Bger008847.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blattella germanica
Gene Symbol
nfxl1
Assembly
GCA_003018175.1
Location
PYGN01000012.1:980442-1006922[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.1 1.6e+04 -3.3 1.1 15 19 169 173 168 173 0.81
2 16 0.15 2.1e+03 -0.5 0.8 4 10 204 210 203 210 0.95
3 16 4.8e-08 0.00067 20.2 16.4 1 19 218 235 218 235 0.99
4 16 1.1e-07 0.0015 19.1 12.8 1 19 271 289 271 289 0.99
5 16 2.8e-08 0.00039 21.0 16.8 1 19 324 342 324 342 0.98
6 16 0.00016 2.3 9.0 8.8 1 18 377 394 377 395 0.96
7 16 0.68 9.5e+03 -2.6 0.4 1 5 404 408 404 413 0.75
8 16 3.5e-05 0.49 11.1 15.6 3 18 431 446 429 447 0.92
9 16 7.7e-11 1.1e-06 29.2 14.2 1 19 456 474 456 474 0.99
10 16 0.74 1e+04 -2.7 1.0 5 10 502 507 502 507 0.89
11 16 0.009 1.3e+02 3.4 8.7 10 19 523 532 520 532 0.92
12 16 0.038 5.3e+02 1.4 5.4 3 12 543 552 542 552 0.90
13 16 0.65 9.2e+03 -2.6 5.8 14 19 581 586 581 586 0.90
14 16 2.3e-06 0.032 14.9 5.5 1 12 622 633 622 636 0.95
15 16 6.4e-07 0.009 16.6 16.1 3 19 663 679 662 679 0.91
16 16 1.8e-05 0.25 12.0 12.6 1 16 724 738 724 744 0.92

Sequence Information

Coding Sequence
ATGGAAGATTCAAGAGGTAGGGGTCGAGGTAATCCCTGGAATAGAGGAAGAGGTAGAGGCCAAAACCAAAATTATTCAGGCAGAAAGAAACCTGGACCAGATAAATCTTCTGAGACAAAGTTCCAGGAAGCCCATGCTAGACATCAGGCTTCTCTTCAGAAACACATAAAACAAGACTATGAATCCTCTTCAGAAGAAGAGGAATTAGAAAGTGACAACATTTTGTTTTCCGTTTTAAGAGGATACTCACAGGTTGGAGGAAAAAGCGATGATCTTGGACGTACGCAGCGCTTCCTTGAGGATGCATTTCAGTCTGGTGCTGCATCTTGTCTCATTTGCATTGCTTCTGTGAAAAGAAATGATGCTATCTGGAACTGTGTAGAATGTTTCTGCTTTTTTCATTTGACTTGTATCCAGCGTTGGGCAAAAGACAGTATAGCACAACAAAAACAAGCCCTTGAAGATCAGCCAAGAGAAAATGCTGTATTTACTTTCAAGTGGGCATGTCCGAAGTGTCGCCATGATTATGAGCAGGCAGATACACCACAAAGATACCACTGTTTCTGTGGGAGGATGGAAGACCCACCATTCCATCCTTGGCTGGTGCCTCATTCTTGTGGAGAAACATGCGGAAAAGCTCTACAGCCATTATGTGGACATAACTGTCTTCTGCTGTGTCATCCAGGACCATGTCCACCGTGTCCTAAGATGATAAAAACTAAATGCTTTTGTGAGAACCAGCCTCCAAAACTCCAGCGCTGTAGCAACAAAGATTGGTCATGTGGATCGAAATGTGATCGCACATTAGGATGTGGGCGACATGCATGTGTCGAAGTTTGTCATCCTGACGCCTGCCCACCTTGCCCTAAAACAAGTGTTCAGAACTGTGACTGTGGTCAGAAGAAGACAATGCGCCCATGTGCCTCCCCAAATTGGCAGTGTGACAAaAAATGTGGCAACCCTCTGAGTTGTGGACATCACAAGTGTGAGAAAGTGTGTCACTCTGGTTCTTGTGGTTTGTGTCCGTTGACAGCGGCCAGGACTTGTCCATGCGGGAAAGCAACTTACAAGCTCCCATGCACACAAGAGACACCTACTTGTGGAGATACTTGTGACCGCACTTTAGAGTGTGGAGCTCATGTCTGCTCAAGAAGCTGTCACAGAGATAAATGTGGTTTGTGTTTGGAAACAGTGACGAAAAAATGTCGCTGTGGACTTCATAGCAAAGAATTGTTGTGTCAGAAAGAATTTCTTTGTGAAACTAAATGTAAACGTACCAAAGACTGTTTGCGACATCCATGTAATCGCAAgTGCTGTGATGGAAACTGTCCTCCTTGTGAAAAGCCGTGTGGCAGAACTCTGCGTTGTGGCAATCACAAATGTTCATCTGTTTGCCACCGTGGTCCTTGCTACCCGTGTCCTCTGACCGCAGAAGTCAAATGCTATTGTGGCTCCACAGTTCTTACAGTTCCATGTGGTAGCAAGAAGAAGACTCGACCTCCTAGATGCAGCAAACCCTGCAGGATAAAGCCAGACTGTCACCACTCCAGTAGAGAAAGTCATCATTGCCACTTTGGAACCTGCCCTCCGTGCAAACAGGTTTGCCGTAAGATTTTGGAGCCTTGCCAGCATCTATGTCCTGCTCCTTGTCATTCGGCTGAGTGGGTCAAAGTGCAACAAACGCTCAAACCAGTAGGGCCTTGGGAAATGACGCAACCTACAATGGAATTACGAGAATTGCCTTGCCCTCCTTGCAAGGTACAAATACCAATCACTTGTCTTGGAGGTCATGAGACATGTAATTGGTCGTGTTATGTAGCAAGTCCAACTTCGTGTCAACGAGAGTGTGGAAGAGTGCTGGCGTGTGGGAATCATACGTGTAAGCTACCTTGTCACACTGTGGAAGGAGCACCTAATGATGTTGCTGCTGGTAAAAACTGTGAAGAATGCGAGTCAGGTTGCTCAAAGCCTCGTCCAGAAGGTTGCACCCATACCTGCTTGAAGCCTTGTCACCCAGGTGCCTGCCCACCTTGTACTCAGATGCTACGAGTTCAGTGCCACTGCAATCTCAACCAGCTGTATGTGCGTTGCAGCGAGTGGACGCTTCCAGACGAAGACAAGAAAAAGGCTCTTCGGAGCTGTGGCAACCAGTGTCCtaaaaatTATGAATGTGGCCATCGATGTCGCATTCCATGCCATCCCGGAGAGTGTCCTGATCCCGAGTTATGTCGCAAGAAAGTGAAGCTCACGTGTCCCTGCAAGCGTGTGAAGAAAGACTTCCCATGTGATGTTGTTAGATCTGGTGAAGCCAAAGTAGAATGTGATGATGCATGCAAGAAGAAAAAGGAAGAGGAGAGAAAGataaaagaggaagaagaaatgaAAAAGCAGCAAGAAATAGAAAGGAAGAACCAGGAGGAATTAGAAAAGTTTCAGAAAAAGTTTCAGGGACGGAAGAAACACCGTGAACGCCGTCAACCTGAAATAAAAGAAACTGGATCAATTCTTACTCGTTATTGGCTCTATATGGTTGGGATTTCTGGTGTACTTTTGGCAGTTTATTTTGTTGTTACGTCATAA
Protein Sequence
MEDSRGRGRGNPWNRGRGRGQNQNYSGRKKPGPDKSSETKFQEAHARHQASLQKHIKQDYESSSEEEELESDNILFSVLRGYSQVGGKSDDLGRTQRFLEDAFQSGAASCLICIASVKRNDAIWNCVECFCFFHLTCIQRWAKDSIAQQKQALEDQPRENAVFTFKWACPKCRHDYEQADTPQRYHCFCGRMEDPPFHPWLVPHSCGETCGKALQPLCGHNCLLLCHPGPCPPCPKMIKTKCFCENQPPKLQRCSNKDWSCGSKCDRTLGCGRHACVEVCHPDACPPCPKTSVQNCDCGQKKTMRPCASPNWQCDKKCGNPLSCGHHKCEKVCHSGSCGLCPLTAARTCPCGKATYKLPCTQETPTCGDTCDRTLECGAHVCSRSCHRDKCGLCLETVTKKCRCGLHSKELLCQKEFLCETKCKRTKDCLRHPCNRKCCDGNCPPCEKPCGRTLRCGNHKCSSVCHRGPCYPCPLTAEVKCYCGSTVLTVPCGSKKKTRPPRCSKPCRIKPDCHHSSRESHHCHFGTCPPCKQVCRKILEPCQHLCPAPCHSAEWVKVQQTLKPVGPWEMTQPTMELRELPCPPCKVQIPITCLGGHETCNWSCYVASPTSCQRECGRVLACGNHTCKLPCHTVEGAPNDVAAGKNCEECESGCSKPRPEGCTHTCLKPCHPGACPPCTQMLRVQCHCNLNQLYVRCSEWTLPDEDKKKALRSCGNQCPKNYECGHRCRIPCHPGECPDPELCRKKVKLTCPCKRVKKDFPCDVVRSGEAKVECDDACKKKKEEERKIKEEEEMKKQQEIERKNQEELEKFQKKFQGRKKHRERRQPEIKETGSILTRYWLYMVGISGVLLAVYFVVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
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80% Identity
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