Bger005826.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- pnr
- Assembly
- GCA_003018175.1
- Location
- PYGN01001133.1:496899-625941[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 1.6e+04 -3.8 0.1 11 19 87 95 84 96 0.81 2 3 3.4e-18 1.6e-14 53.8 3.2 1 34 164 196 164 198 0.97 3 3 5.2e-19 2.4e-15 56.4 6.2 1 35 218 251 218 252 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAGTCGAATGGGGCTCCGGGCGGTGGCAGTTACTCCGACACGACCACACCCAACGGTGGTAACAACGGCGGAGGCTTCCTTGGTGTCACTGGCACTTCGCATCACCAGCATCCCGTTTATGTTCCTTCTAACAGAGCCGTAATGGGGGGATTACCTCagcatcatcaccaccatcaccctCAATACAGTCCCTCAAGCGGACCCGCTACCAACACCCACCATTTCGTAGGAGGATCTACACCTAGCCCTAGTTCCTGGCACCACCAACCTGGTGGACCCGAGAGTTACGTCACAGCCACCcctcatcatcatcaccatcatcacctcGGAACAGGAGCTCATCATCAGACACCGCTCTCAAATCCTTTCTACGCTCAGAATGCTATGATGATGTCATCTTGGAGAGCTTATGATAGCACCGGTTTTCAGAGGACTTCGCCTTATGATGGTGCTATGGAATTCCAATTCGGAGAAGGTCGCGAATGTGTCAACTGTGGCGCCATCTCGACGCCTCTATGGCGCCGGGACGGGACTGGACACTACCTTTGTAATGCCTGCGGACTGTACCATAAGATGAACGGCATGAATCGACCCCTTATAAAACCTTCTAAGAGGCTGACTGCTACAAGACGGCTAGGCCTTTGTTGCACCAATTGCGGTACACGTACCACGACTCTATGGCGTCGCAACAATGAAGGTGAGCCAGTATGCAATGCTTGTGGCCTATACTTCAAGCTTCACGGCGTGAACCGTCCGCTTGCCATGAGAAAAGATGGGATTCAAACACGAAAACGCAAACCCAAGAAACAGCAAACCGTGGGCAGTGGGGACAAGTCGCAAGAGGACTCTCCGACATCCGAAACCAAGTCCAGCTCGGGACCGCCGCAACCAAGTGAAAACATTGCCCTAGGTGCAACCAGCAGTGGCAACCACCACCATTCGAAATCTTCGCTTGTCGACCCACGTCCCTACTTAGGTCACACATCACTGCTGGCTACAACATCGCTATCAGGATCCATCAAAACAGAACCCTCAGATCTTCAACTTTCTTCGGCTAATAAAACAGGTTCGGGCACAACGTCGACAATACTTTCATCGCACACTCCTACTTCGTCTACGACATCGacgggaggaggaggaggagtatACTCGAGTTTTTCAACTCCGAATCACCACCATCAATTGAACAATCACCAAATTTTTGGTTTCCCGCCACCCCCTCCACCTGTAGCATCAGCTACTGCGGGGGACGTCGGTAGTTACGTCATGGGGCATCATCCAGcacatcatcatcaccatcatcaccatatGACTGCGACCAAACTAATGGCAACGACATAG
- Protein Sequence
- MFQSNGAPGGGSYSDTTTPNGGNNGGGFLGVTGTSHHQHPVYVPSNRAVMGGLPQHHHHHHPQYSPSSGPATNTHHFVGGSTPSPSSWHHQPGGPESYVTATPHHHHHHHLGTGAHHQTPLSNPFYAQNAMMMSSWRAYDSTGFQRTSPYDGAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQQTVGSGDKSQEDSPTSETKSSSGPPQPSENIALGATSSGNHHHSKSSLVDPRPYLGHTSLLATTSLSGSIKTEPSDLQLSSANKTGSGTTSTILSSHTPTSSTTSTGGGGGVYSSFSTPNHHHQLNNHQIFGFPPPPPPVASATAGDVGSYVMGHHPAHHHHHHHHMTATKLMATT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -