Basic Information

Insect: Blattella germanica
Gene Symbol: PLAGL2
Assembly: GCA_003018175.1
Location: PYGN01000099.1:434463-466260[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.048 2.8 9.2 0.5 1 23 247 269 247 269 0.97

2 7 4.2e-05 0.0024 18.8 0.2 3 23 277 298 275 298 0.96

3 7 0.00022 0.013 16.6 1.3 1 23 304 327 304 327 0.96

4 7 0.00066 0.038 15.1 0.2 1 23 334 356 334 356 0.97

5 7 1.2 70 4.8 1.9 1 23 362 385 362 385 0.96

6 7 0.00069 0.04 15.0 4.7 1 23 390 412 390 412 0.93

7 7 0.0081 0.46 11.7 2.5 1 19 418 436 418 438 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.048	2.8	9.2	0.5	1	23	247	269	247	269	0.97
2	7	4.2e-05	0.0024	18.8	0.2	3	23	277	298	275	298	0.96
3	7	0.00022	0.013	16.6	1.3	1	23	304	327	304	327	0.96
4	7	0.00066	0.038	15.1	0.2	1	23	334	356	334	356	0.97
5	7	1.2	70	4.8	1.9	1	23	362	385	362	385	0.96
6	7	0.00069	0.04	15.0	4.7	1	23	390	412	390	412	0.93
7	7	0.0081	0.46	11.7	2.5	1	19	418	436	418	438	0.96

Sequence Information

Coding Sequence: ATGGATTTAGATGAAAATACTAACGTGCTAGATGAAGTGGAGATCCTATTCCAGAAACTTGAAGGGCttcctgaaaatattaaaaaagctGCATTTAATAGAATTCAGCAAAAGTTACCTAATCAAGAGAAGTGTCAAATTAAAACCGAGGTTGGCGTGAATGAGCAAAAGAAACGGGTTGGTAGAAAGCGCAAAGCGGCATCTGAAGAGAATGGAAGTGAAGATACCAAGGAAAATGTTCTCACAAGTCGTGGTCGCAAGGCAAAGAGAATCAGCTACGCCTACATGCATGAGTTTGGGAAGGACAAAGATGAAGGTGCCAGAAAACATAGGAAAGTTGAGGAAGGAGTGGAAATTAAGCAAGAATTTAAACCCACAGTGAAGGTAAAGCACCTTGATGAAAAGGATGGACTGGAAGAGGTGAAAACGGAAGATTCCACCAAAGATCAGACGGAAATAGAAGTCAAAATCAAAGATATTGTGAATTTGGAAAATCAGAATTCGGAGGCAGTGGATGACCCACTTGCTTTGGATGATGTGGTAATTGAAAAACAAGTTAAAATTACAAAAGGAAGCGCAAGCTTGCTCGCTCTGGTGTACTGTCATGTCAGGATTGTAACTTCATCACTGGTAGCAAGTCGTTACTACACATCCACACAAGGCGTCACACAGGCATCAAACCCTACGTGTGCCCTGATTGCGGCAAAGCCTTTCCACAGTCGTCAGGCCTCACGAGACTATCCCTGTGATTACTGTGAATACAAAGCTTATACTAAAGTTGACAAGCTTCGTCACATGACGATCCACACAGGAGAACGCAACCAAATCTGCCAGTACTGTGGAAAAGCCTTTGCCAAAGACTCAACTTTGAGAGAGCATGTACGCAGCATACATGAGAGGCCATTCAAACACATCTGTAGCGAGTGTGGCTTTACGACGTATCGCGCCAACAACTTGAGAGTGCATGTGCGCATGAGGCATCGGGGAGAGTACAACAATCACGTGTGTCCAGTTTGTGGGGCAAGGGTCAAGCAGAGGAATGCATTCCTGGAACATATGCGGGCACACACGGGGGAAAAGCCTTACAGATGTGATCAGTGCAGCAGTTCCTTTGCCTGCCTTGCCAGATTGACAGTTCACCGGAAGTCAGTTCACGAGCCCCGTCAATTCCCATGCACCGAGTGCCGAAAGACCTTTCAGACCAAACACCACCTGCTGCGCCATTCTGTGATACACACCAAAGAGAAACCATTTACCTGCCCCTTTTGTACATACTCTTGCAACAATCAAGGCAACATGACTAAACACAAAGTGTTCCAAAATAAGTGCAAAAGGTCGAACTCTGTCTACAGCAGCAAGGACAACATTTCCAGCATCTTCTGTAAGACTGGACGACCTGTTACTCTGGATGAACTACGGGAAAGGGAAACTGAGAAACAGAAGAGAATCAGCGCGGAGGTAGAACAAGCAAAAATAAAACGTCTGTCGCGTATCAATGCTCCCGAACACTCGTATCATTCTCGACCCGCTAAGGTGAAGCTGGAAGAAGAGACGGTTGACCCTTCGACACTCATTCTGCAGGTAGCAGCCCAGAATGCCGAGTCTGTCACTGAGGAGGATCAAAATAATATGGTGCATGTGGATTTGTTACCAGTGATCCACATACAGACAACGGATCCGCTTCAAACAATGGAAATGCAGGATGGTAACGGAGAGTACGAGACTGTCATCTTTGCAAATGGCGAGGATGGAGAATTTGTGCCAGCGCAAGTGTTTGAACTTTGTCTGAACTCCGAACTCATGGAGGGCAATGCTATCCAGGTTGTGCGCCCAGGACTATCAAAGCAGGAACATATTTATGACTCGGAACAACCTGCTGTGGACTTCATTACAAATAAAGAACCCGACACTGTCGTAGTGATCATCAACACGGAAGCGGAACATCACAACCCATGA
Protein Sequence: MDLDENTNVLDEVEILFQKLEGLPENIKKAAFNRIQQKLPNQEKCQIKTEVGVNEQKKRVGRKRKAASEENGSEDTKENVLTSRGRKAKRISYAYMHEFGKDKDEGARKHRKVEEGVEIKQEFKPTVKVKHLDEKDGLEEVKTEDSTKDQTEIEVKIKDIVNLENQNSEAVDDPLALDDVVIEKQVKITKGSASLLALVYCHVRIVTSSLVASRYYTSTQGVTQASNPTCALIAAKPFHSRQASRDYPCDYCEYKAYTKVDKLRHMTIHTGERNQICQYCGKAFAKDSTLREHVRSIHERPFKHICSECGFTTYRANNLRVHVRMRHRGEYNNHVCPVCGARVKQRNAFLEHMRAHTGEKPYRCDQCSSSFACLARLTVHRKSVHEPRQFPCTECRKTFQTKHHLLRHSVIHTKEKPFTCPFCTYSCNNQGNMTKHKVFQNKCKRSNSVYSSKDNISSIFCKTGRPVTLDELRERETEKQKRISAEVEQAKIKRLSRINAPEHSYHSRPAKVKLEEETVDPSTLILQVAAQNAESVTEEDQNNMVHVDLLPVIHIQTTDPLQTMEMQDGNGEYETVIFANGEDGEFVPAQVFELCLNSELMEGNAIQVVRPGLSKQEHIYDSEQPAVDFITNKEPDTVVVIINTEAEHHNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -