Basic Information

Insect: Blattella germanica
Gene Symbol: ECU06_1150
Assembly: GCA_003018175.1
Location: PYGN01000118.1:1074117-1091644[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.97 56 5.1 0.1 2 23 9 30 8 30 0.95

2 15 2.9 1.7e+02 3.6 5.5 1 23 520 543 520 543 0.94

3 15 0.00015 0.0086 17.1 1.0 1 23 637 660 637 660 0.97

4 15 0.075 4.3 8.6 0.3 3 23 670 690 669 690 0.97

5 15 2.5e-05 0.0014 19.6 1.3 2 23 693 714 692 714 0.97

6 15 3e-05 0.0017 19.3 1.9 1 23 720 742 720 742 0.98

7 15 6.1e-06 0.00035 21.5 2.4 2 23 749 770 748 771 0.95

8 15 0.2 12 7.2 3.0 5 23 784 802 783 802 0.96

9 15 0.00019 0.011 16.8 4.6 3 23 809 830 807 830 0.95

10 15 0.0013 0.076 14.1 0.1 2 23 846 866 845 866 0.97

11 15 1e-05 0.00059 20.8 1.2 1 20 872 891 872 894 0.92

12 15 0.0029 0.17 13.0 4.2 1 23 902 924 902 924 0.98

13 15 0.043 2.5 9.4 8.6 1 23 930 952 930 952 0.98

14 15 2.9e-06 0.00017 22.5 3.3 1 23 958 980 958 980 0.98

15 15 0.0031 0.18 12.9 5.4 1 23 986 1008 986 1009 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.97	56	5.1	0.1	2	23	9	30	8	30	0.95
2	15	2.9	1.7e+02	3.6	5.5	1	23	520	543	520	543	0.94
3	15	0.00015	0.0086	17.1	1.0	1	23	637	660	637	660	0.97
4	15	0.075	4.3	8.6	0.3	3	23	670	690	669	690	0.97
5	15	2.5e-05	0.0014	19.6	1.3	2	23	693	714	692	714	0.97
6	15	3e-05	0.0017	19.3	1.9	1	23	720	742	720	742	0.98
7	15	6.1e-06	0.00035	21.5	2.4	2	23	749	770	748	771	0.95
8	15	0.2	12	7.2	3.0	5	23	784	802	783	802	0.96
9	15	0.00019	0.011	16.8	4.6	3	23	809	830	807	830	0.95
10	15	0.0013	0.076	14.1	0.1	2	23	846	866	845	866	0.97
11	15	1e-05	0.00059	20.8	1.2	1	20	872	891	872	894	0.92
12	15	0.0029	0.17	13.0	4.2	1	23	902	924	902	924	0.98
13	15	0.043	2.5	9.4	8.6	1	23	930	952	930	952	0.98
14	15	2.9e-06	0.00017	22.5	3.3	1	23	958	980	958	980	0.98
15	15	0.0031	0.18	12.9	5.4	1	23	986	1008	986	1009	0.95

Sequence Information

Coding Sequence: ATGGAGAACGGGGTAAGTCCTGTATCTTGTCCCGTATGTACATTATATCTGCGAGAAGGCGTTACTCTGCAAAGCCATCTCAACACTCATCCAAAAGATCAAGTAATTGCTGCTTTAGTAAGAATATCAGGGGGGAAAGTTGGTACAACAGATATAGAGGCAGCTAATACTAGTCAGCAGCAGGAAGAATTCACTCCTTCAGGAAGCAGTCATTTTACAACAGCCATAACCTATCAGCAGTACCTGAGCAGCAATGGTTCTGCACCACAGTATATTTCAATGCCAACCATTCTTTCAGCTCCAAGTACTGCCACGCACTCAACTACGAACCAAGCAGCATTTATGCAGATGTTGTATAACCCATATGTGAtccagcagcaacaacaacagttTCAATTATTGAGCTCAGTGACTTCTCCTACACATCCTCAATCATATGTCCGTCATGTTGTGCCCCCTTATCCCTCTCAATCAGTCAGTATTCCCTTTCAACCAAACTCTGCATTTCCTACAGACTTGCCTCCTCAGGGATTCCAGAATACAAATGGAGTCTTATCCTCATCTGCCCCTCTTCCAACTTCAAATTCTTCTTCCAGTTTACCATGTCCAGTATCATCAGAAAGTACAGTTCACATCACCCAGGGTGAGCCAGACGTGGCAAATGGAATTAATGTGCCTGAGATGTCTGAGCAGAGTAAAGATGCTGCTATTCCACAAGACCTTGAAGGACATAATCCTGAAAGTGAAAAGGATACTTGTAGTACTGGTGTTGCAACACAAACAATACTTTGTGACGAAGAAGACCAGAAGAGTCCCAAAGATGAACAGAGCTTTATAGAAAATGAGAAAGTGGAAGAAGTTGAATCTGGACCCATTGAATCGCCACGAAATGATGCTGTTCGTGTAAGAACTGATTTAAATGATGTTGCTGTAAGTCCTATGGACAATCCTGATTCTCTTGATAGAGAGTCAGAGGACCAGTATGCAAACGGTGATGTGTCTCAGATATCAGGTATCATCAGGAATGCTCTGCGGATACAGACTCCTCCATTACCCCCCATGACACCTGCAGATAATGAATATATAACATACGATCAACCAGAAAATACAGATTGCATGCCATCCAAAGATGATactgtaaaagaaaaagaaaatgttgaagaAACTACAAATAGGTTTTTAGATCTAGATTCCAGTGAAACagttaatataattgaaattgatggtATTCATATCCTTGTTCCGTCTGAATTTCTTGAAAAATCAGCTGCCATATTGGAAAATACTGAAGAAGCTCCAAGGGAAACTGATGTGGATGCCTCTTCTGTAAATATCCAAACTGATGAAACCATGCCACCTCGAGGAGAACTGTCTGAACAGGAGAGTGTGGGAGGAAACGATAGTTCAATGTGGGTTCAGGCTTTCCATGAAAAAGAAGTTTCCACATCATATGACCTACTAGCACGAGAGAGTTGGGAAGCTTCAGATGGATCAGATGTTGATTCTTCTATTCAAACAAACACTCCGAAATTTAAGAAAACTCGACAGTCTAGAGTCTACAAATGTTCCACTTGTGGAGAACAATTTAACTGCCCCAAAGAACGGCGAGTACATCATAGCACATTCCATTCAGTTAAAAGTACAAACAGAGAGGCTGAGACTTCAAGTAGTCGGAAGTCAGGAAGtgtatacaaacaaaatactCAGGCAAGAAAAACAGTAGAAGTTGAAGCTGACAGATCCGAACAAAATCAATTTTTGAAGGTGTTCCTGACAGAAAGTCAGATAGAACCTGAGGAAAAGGAACCCCTGAAATCAGAAGAAAAGCCTGCAGAGAATAACATCCAAACTGAGGTTAAACTTGAACCAAGTGCGATTGTTCCTAAGGAAGAAGATGTGAAAACTGAGTTTCCATGCACTATATGTGATGAAGTGTTCACGACTTCAAAACAGCGGAATAGTCATGAGCGCAAATCTCATAAGAAATCCaaggaaaagaaaaatatttgtggAACTTGTAAAGAAGAATTTCCAAATGATGCAGAATATCATGTTCACTTACAGACCCATCCTTTGGAATGCTCACAATGTGGAAAATTTTTCTATAGGCGACAGAACTTAGAACTTCACGTAAAGCGTCATCTTGGTATCAGACCTCATAAGTGTACAATTTGTGATAAGGCATTTGTGACGAAGCAAAAATTAGCAGAACATACTAATTCACATACAGGGAATGCTCCGATCAAGTGTCCTCTCTGCGATGAGACATTTCGTCGTTACAGTAATTTGATTCAGCACAAGCAACGTCATCATTTGAACATCAAGAAGAAAGTAAAAGATTTCATCTGTCATTGTGGTGAAGTCTTTCATTCCAAAAAGAAGTTGGAATGGCATAAGGAGATACACGAAGAAAAACCTAAGTGCTGTACATATTGCAGTGAACGTTTTGTACATTCGGCCAGTCTGACAAGACACATTCGTAAGGCACACGACTGTCGTTATGTCCCTAAATGTGGACGTGAGGTGGAGAACATAGAATGCAACATATGTGGCTATATATTCTTGAAAAGTTCAATGGCCGTTCATATGCGCATGCACAGTGGTGAAAGACCTTATCCATGCCATGTGTGTGGAAAAGAATTTACTACAAAATGGAACTTGCAGCTGCATCGCTGGACACATGCTGCTCGCAGTACCAAACCATTCAAGTGCTCACTTTGCAAGAGTGCATTCTTCCGTCGTAGCGATTACACTGCTCACATGCATTCCCATCGTAACGTTCGCCCTTACACTTGCAATCACTGTGGTTGTCAGTTTATTCGCAAATACAACTGTTTGCGTCATGTACGCGAGCATGAAGTCAACAaatctttcaactgcaatgtatGTGGAAAATCTTTTCATCGTAGTTATTATTTGAAAGAGCACCTGCGTGTGCACAGTGGTGCACGTCCATTTGCTTGTCACATTTGTGGGAAAGCATCTAGCACCAAATCAAATCACAACAAACACGTGAAGATTCATCATGCTCGAGAACCTGTCAATACAGAGggctaa
Protein Sequence: MENGVSPVSCPVCTLYLREGVTLQSHLNTHPKDQVIAALVRISGGKVGTTDIEAANTSQQQEEFTPSGSSHFTTAITYQQYLSSNGSAPQYISMPTILSAPSTATHSTTNQAAFMQMLYNPYVIQQQQQQFQLLSSVTSPTHPQSYVRHVVPPYPSQSVSIPFQPNSAFPTDLPPQGFQNTNGVLSSSAPLPTSNSSSSLPCPVSSESTVHITQGEPDVANGINVPEMSEQSKDAAIPQDLEGHNPESEKDTCSTGVATQTILCDEEDQKSPKDEQSFIENEKVEEVESGPIESPRNDAVRVRTDLNDVAVSPMDNPDSLDRESEDQYANGDVSQISGIIRNALRIQTPPLPPMTPADNEYITYDQPENTDCMPSKDDTVKEKENVEETTNRFLDLDSSETVNIIEIDGIHILVPSEFLEKSAAILENTEEAPRETDVDASSVNIQTDETMPPRGELSEQESVGGNDSSMWVQAFHEKEVSTSYDLLARESWEASDGSDVDSSIQTNTPKFKKTRQSRVYKCSTCGEQFNCPKERRVHHSTFHSVKSTNREAETSSSRKSGSVYKQNTQARKTVEVEADRSEQNQFLKVFLTESQIEPEEKEPLKSEEKPAENNIQTEVKLEPSAIVPKEEDVKTEFPCTICDEVFTTSKQRNSHERKSHKKSKEKKNICGTCKEEFPNDAEYHVHLQTHPLECSQCGKFFYRRQNLELHVKRHLGIRPHKCTICDKAFVTKQKLAEHTNSHTGNAPIKCPLCDETFRRYSNLIQHKQRHHLNIKKKVKDFICHCGEVFHSKKKLEWHKEIHEEKPKCCTYCSERFVHSASLTRHIRKAHDCRYVPKCGREVENIECNICGYIFLKSSMAVHMRMHSGERPYPCHVCGKEFTTKWNLQLHRWTHAARSTKPFKCSLCKSAFFRRSDYTAHMHSHRNVRPYTCNHCGCQFIRKYNCLRHVREHEVNKSFNCNVCGKSFHRSYYLKEHLRVHSGARPFACHICGKASSTKSNHNKHVKIHHAREPVNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -