Bger012148.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blattella germanica
Gene Symbol
znf711
Assembly
GCA_003018175.1
Location
PYGN01001569.1:83781-89888[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00037 0.021 15.9 1.4 1 23 178 201 178 201 0.97
2 16 1e-05 0.00057 20.8 0.4 2 23 309 330 309 330 0.97
3 16 0.00044 0.025 15.6 1.0 2 23 336 358 335 358 0.95
4 16 0.00019 0.011 16.8 0.3 2 23 369 390 368 390 0.96
5 16 0.00036 0.021 15.9 4.1 1 23 392 414 392 414 0.98
6 16 0.0098 0.57 11.4 2.3 1 23 420 442 420 443 0.95
7 16 7.7e-06 0.00044 21.2 0.4 2 23 512 533 512 533 0.97
8 16 0.0055 0.32 12.2 2.2 1 23 539 562 539 562 0.98
9 16 0.00061 0.035 15.2 7.7 1 23 596 618 596 618 0.98
10 16 0.049 2.8 9.2 1.0 1 23 624 647 624 647 0.98
11 16 0.014 0.83 10.9 0.0 2 19 696 713 695 716 0.93
12 16 0.00098 0.057 14.5 3.5 3 23 722 742 720 742 0.98
13 16 0.0041 0.24 12.6 0.9 1 23 748 771 748 771 0.98
14 16 0.0019 0.11 13.7 4.2 1 23 785 807 785 807 0.98
15 16 0.0025 0.15 13.2 3.0 1 23 813 836 813 836 0.97
16 16 1.2 68 4.8 0.9 1 13 842 854 842 856 0.89

Sequence Information

Coding Sequence
ATGGATGTGAATGAAATAACTTTTGAATCTGACAATGATAGCCCTTTAGCATTGTTATTGTCTAAAGGATTTTCACCCCATCCAAAAGATCAAGATCCTTATCAAATCAATCTTCCTATAAAAGGAGAGGAAAGCCATTGTTTACAGAGAATAGAAGCTCAAGTGGAAAGTCTTAAATATGCTACTCAAATAGAGAGAGACACTTCAATTATCAACTTATCTAGTAAAACTAACATACAGGTACATGAAAGAAACATGCCAGTTGAAGTCTATTCCAGTATTGAgagtttgaaaaatgaaattaaagtaGAAAGCgaaaaattaaatagttcttgTTCTGTTGACCAAGCTAAACAGGATAATATTAATATCCAGAATTTACCAAACAAGACTCAAGACAGTGGGATAAAATTAAACTCTGAAATATTACATTTCTTGCGTGCTGAGGAAAAAACACTAGCCCCTGAAAGACCACAAAGCAATTCATGCCAGAAACAACCAGAGAATATCCAAACATATAAACAGAGATCATATACATGTGAAGTTTGTAAGAAGACTTTTCTGACTAATGAGAGTCTGAAAGTTCATACTCAAAAATTACATTCtcaagtagaagaagaagaagaagaacatgaGGCCAGTAATGTTGAGAGTGAGAATGAGAAAGAAAGTACTGGAAAAGAATCAGAAACTGAAGAAGCTCAAGAAATTCAGCAAATAGAAGAAGTTCTACTATCAGAAGAAAGTGAAGAAGAGAGCGAGGAGGAGGATGATGATGAAGACGATAAAGACTTTGTAATTTCACCAAGACGAGGAGCAGGACGAGGTCGAGGTGCAGGAAGAGGTCGAGTTGCAGGAAGAGGCAGAGGTAGGGGTAGAGGGAGAGGAAGACCTCCAACAGCGGGAAAATCTAAAGGCAGAGAAAAATGTGAAGTTTGCAATAAAACATTTGCAGGTGCTTATGAACTTAAAAGACATATGAGTCTTCACGTGCGAGATGGTTGCAAGTGTGAATTCTGTGGTGAAACATTCTACGCAGCTACTAACTTGGCTTCTCATATTCGTGAGTTCCATAAGATCAGTGCAGACAATAAAGACTTCTCAAAGTGTAATATTTGCTCTTTGGCATTCATCAACGAAGATGCCCTTAAGAAACATCAACAGGACCATCCATTCAGCTGCGATGCTTGTGGCAAACACTTTACGACCAACAGAACATATTCATCGCATATGAATAAGCATTCCAGTGAGAAAGTGTATCAATGCGAGTACTGCAATAAATCTTACTTAATTGCAGACAGTCTCCGTTCACACAAAAGAGACCACCACAAGGAAGAGCAAGCAAAAGAATCTGATAAAGAAAGGAATCCTCAAAGCCAGAAAAATGAATCAAATGACGAGTCTGATGCAGAACCTCCATTAAAAATGGCAAGAAACAGTGACGAACCAGAATCTTCTAGTGTGCCTAAAAGAAGAAAATCAGCAACTAATAAATTAGAGAAAGTTACAAAATCTAAAGATAAAACAAAACCAAAATGTGATATTTGTAACAAAACCTTCATTGGACCTTATGAACTAAAAAGACACTTGAATCTTCACACGAGAGATAAAGCATTTAGGTGTGTTTATTGTACAAAACTGTTTTTTAGAGACACAAGTTTGGCAAGTCATATTCGAAAGTATCATAAGCAAATTGAAGATAACCCACGCTTCCGTAAATGTCGAGTATGCTGTATAGCTTTTCTTGATGAGGAAGCATTGAAGAAACATATGGAAGAAAATCCTTACAGCTGCAATTCCTGCAATAAACATTACACAACAAGCCATAGTTTCAAGGCACATATGAACAAGCACTCTAGTGGTAAATCATACCAGTGTGACTTGTGTACTGCTTCTTTCTTGATGGCTGATGATCTCAGATCACATGCTAGGAAGTGTCACAGATCTGGTCAGAAAGATGGAATACAGGAACAAGATGGTTGTCAAAATAATGGCACCAGTGACTTTGACAATACAAAAACCAACAAGCCAAAAACAGAAAGTGCGAACAAATCTTTTGATGGAAATGGAAACTTTGGGAATGTACAGTGTGATGTTTGCAATGAAATGTTCGGTTCAAGCGGTGAACTTGAAACACACAAtcaaaattcaacacaatatggtTGCAAAATATGTCGCAAACATTTTAAATCCTTCATAAGTTTGAAACTTCACATGAATATGCATTCAAAAAAGACTGTCTATCAGTGTGAGTATTGCACAAAGCCATATTTAATCATGAGTAGTCTGCGAACTCATATTCGTACACAACATCCTGGACAGGTTCAGATAACTGACAATCGTATTACATCTTATTTCTGTCATATCTGTGATCAGAAGTTTCCTCTGTATAAAGATTTGGTTACACACATGCATACACACAAGGGTACAAAGCCATTCAAGTGTGATCAATGTGATAGGCAATTCTCTGTTAGCATACATCTCGATGTACATAAGAAACGTAGGCACAACAACCTCAAACCCTACAATTGTGATATTTGTCATGAGCCATTCTTTAGGAAAAACAGCGAACATCCTGCTGTTCTCATAAACCTCATCTCTGCTGATGTTAATCTTTTTTCATTGGTCTTTTTGATGGTTCAGGCCAAAGTGAGAATTGATCTGGCCAGTAAAACATAA
Protein Sequence
MDVNEITFESDNDSPLALLLSKGFSPHPKDQDPYQINLPIKGEESHCLQRIEAQVESLKYATQIERDTSIINLSSKTNIQVHERNMPVEVYSSIESLKNEIKVESEKLNSSCSVDQAKQDNINIQNLPNKTQDSGIKLNSEILHFLRAEEKTLAPERPQSNSCQKQPENIQTYKQRSYTCEVCKKTFLTNESLKVHTQKLHSQVEEEEEEHEASNVESENEKESTGKESETEEAQEIQQIEEVLLSEESEEESEEEDDDEDDKDFVISPRRGAGRGRGAGRGRVAGRGRGRGRGRGRPPTAGKSKGREKCEVCNKTFAGAYELKRHMSLHVRDGCKCEFCGETFYAATNLASHIREFHKISADNKDFSKCNICSLAFINEDALKKHQQDHPFSCDACGKHFTTNRTYSSHMNKHSSEKVYQCEYCNKSYLIADSLRSHKRDHHKEEQAKESDKERNPQSQKNESNDESDAEPPLKMARNSDEPESSSVPKRRKSATNKLEKVTKSKDKTKPKCDICNKTFIGPYELKRHLNLHTRDKAFRCVYCTKLFFRDTSLASHIRKYHKQIEDNPRFRKCRVCCIAFLDEEALKKHMEENPYSCNSCNKHYTTSHSFKAHMNKHSSGKSYQCDLCTASFLMADDLRSHARKCHRSGQKDGIQEQDGCQNNGTSDFDNTKTNKPKTESANKSFDGNGNFGNVQCDVCNEMFGSSGELETHNQNSTQYGCKICRKHFKSFISLKLHMNMHSKKTVYQCEYCTKPYLIMSSLRTHIRTQHPGQVQITDNRITSYFCHICDQKFPLYKDLVTHMHTHKGTKPFKCDQCDRQFSVSIHLDVHKKRRHNNLKPYNCDICHEPFFRKNSEHPAVLINLISADVNLFSLVFLMVQAKVRIDLASKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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