Bger002698.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- pnr
- Assembly
- GCA_003018175.1
- Location
- PYGN01000026.1:1395409-1410521[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 2.8e+04 -5.8 3.4 20 26 12 18 10 18 0.78 2 2 1.4e-18 6.8e-15 55.0 3.7 1 35 395 428 395 429 0.98
Sequence Information
- Coding Sequence
- ATGTGTAATATACCGCCGAAATTTTATGAACTTTGTCGTCTTTGTTTATCGTGTGATGGTGTGAAATCGTCTATTTTCGATGACGAAGGAACCCAACATAACTATCCACTTAAAATTATGACGTGTCTGTCTATATTgGTCTCTGACAGAGATCTTCTGCCTCCGTCAATATGTCACCGCTGTGTTTATAAGTTGGACGTTTTATATGACTTCAGAGAAGTCTCCAGAAAGTCAGATGTCATCTTGAAGCAATATTTAAGCTACACAGAACATTTGACTAAAGCAACACAAgCTACAGTGAAGCGAGAAGGTAGTGACTTGGTGGAGTGCAGTAGTAGACAGAATGGAGTTCAGGACGACAGAGAATCATCATCACCCTGCAGCGAGCGTAGCCTCGATCGAGAGGCACGAGAAATGGTGGCAGCTCTTGAAATGCGAATCAAAGATGAACCTcgtgaagaggaagaagaagatgatgaaatcGAGGAAGTGGACGAAGAGGAAACATCAGAAATGTCGCAACACATTAATGGCAGCATACATCCAGATGTAGCGGATGAGAGGACGGAGTCAGGCAACGAATCAGAGCATGAACAGGGGTTAGACATGTCAATGGACCGGAAACCGAAAATGGAGGAGATAGAAGAAGAACACAATGGGAAGAACCATGGAAGCCCTCATGAATCAGACCATGAGGAAGAGGCAGTGATGCCACGATCAGAAGTACAGTCAAACTCAATGGAGAGTCATGAGATCGGAAGCGGTCGAGGGGGAGAAGCCAGTAATCTCCTCCGAACTCTGATCTCTTGTCGGAAACTAGGAATAACTCCGTCTGATAACCGCGTAACTTCCATTGGTACTTCGTTACAGCATTCGCTGAAATCTCGTAGCAAACTGTATTCTGCCATTCAAGGTTCTTCTCTTGCTCCTGAAATTCCCTCTGCCGCGGTTCTTGGGAATCGAACAAATCTTCCAGCATCAGAAGAAGAAGTTCCACCTGCATTTGCATTATCCCTCGCTGCAAAGCAGGATGTCAACCGCAGGAAACAAAGTTGCCCCGCTAAGGCAGATGCATTTGTGCGAGGAGAAGGCTACCTTCCTGACTTTACAGGAAACAACCCCTGGTGTAATATTTCGGCAGTCAAAACTGGCAGGCTTGCAGCCCGGCGAATGGACCTGGCTTGCAGTAACTGCGGTACTATGACTACCACAATCTGGCGGCGAAATCCAGAAGGCGAGATGGTATGCAATGCTTGCGGTCTGTACTACAAATTACATGGTGTAAACCGGCCAGTGACGATGAGGCGTGATACCATCCACACGAGGCGTCGGCGGCCTAAAGGGGAAAAAGGAAGTGGACGACACAGAAACAAATCAGGTAATAGTGGCAGCAGTAATGAAGACCCGGTAGATATGTTAGCAGCCCTTCGAAGACAGATCCAGCCACACCTAATGTTGGCCCTCCAAGCAGCGCCTGAGAGCCGAACCTCATTGCCTAGCAACCACAATGCCGCTTCTACTTACGCCATGGTCCAAGTGAAGACTGAGCCCATGGAATCTGCaggggaagaagaagacgaagacgaGAACGTGGCCGACCTCCCTCTAAATCTGGTGTCTACAACACTCTCGGAACCCCCGTCCCAGTGA
- Protein Sequence
- MCNIPPKFYELCRLCLSCDGVKSSIFDDEGTQHNYPLKIMTCLSILVSDRDLLPPSICHRCVYKLDVLYDFREVSRKSDVILKQYLSYTEHLTKATQATVKREGSDLVECSSRQNGVQDDRESSSPCSERSLDREAREMVAALEMRIKDEPREEEEEDDEIEEVDEEETSEMSQHINGSIHPDVADERTESGNESEHEQGLDMSMDRKPKMEEIEEEHNGKNHGSPHESDHEEEAVMPRSEVQSNSMESHEIGSGRGGEASNLLRTLISCRKLGITPSDNRVTSIGTSLQHSLKSRSKLYSAIQGSSLAPEIPSAAVLGNRTNLPASEEEVPPAFALSLAAKQDVNRRKQSCPAKADAFVRGEGYLPDFTGNNPWCNISAVKTGRLAARRMDLACSNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKGSGRHRNKSGNSGSSNEDPVDMLAALRRQIQPHLMLALQAAPESRTSLPSNHNAASTYAMVQVKTEPMESAGEEEDEDENVADLPLNLVSTTLSEPPSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -