	801	0.79
12	13	9e-06	0.13	13.0	15.0	1	16	837	852	837	863	0.84
13	13	3.1e-07	0.0044	17.6	15.0	1	19	869	888	869	888	0.97

Sequence Information

Coding Sequence: ATGGCCAGCTGGAATGGTTCTTTTCCAGAAGATGAAAATATCCACAATTATAACTATGTCACACCTGCATATGCTGATAATAATGTGCAATCGTATCCAGCTAATTGGGCATATTACCCTGTATCAACAGTTCCAGATCACCAAAGTACTGTCGATGGCCTACAGCAGTTGCATACGCCAACTTTCACAAATCAACCGgtccaaacaaattttaatattgcTGCACCTCCCCAGTTTGTGAACTTGTCTCAACGATTACAAGGTGTGAATGAATGtgataggtatttaaattcaaatgacaCAAATTTTGCGTCTCCACCTGTTACTGCATCGTCTCTTACTGCGACTGCAGGAGAATTTATTCCTAGGCATGCTCCAATGCAGTCGTCCTTTTCAAATAACGGAGGTGGTGATCGTAGATTCCAAACCGGTTACATGAACGTTTCTTCTGCAGCTACAAGTGATCAAAATCATACTGTTAAAAGGAACgggaaaaatgaaagtaaatatttttatacaaatcgTAACCAGTCGTCTGGACCGAAACCAGAAATGCCCTTCAATAAGCGCAAGAGTAATAGCCGTGGCAATGCAGATGCTATGTCCAATATGGAAAAAATGAAGAATGACGATAGGCAGCGGTTGTTGCTGGAAGCTGCTGCGTTCTTGACTCCGACTCCAACATTGAATAACACGGAATCAAAAGTTCCTTCAGCCCCAGAAAGTAGTTCAAAGCCGGAGAAGAAAAGACCAGAATCGCACGGAAATAGAGTAATTACAAATTCGTATAAATGGAATGAAAATGCACCTGGAAATTACAGGACCCAAGCAAATCAACAGAAGAAAAGGGGGGGTAGCTCCTACCAGTCGAGTGGGTTTCAGCATCAGAGAAATCCCCCAGAATACACAGCGGACGGGAACTCTAATGGAAGAAAGACACATTACCAAAACAGATTCAACAATTTTCATAACAGTGGGAGTTCATATCACAGGCCGGCTGCGATACAACAGTCTTCTCCGAAGAAGAACTCGTATGGAGATCAACATACAAGAGTATCAGCTGATGATGATTCCAGCCAGAGGGAACGCCTAGCAGACCAGTTGGAACGTGGAACACTGGAGTGTTTGGTTTGTTGCGAGAGAGTCCGTCAGCATGATCCCGTTTGGAACTGTTCAAACTGTTATCATGTGCTTCACTTGAAGTGCATTAAGAAATGGGCCAAGTCTTCAAGGGGAGAGACAGGATGGCGCTGCCCTGCATGTCAGAATGTGACGGCTCAAGTTCCGCACGATTATTACTGTTTTTGTGGGAAAGCGAGAGATCCAGAATGGAATCGCATGGACGCGGCACATTCGTGCGGACAGATGTGTGGACGGACTCGCTCCGACAAACATCCAGAATGTACTCATCGCTGTACTCTGCTCTGTCATCCAGGACCATGCCCCACATGCGTTGCCCAAGTCAACAGGAGCTGTGGATGTGGCAAGAAATCACAAGCCGTGAAGTGCGGATCTGATCAACCTCTCCTCTGCGGAGCCGAGTGCGGCAAGCAACTGAACTGCACTCTTCATTATTGCAAGGAAATGTGTCATGTTGGACGCTGCACTGAATGCCAGGAGAAAATAACACAAGTTTGCTATTGTGAAAAGACAACAAAAGAAGTTGCATGCACTGCAGAGTCGTTGAACCAGAAGAACTTTTCATGCGAGGGCACATGCGACAAAATGCTGTCTTGTGGCAACCATAAATGTGCCCTCAAGTGCCACTTGGGTCCCTGCCCCGCCTGTGAACTCACCCCGGATAAAGTAACTCACTGTCCTTGTGGACAAACCCCTTTGGCCGAGCAACGGAGCAGCTGCTTGGATCCTGTTTCTACATGTGGCCTACAGTGCAACAAGAAATTGCCGTGCGGACCCAGTAATGATCCGCATACGTGTCAGCTTCTGTGTCATATTGGGCCCTGTCCAGTGTGTCCGCTGTCCACAAACGTGAAGTGCAGGTGTGGCAACATGTATCGAGAGATACTTTGTCAAGACCTCCCTACAAAGGGGAGCGACGCTCGATGCGAGAAAAAGTGCACCAAGaAACGTTCATGTGGGAAGCATAAATGCAACCAGTTCTGTTGCATTGACCAAGACCATATATGTCCTTTGCCATGCAATCATCAGTTATCTTGCGGACAGCATCGATGCGAAGACACCTGTCATCGTGGAAGATGTCCGCCCTGTTGGAGAATGAGCTTTGAAGAGCTGTTTTGCGAATGTGGATCCAGTGTTTCTTACCCACCAATTCCGTGTGGTACAAGACGTCCAGAATGTTCAAAGCCTTGTTCAAGACCTCACCCGTGTGAACATCCTGCTTTACACAATTGCCATAGTCAGCCAAATTGTCCACCATGCACTGTGCTCACCCAGAAATACTGCTACGGCAAACACGAGTTGCGAAAGAGTATTCCTTGTCACCAGAACGAGTTTTCCTGTGGACTTCCATGCAACGTCGCATTGCCTTGTGGGCGCCACCACTGCATCCTGCCTTGCCACAAAGGTCCTTGTCTCAAAGAAGGACAGTCCTGCTCTCAGCCATGCACTACGCCTCGGAATCTCTGCGGCCACAACTGTGCCGCTCCGTGTCATGATGGTCCATGCCCAGATACGCCTTGCAAGGAAACGGTGAAAGTGACTTGTGAATGTGGACACCGCTCCATGAGTCGTGCCTGTCATGACAACGCTAAGGAGTATCAGCGCATTGCAACTTCGCTCCTCGCTTCCAAGATGGCAGACATGCAACTTGGTCATTCCGTAGATATAGGAGATATTCTGAGTAACCCTTCAACTCGCAAAGTGAGCTTAAAAACCTTGGAATGCAACGATGAGTGCAAAGTGATAGAACGGAATCGCAGGCTGGCCATCGGTCTCCAAATCCGTAATCCAGATTTAAGTGCCAAACTGACACCTCGTTATTCAGAGTTCATGCGACAGTGGGCTAAGAAGGACCCTCATTTCTGTAACATGGTTCATGAGAAACTGACGGAATTGGTGCAGTTAGCAAAGCAGTCGAAGCAGAAGAGCCGCAGTTACTCGTTTGATTCTATGAACAGAGATAAAAGACATTTTGTGCATGAGTACTGCGAACATTTTGGTTGTGAGTCCGTTGCTTACGATCAGGAACCAAAGCGAAATGTAGTGGCTACAGCTGCCAGAGACAAGGCCTGGTTGCCGAGTATGAGTCTCTTGGAAGTGATCCAGAGAGAAAGCGGCCAGAGGAAAATTCCAAAGCCTGTTATAACTTCAAGTCGAGCACCTTCACAGAGAACAATGGACGTGTTGCCGGTGAAGTGTTCGCCAATCCAGTCAACGCCGGTTACGGAGAAGTCAGCTGGTTCTGTTACTTCTGCTAAACCCTGTCCTGAGGAAGACGAAAttgattattttgattttacGTGA
Protein Sequence: MASWNGSFPEDENIHNYNYVTPAYADNNVQSYPANWAYYPVSTVPDHQSTVDGLQQLHTPTFTNQPVQTNFNIAAPPQFVNLSQRLQGVNECDRYLNSNDTNFASPPVTASSLTATAGEFIPRHAPMQSSFSNNGGGDRRFQTGYMNVSSAATSDQNHTVKRNGKNESKYFYTNRNQSSGPKPEMPFNKRKSNSRGNADAMSNMEKMKNDDRQRLLLEAAAFLTPTPTLNNTESKVPSAPESSSKPEKKRPESHGNRVITNSYKWNENAPGNYRTQANQQKKRGGSSYQSSGFQHQRNPPEYTADGNSNGRKTHYQNRFNNFHNSGSSYHRPAAIQQSSPKKNSYGDQHTRVSADDDSSQRERLADQLERGTLECLVCCERVRQHDPVWNCSNCYHVLHLKCIKKWAKSSRGETGWRCPACQNVTAQVPHDYYCFCGKARDPEWNRMDAAHSCGQMCGRTRSDKHPECTHRCTLLCHPGPCPTCVAQVNRSCGCGKKSQAVKCGSDQPLLCGAECGKQLNCTLHYCKEMCHVGRCTECQEKITQVCYCEKTTKEVACTAESLNQKNFSCEGTCDKMLSCGNHKCALKCHLGPCPACELTPDKVTHCPCGQTPLAEQRSSCLDPVSTCGLQCNKKLPCGPSNDPHTCQLLCHIGPCPVCPLSTNVKCRCGNMYREILCQDLPTKGSDARCEKKCTKKRSCGKHKCNQFCCIDQDHICPLPCNHQLSCGQHRCEDTCHRGRCPPCWRMSFEELFCECGSSVSYPPIPCGTRRPECSKPCSRPHPCEHPALHNCHSQPNCPPCTVLTQKYCYGKHELRKSIPCHQNEFSCGLPCNVALPCGRHHCILPCHKGPCLKEGQSCSQPCTTPRNLCGHNCAAPCHDGPCPDTPCKETVKVTCECGHRSMSRACHDNAKEYQRIATSLLASKMADMQLGHSVDIGDILSNPSTRKVSLKTLECNDECKVIERNRRLAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPHFCNMVHEKLTELVQLAKQSKQKSRSYSFDSMNRDKRHFVHEYCEHFGCESVAYDQEPKRNVVATAARDKAWLPSMSLLEVIQRESGQRKIPKPVITSSRAPSQRTMDVLPVKCSPIQSTPVTEKSAGSVTSAKPCPEEDEIDYFDFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -