Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01000201.1:283567-321170[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.9 2.8e+02 2.9 0.1 1 23 240 263 240 263 0.80

2 16 1.1 61 5.0 2.1 3 23 268 289 266 289 0.95

3 16 0.15 8.7 7.6 0.0 2 23 293 315 292 315 0.94

4 16 6.8 3.9e+02 2.4 0.2 3 23 320 341 319 341 0.91

5 16 0.27 16 6.9 1.5 3 23 506 527 505 527 0.92

6 16 0.99 57 5.1 0.0 8 23 541 557 540 557 0.92

7 16 0.0099 0.57 11.4 0.2 1 23 982 1007 982 1007 0.93

8 16 3.4 1.9e+02 3.4 1.8 1 23 1022 1045 1022 1045 0.90

9 16 0.42 24 6.3 1.0 1 14 1143 1156 1143 1157 0.91

10 16 0.0036 0.21 12.8 1.9 1 23 1186 1209 1186 1209 0.97

11 16 0.0037 0.21 12.7 0.7 1 23 1215 1237 1215 1237 0.96

12 16 0.12 7.1 7.9 2.8 2 23 1244 1262 1243 1262 0.92

13 16 0.00021 0.012 16.6 0.4 3 23 1270 1290 1268 1290 0.94

14 16 0.00054 0.031 15.3 0.2 3 23 1298 1319 1297 1319 0.95

15 16 2e-06 0.00012 23.0 0.2 1 23 1325 1347 1325 1347 0.99

16 16 0.0047 0.27 12.4 0.6 2 23 1354 1376 1353 1376 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.9	2.8e+02	2.9	0.1	1	23	240	263	240	263	0.80
2	16	1.1	61	5.0	2.1	3	23	268	289	266	289	0.95
3	16	0.15	8.7	7.6	0.0	2	23	293	315	292	315	0.94
4	16	6.8	3.9e+02	2.4	0.2	3	23	320	341	319	341	0.91
5	16	0.27	16	6.9	1.5	3	23	506	527	505	527	0.92
6	16	0.99	57	5.1	0.0	8	23	541	557	540	557	0.92
7	16	0.0099	0.57	11.4	0.2	1	23	982	1007	982	1007	0.93
8	16	3.4	1.9e+02	3.4	1.8	1	23	1022	1045	1022	1045	0.90
9	16	0.42	24	6.3	1.0	1	14	1143	1156	1143	1157	0.91
10	16	0.0036	0.21	12.8	1.9	1	23	1186	1209	1186	1209	0.97
11	16	0.0037	0.21	12.7	0.7	1	23	1215	1237	1215	1237	0.96
12	16	0.12	7.1	7.9	2.8	2	23	1244	1262	1243	1262	0.92
13	16	0.00021	0.012	16.6	0.4	3	23	1270	1290	1268	1290	0.94
14	16	0.00054	0.031	15.3	0.2	3	23	1298	1319	1297	1319	0.95
15	16	2e-06	0.00012	23.0	0.2	1	23	1325	1347	1325	1347	0.99
16	16	0.0047	0.27	12.4	0.6	2	23	1354	1376	1353	1376	0.93

Sequence Information

Coding Sequence: ATGAGTCAAAATGAGGAGGGGGGCGATGGAACAAATTTGGAACGTACAAGCTTTCCATTGTTTCGTCCAAAGAAGGGCAAAATGTCATCAAAAACCACAAGGGACATTGGTAGTCTGTCTGGATGGGGAAAATCAATGGAGGAAGGTGGAACGGGTCCATTGGAGCAGTTGGTGGATTACGCAGAAGACAGCATTCAGGAGGAGTTGACTCTGAGAGGAATGCGGAGGTCGAGCAGCGGGAGCGAGGACGGGGACAAAGACTCTCCTCCGGGGGCAGAAATGGCAGGAGGCCTGAATCCATACCTCATGAATCCACTTCTCATGGGTCTCCAGTTGCCTCAGTTGGCAATGCTGATGCAGCAACAACAGCCGccacaacagcagcagcagccaTCGCAGCAGATGCAGAACCCCTCCTCAAACTTGAATCTTCCATCCTCTTCATCTCTGTTGAATCCACTGATGATCCCTCACCTTTTGCCATCAAATCAGACTCCTGGTGTCATGTTGCCTTTGGAACAGCAGCAAAAGTCGTGGATGTATGGGGCCTCCGCTTCAGAGATGGAGAGGCCGTTGCTTTTAGACGAGTCGCAGAAGGGAACGATCATGGGCAGCACCACGAACATGCGGACCATGCCACGGGTAATGAAAGGGACTAAAGAAGCTTTTACTTCGCATAAAGAAGACTCCGTTTCTACGACGTCGGGCAAGCAACCTTTCGTTTGTGAAATATGCAATGACTGGTTTTTTTCTCGTGAAAAACTAGTCATTCATTTGGTGATGAACCATTCGATGCAACATTGCCACTTCTGTTCTCAGCTTTTTGAAACGGAGGACGCGCTGGCCGAACATGAACGACAGTCGCACCTCCCTTTGGAATGCGACACTTGCAAATTGTCTGTGCCAACTTCTGAAGAGTTGGCAGAACATTACGAAAGCGAGCACGACGTACGAACGTGTATATATTGCGGTGTCCTTGTAAAACCTAAATCATATTACGAGGTTCATGTGCGTCGGAAGCATTTCGTCTGTTGTTCGGAGGCTTTGCAGCAAGATGTTGGAGAAAGAGTTCGCATAGTAGATAGGTGGGACGGACAGGAAGGGAACTCGATTTGGACTTTCGTCTGTAGACTTTGTGGAAAAGAAAGGAAGAGGTTGGAAACTTTTGGGCATTTCTTTTCCTATCATCGTCTGTCATTATCCTGTCTCATCCAGCTTCTAGAATCAGAAGGCATCGTTTTCTCGGTTCAGGGAACTCCTGCGCCGGGATCTTCAAACGTACAAAACTCGAGCCAGCAGCGATCGTCGGAGTCTGCCGTCGTCGATGCTTCCAATGTAGATGCCTCTCAAACCTCAGGGATCGGCGAAGAATCGCAGCAACATCATCATCGCCGCAATACGAGCTCACCTTCACTAACCCCAAGTCGTTGCACCGTGTGTACAAATCCATACTCTGTCCAAGTGCCAAAGCTCGCTCACGATCTCTTCTGTCGCCGTAGCACCACTCTGGCCCTTTGCAAGTTCTGCGACCGGACATTCAATAGCAAAACGTCGCGAGACTCTCACGTTGCAAAGGAGCACGTAATACTTCCGTGTCTCGTCACAGAATGTTTGACCGATATCGTGTTCACTCAGGAATCTCAACTCTCTGCTCATTATTCGACGGATCATTGCGTGCGCGTGTGTAGTTATTGCAAATCGCTCGTTTCGACGCGCGATGGGAAATATTTGGCGCATCTAAAGCACGAACATGCATGCTCCAATGCGGGACGCGCCATACGTAGTGTGGATGCCAATCTCTCGGGGTCTGATCTTTACCATATTCAGACTTACGACACTTCTGTTTCAGTCATCTGTTCTCTGTGTGATGCAGATATTACCTCTCTGATGAAAGACGTCATCTCCTTCTTTAGGCATCTTCAGCTTCATAAAGTTACCCTACGCTTAGCCCTTACCCTGTTAGAAATACACCCCTCCTGTGAAAATGTGGACGTAGAAAAGCTGAATAAGAACAGCACCTTACTAGAAACACAAGAACAAAATGCAACAGAccaagaaaacaacaaaaacataaCATGGGGTGCCATTCCATCCGAGTCGGAAGAATTGACGGATAATTCCAAAAGCAGTAGATTAGAAACGAGAAGCAAATCAAAGCTTGGTCAAAAGTCAAATTctacaaaagaaagaaaagatgCCGGAGGAGATGGGAGAAAGAAAGGAGACTCATCAGAGAGttcaaaaacaaaaaatggcAATCCAGGTGGAGAGAGCAGTGGCGGAGATGGCAAAAAGAGTCATGGAGATGGTACGGATGATGCTCCTTTTGATTCTTCCAGTGAAATTAGTTCAGAGGATGAAGATTTGGGATCAGACGCAGACGTTGGGGAAAATGAAGACCTGACAGAAGATGATGACGAGGAATATACAGTTAAAGAAACCAAAATAGAAGAGAAGGTAAAGAAGAACATACCACTTCCATTATCAGAGATGGGGGAGGCTGATATTGATCCAACAGAAGTGGAATGCATCCTCACAGACTCCAGCGACGACGATGGTGATTGTGACTCCTTTGACGATGACAATCTTGTTGGTTTAGAAGCAGACAGTGACGAACCAAGTGCTATATTTTCATCcatgaaagtgaaagaagaatcTTCAGGCAAAACAGACAAAACAGGCACTGGACTTCTTGAAAATGTAGATTTGTTGGAGCGAACTATGCAAGAATTGTTTCAAGATGAAAATTTGCAAGACGTGGCTTTGGCTGGGAACAAAAGCGATCAACAAGTGAAGATTGAACAAGCAAAAGCAAAGAGGAAAGGAATAGTATGTGAAATTTGTAGAGGAAAATTTTCGACAAAAGAGGGTCCTAGACAGCTGTTGGATCATTTAAATAGTCTCCACGGTTATACGATAGCTCCATACTGTACGCCAAAAGAGTTTGTCTGCACTGTAAGAGGCTGCAGGGAAGTATTCAGCACGCAAGGTTCGTTGAGTTACCATTTAAGCGAGGTCCATCAGCAAGAACAAAAAATCATAGATGCTGAATCTTTCAAAATCTTTCAATGTCCATACTGTGCCCTCCATTCGACATCTAAATTGGCCATGCGCCAGCATGTGTTCAACTTTCACAGAGAAAATTACGTTTGCGACAACCCTTTGGAAGATTTGGCGCACAGGTGTCGACATTGTTCGGGACTTTTCTGGCGTACAGAAGATCGCGATGATCACCAGGTTGAAGCACACAAAGACAAGATGGACACCTTCTTCAAATGCTACGTCTGTAGTCATCTTTATTCCAGCAAGAATGTCCACTCGGAATCACGGCGTAGGGATTGCAGCCTTTGTGGGAAAGTTTTGTGGAGCAAAAGGGCACATGCAATTCATTATCGCATGAAGCACAGTGCAGCGTCAAAAGTTGGCTTTCGTTGTCGCATTTGCCAGAAGAGGTTTGATTCCAAAGATGAAAGCCTTTGTGGGAAAGTTTTGTGGAGCAAAAGGGCACATGCAATTCATTATCGCATGAAGCACAGTGCAGCGTCAAAAGTTGGCTTTCGTTGTCGCATTTGCCAGAAGAGGTTTGATTCCAAAGATGAAAGAAAATTACATTACCAAGTTGATCACGAAGGGGAGAGTCCCTACCACTGTGCGGAATGCGGGAAAGGATTTGCTTCAAAATCTGGAATGTATGGTCATCGTCAGCTTCACACGGGCTCAGGGGTATCCAAATGTCAGTATTGTGGAAAGGAATTTACGAAACTCAAATACCATATTCGGAAACATACGGGAGAAGGTCTCATCAACTGCGAGATATGTAGCAAGTCTTTCACCAACAGCTTTGCCCTGAAAGAACACCGTGTGATCCACAACCGTCAGACGCAGATCCTCTGTCAACAGTGTGGCAAAGGCTTCAATAGTGAGAAGTACCTGCAGCGACACGTTGCCATCGTCCACGAGCCCTCACACACGTTTACCTGCCCTTTATGTCCAAAGGCATTTTCACAGCAGGCACGCCTAAAGGCACACCTTATGACTCACACAGGCGTGAAACACATCAAGTGCCTTCTGTGTGAGAAGGCATACTCTGTACGCAAGTCTCTGCGGCGTCACCTCCTGGAGAAACACGAGATCTCTCCAGAACACCCACAGTACAAACACTGCTTTTATGCTATGTCTGCTGCAGAGGCTGGCTTACACATCCCTGAAGGTGTGCCCACCAATATTAGTGGAGAACCTACAGAAGATGATGATTCTACGAGCCAGTCATCacccaaagaagaagaagaggagaaaCCCCTGGCAAAAAAGTCACCTAAAAAGGGCACTCCTGGCCGTAAACCCTCAACTTCTGCAGCATTTGAGGATTACTCGAGCATTCCATCAGGCAAAAACGATGTTCAGAAAACAAAAGGAAAAAAATCTCCCACCACTAAAAAAGCTTGGTCTAAACAAACAGAGTCACAGTCCACTCCAGGAACGTCTGGCGAAGGTAGGCATCGAATCTTGAAGAAAAGCAGGCAAAAAACATCTCCACGGAAGGTAACGAAGAAAGGCGAAGTGGATGAGAGCGATCTCTTACCAGCTGGAAGCGATGAAGAGAATGAATCCCGAAGCAGTACCCCGGAAGTGAGGAGAAGAGGCAGGCCTCGAAAGAAGAGAGCGAACAGCAATGCGTCCGCAAGAGTTCAGCCACCAAAAACAAGAGGCTCCCCAATGAGGAAATTGCAACAACAGCAACAGTTAAATCAGGAATCAGAGCTGTTGCATCAGGAACAGGAGCAAGAATTTGAGATGGAAATTCCTGCTGCTGCTCCTCCTACTGCAACTAAAAGGTCCCCACCGCCAACCCCTAATCTTGGAACAACTCGGAAAAAGAGGAGAGTCGAAGCCATTGTTGAAACATTGCAAAAGTCAACGGGTTCACCTAGTGGCAGTAGTCctaaagaagatgatgatgatgaggaagatgaagaagaagatggtgAGGAATCAGAATCAGAACTTGCCGCTGGTGATGACCCTCGTATAGAGATCCCTGTCGTCGGCATTGGAGCCACCAACGATGATTATAATCAAAGCAGTGGTGCTAATGATGACCAAGTTGGCAGCAGCACAGATTTTGGAGGTGTCGTTGAGGATACTACAGAGGAAATgaatgaagatgattttgatttGCCTGTCAGGACAGAATTGGAAAGCTATGAAGACGACGGGAATTGCAGTGGGGGCGGTTTTGATGCAGTTCCGACGTTAGCAAGAATAACACCCCTCATAACTCGAAATAATCCCAAGAAAGGAATACATAGAACAGGAGATTCTGGAAAGAGGTACGTACAGAACTTGCAGGCACGAACTTCAAAGGATGGCGACGATGAGTACAGCTAG
Protein Sequence: MSQNEEGGDGTNLERTSFPLFRPKKGKMSSKTTRDIGSLSGWGKSMEEGGTGPLEQLVDYAEDSIQEELTLRGMRRSSSGSEDGDKDSPPGAEMAGGLNPYLMNPLLMGLQLPQLAMLMQQQQPPQQQQQPSQQMQNPSSNLNLPSSSSLLNPLMIPHLLPSNQTPGVMLPLEQQQKSWMYGASASEMERPLLLDESQKGTIMGSTTNMRTMPRVMKGTKEAFTSHKEDSVSTTSGKQPFVCEICNDWFFSREKLVIHLVMNHSMQHCHFCSQLFETEDALAEHERQSHLPLECDTCKLSVPTSEELAEHYESEHDVRTCIYCGVLVKPKSYYEVHVRRKHFVCCSEALQQDVGERVRIVDRWDGQEGNSIWTFVCRLCGKERKRLETFGHFFSYHRLSLSCLIQLLESEGIVFSVQGTPAPGSSNVQNSSQQRSSESAVVDASNVDASQTSGIGEESQQHHHRRNTSSPSLTPSRCTVCTNPYSVQVPKLAHDLFCRRSTTLALCKFCDRTFNSKTSRDSHVAKEHVILPCLVTECLTDIVFTQESQLSAHYSTDHCVRVCSYCKSLVSTRDGKYLAHLKHEHACSNAGRAIRSVDANLSGSDLYHIQTYDTSVSVICSLCDADITSLMKDVISFFRHLQLHKVTLRLALTLLEIHPSCENVDVEKLNKNSTLLETQEQNATDQENNKNITWGAIPSESEELTDNSKSSRLETRSKSKLGQKSNSTKERKDAGGDGRKKGDSSESSKTKNGNPGGESSGGDGKKSHGDGTDDAPFDSSSEISSEDEDLGSDADVGENEDLTEDDDEEYTVKETKIEEKVKKNIPLPLSEMGEADIDPTEVECILTDSSDDDGDCDSFDDDNLVGLEADSDEPSAIFSSMKVKEESSGKTDKTGTGLLENVDLLERTMQELFQDENLQDVALAGNKSDQQVKIEQAKAKRKGIVCEICRGKFSTKEGPRQLLDHLNSLHGYTIAPYCTPKEFVCTVRGCREVFSTQGSLSYHLSEVHQQEQKIIDAESFKIFQCPYCALHSTSKLAMRQHVFNFHRENYVCDNPLEDLAHRCRHCSGLFWRTEDRDDHQVEAHKDKMDTFFKCYVCSHLYSSKNVHSESRRRDCSLCGKVLWSKRAHAIHYRMKHSAASKVGFRCRICQKRFDSKDESLCGKVLWSKRAHAIHYRMKHSAASKVGFRCRICQKRFDSKDERKLHYQVDHEGESPYHCAECGKGFASKSGMYGHRQLHTGSGVSKCQYCGKEFTKLKYHIRKHTGEGLINCEICSKSFTNSFALKEHRVIHNRQTQILCQQCGKGFNSEKYLQRHVAIVHEPSHTFTCPLCPKAFSQQARLKAHLMTHTGVKHIKCLLCEKAYSVRKSLRRHLLEKHEISPEHPQYKHCFYAMSAAEAGLHIPEGVPTNISGEPTEDDDSTSQSSPKEEEEEKPLAKKSPKKGTPGRKPSTSAAFEDYSSIPSGKNDVQKTKGKKSPTTKKAWSKQTESQSTPGTSGEGRHRILKKSRQKTSPRKVTKKGEVDESDLLPAGSDEENESRSSTPEVRRRGRPRKKRANSNASARVQPPKTRGSPMRKLQQQQQLNQESELLHQEQEQEFEMEIPAAAPPTATKRSPPPTPNLGTTRKKRRVEAIVETLQKSTGSPSGSSPKEDDDDEEDEEEDGEESESELAAGDDPRIEIPVVGIGATNDDYNQSSGANDDQVGSSTDFGGVVEDTTEEMNEDDFDLPVRTELESYEDDGNCSGGGFDAVPTLARITPLITRNNPKKGIHRTGDSGKRYVQNLQARTSKDGDDEYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -