Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01000092.1:957189-969146[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.28 16 6.8 0.7 1 23 189 211 189 211 0.98

2 21 0.027 1.5 10.0 0.9 1 23 217 240 217 240 0.96

3 21 2.1 1.2e+02 4.1 4.4 1 23 265 287 265 287 0.97

4 21 0.00064 0.037 15.1 0.3 1 23 293 315 293 315 0.98

5 21 0.017 0.99 10.6 0.3 1 23 318 340 318 340 0.94

6 21 0.019 1.1 10.5 0.8 1 23 552 574 552 574 0.98

7 21 2.7e-06 0.00016 22.6 2.5 1 23 582 604 582 604 0.97

8 21 0.2 11 7.3 0.6 2 23 612 634 611 634 0.92

9 21 0.0086 0.5 11.6 2.6 2 23 639 660 638 660 0.96

10 21 1.4 80 4.6 5.4 1 23 666 689 666 689 0.91

11 21 0.00014 0.0083 17.1 6.1 1 23 702 724 702 724 0.99

12 21 0.19 11 7.3 0.8 2 23 732 754 732 754 0.92

13 21 0.78 45 5.4 7.0 1 23 758 780 758 780 0.94

14 21 0.028 1.6 10.0 1.5 1 23 786 809 786 809 0.95

15 21 0.35 20 6.5 1.6 3 23 814 834 813 834 0.97

16 21 1.6e-06 9.2e-05 23.3 0.5 1 23 841 863 841 863 0.98

17 21 4.5 2.6e+02 3.0 0.2 2 23 870 891 869 891 0.83

18 21 3.8e-05 0.0022 19.0 2.0 1 23 897 919 897 919 0.98

19 21 5.6e-05 0.0032 18.4 2.4 1 23 925 948 925 948 0.98

20 21 8.9e-07 5.2e-05 24.1 1.4 1 23 954 976 954 976 0.98

21 21 9e-07 5.2e-05 24.1 0.8 1 23 982 1005 982 1005 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.28	16	6.8	0.7	1	23	189	211	189	211	0.98
2	21	0.027	1.5	10.0	0.9	1	23	217	240	217	240	0.96
3	21	2.1	1.2e+02	4.1	4.4	1	23	265	287	265	287	0.97
4	21	0.00064	0.037	15.1	0.3	1	23	293	315	293	315	0.98
5	21	0.017	0.99	10.6	0.3	1	23	318	340	318	340	0.94
6	21	0.019	1.1	10.5	0.8	1	23	552	574	552	574	0.98
7	21	2.7e-06	0.00016	22.6	2.5	1	23	582	604	582	604	0.97
8	21	0.2	11	7.3	0.6	2	23	612	634	611	634	0.92
9	21	0.0086	0.5	11.6	2.6	2	23	639	660	638	660	0.96
10	21	1.4	80	4.6	5.4	1	23	666	689	666	689	0.91
11	21	0.00014	0.0083	17.1	6.1	1	23	702	724	702	724	0.99
12	21	0.19	11	7.3	0.8	2	23	732	754	732	754	0.92
13	21	0.78	45	5.4	7.0	1	23	758	780	758	780	0.94
14	21	0.028	1.6	10.0	1.5	1	23	786	809	786	809	0.95
15	21	0.35	20	6.5	1.6	3	23	814	834	813	834	0.97
16	21	1.6e-06	9.2e-05	23.3	0.5	1	23	841	863	841	863	0.98
17	21	4.5	2.6e+02	3.0	0.2	2	23	870	891	869	891	0.83
18	21	3.8e-05	0.0022	19.0	2.0	1	23	897	919	897	919	0.98
19	21	5.6e-05	0.0032	18.4	2.4	1	23	925	948	925	948	0.98
20	21	8.9e-07	5.2e-05	24.1	1.4	1	23	954	976	954	976	0.98
21	21	9e-07	5.2e-05	24.1	0.8	1	23	982	1005	982	1005	0.96

Sequence Information

Coding Sequence: ATGAAGAGACGAAAGGTACAGGCATTAAGGAAGgtGCCAGATAATAGACAATTGAAGATAAAGAATATGGATAAAGTTGACCGTAATTTAACCCACTGTTTTGTCTGTGATGGTTTGGTTAGTGGCAAAGGCACTTCACTTCTGAAGGGTTGTGCACCTTATTCTAAAAATTCATTGACAAAAAAAATTGGTGAACTAATGGGTGAAAGATTTATGATAATAGTATCAGTAGATGATGTTCTATGTCGAAGATGTTCTTCGTTGATCATCCGACTGGATAAATTGGAAGTCGACGTGCAAGTTGTGAAAAATGCATTGACTGGCTATTTGAAAATGAAGTATAATTTGTATGAGGATGACACTGTATCCGCTAATGAATATAGTAGAGAAGCATTAGAGGAAAACgcaCTTGATGAGCTTGGCTGTGATGATCAGTATATTTTCCAAGCAATGAAAGGTGTTGATTTGGAATATTCAGATGAAGATAATGTTACCCCAAGCATCAAACAAGAATTCATGGAAACAGAAGAAAGTGAAAATGTTTCAGATTCGGAAGTTACAGGTTACAAATGTGTATCCTGCCAGTTCAAAACATCTGTATCTGAAGAGTTTTTGGAACATTTGAAAATTCATTCcagtgaaatgtattttaaatgctCTAATTGTGATACGGAATTTCAAAGTCATTGGGAAATACAAGAGCACATTACAAGCGTTCATAAATCACAAGCGATAGAATTTGAAGGGAGTATAGTTGAGGGCAATGTGCCAGATCAATTTCCGTTAACAGTTTACGAATGTAGTGTCTGTAAATTTCAGTGCCCAGACAAATCTGTTTTTGACAGACATGTATGCCAACATGAAAGAACATCCCATTATAAGTGTTCGATTTGTTTTGAAGCACTCAGTTCAAAAGAACTCCTTAAAGAACATATGGACAATCATAAACTGTTTCAGTGTGGATTGTGTAATGCAACATTTAAGGAGAGGAATGATTTATTGGAGCATTTTGAGGAACATAACATTTCACAGGACTTTCAAGTTAAACCGGAACAAACTGAAGAAGCAACCAATGAAAACCGTAAGGAGTACGTTGAATCAACTCACCATGAAGCCGAAGAAGATAATTCTGTTCCCTCTGCTGATAAAGAAATTGACTATGGTGCAGTGGAAGCAGTGCTTGAACGGATACATTCTGAAAATCCTATTCCTGTAAAAAGCAGCATGTCAGAGATCGGTGAAAGTGAAAACATATCTGAACAGGACGTTCAGGAAGGTGTTGTAAAGGATGAAAGCATAAACAAAGAACAGTGCTCCGATGAACAGGTTATGCTTGAAAAGGAATATGGTGAAGTTTCTGGAAACTTTCAGGAAACAATTTTTCAATTAGATAATGCCATATTTTCCAAGGACGATGATCACTTATCTACAGATATGGATAAAAATGAAGGCAGTGAGACGAATGATATTCTTAATGATCCTACTCAGTTTTTGGAAGAATTCCAAATGAGTACCGAAAATCCAGAAACTCAGTCCTTGAATGATGAAAATCAACTTACTACTGCTGAAAATAACGAAAATGTAGATAATTGTTCCTCTGAAAATAAAAAGGATGATTCAAACAATGTAGCATCGCTCGCAAAAAGGAGAGTTTATGTCTGCTCTATTTGTGGCTTGAGAGCATACTCAGAAAACCAGATGAAGAGACATTTTAAGAGTCATATAGccttagaaaagaaaatatttgagtgTCATATATGCAACAAAGTGTTGACGACTCGCAGTAATTTAAATAGACACCTTTCGAATCATGAGAATTGCCCAGGTGCAGTTACTTGCAAATTGTGCAATGAAGAGCTCATTGACAGACTACATTTGAAACAACACCTTGAAGACCAGCATACTGGGCCTCTGCATTGCTCATTTTGCGACATGGAGTTTACTAATAAGAGGGCCTTCAAAGAACACGAATTAACTCACCCGGAGAGAGCTATTCACCAGTGTGATATATGTCATAAAAGATTTTTAACTCATCTTCGTCTAAGAACTCATCTTGAAAATATACATAATGATTCAAAAGATGGTGATACCGAGGATAAAATCTATAAGTGTCATATTTGTTCTAAGATTCTTACAACATACCATAACTTGAAAAGACATGTTAGAAACCACGAGAAAAGTTCGGGGAGTGCTAAGTGTACTCTTTGTTCCGAAGAATTAACGGACAAGTTGCATCTAAGGCAGCATGTCGAGGAGGTGCATCCTGAAACGCATCAATGCTCGTTTTGTCAGAAAGTATTTTCCAATAAGAAGGTTTGCAAAACTCATGAACTGACTCATCCTGAGAGATATGTGTACAAATGTGATATTTGTGAAAAGATGTTTCTTAATGAGACAAGACtagaaaaacacaaaacaatGTTTCACAGAGATCCCCATTGTCGATATTGTGAAAAAGAAATTGAAGATCCAATGAAATTGTTTAACCATGAGCGAAGGCatgaaatgtacaaaaataaatttccGTGCGAATTATGTACCAAAGTGTTCCGGACGCCATCTGGATTGAGATATCACATGTCTACCCACACTGGAAAATACGCAGTGTACTGTGAAATTTGTGGTAAAGGAATGCATTCAGAAATTGTTCTGGAAGAGCATAAAGCAACGCACACTAAAGAGATCCGCTATACATGCGAGTTATGCGGCAGGAACTTTACCTCTAACAGTACGTATCGAATGCATCGAAAATGGCATGACGATCCTTTGCcgtataaatgtaaaatatgtgaTCGCAAATTTAAGCATACTTCTATTTTGGCAGTTCATATGAGACGTGCGCACACGGGTGAACGTCCTTATAAATGTCCTCATTGTCCCTACACTTTCAGTGTAAGCAGTACACTTCAAAAGCATATCATACTTCACACAAAAAAGTACCCTTATAACTGTAAGCTATGTGGCAAAGGATTTACTACTCGTTCAAAACTTGCCAAACATATGGCTAGGGTACATAATGACTATGAAATGGTTAATGCCAAACCCACGCCATGCGAGTATAAAATGGCGTTGAAACCTAGTGAAATATCTTCTAATCCTGAAGAGTCTTCTGTAAAAGAAGACTTAGAGCAACCACAGCTTTCAGATGTTAAATTTGAAGAAGCTGTTGTGGAAGAACAGATTGTCGATGCTGGCCAAGCAATTTTTTTGTTCCAGTGA
Protein Sequence: MKRRKVQALRKVPDNRQLKIKNMDKVDRNLTHCFVCDGLVSGKGTSLLKGCAPYSKNSLTKKIGELMGERFMIIVSVDDVLCRRCSSLIIRLDKLEVDVQVVKNALTGYLKMKYNLYEDDTVSANEYSREALEENALDELGCDDQYIFQAMKGVDLEYSDEDNVTPSIKQEFMETEESENVSDSEVTGYKCVSCQFKTSVSEEFLEHLKIHSSEMYFKCSNCDTEFQSHWEIQEHITSVHKSQAIEFEGSIVEGNVPDQFPLTVYECSVCKFQCPDKSVFDRHVCQHERTSHYKCSICFEALSSKELLKEHMDNHKLFQCGLCNATFKERNDLLEHFEEHNISQDFQVKPEQTEEATNENRKEYVESTHHEAEEDNSVPSADKEIDYGAVEAVLERIHSENPIPVKSSMSEIGESENISEQDVQEGVVKDESINKEQCSDEQVMLEKEYGEVSGNFQETIFQLDNAIFSKDDDHLSTDMDKNEGSETNDILNDPTQFLEEFQMSTENPETQSLNDENQLTTAENNENVDNCSSENKKDDSNNVASLAKRRVYVCSICGLRAYSENQMKRHFKSHIALEKKIFECHICNKVLTTRSNLNRHLSNHENCPGAVTCKLCNEELIDRLHLKQHLEDQHTGPLHCSFCDMEFTNKRAFKEHELTHPERAIHQCDICHKRFLTHLRLRTHLENIHNDSKDGDTEDKIYKCHICSKILTTYHNLKRHVRNHEKSSGSAKCTLCSEELTDKLHLRQHVEEVHPETHQCSFCQKVFSNKKVCKTHELTHPERYVYKCDICEKMFLNETRLEKHKTMFHRDPHCRYCEKEIEDPMKLFNHERRHEMYKNKFPCELCTKVFRTPSGLRYHMSTHTGKYAVYCEICGKGMHSEIVLEEHKATHTKEIRYTCELCGRNFTSNSTYRMHRKWHDDPLPYKCKICDRKFKHTSILAVHMRRAHTGERPYKCPHCPYTFSVSSTLQKHIILHTKKYPYNCKLCGKGFTTRSKLAKHMARVHNDYEMVNAKPTPCEYKMALKPSEISSNPEESSVKEDLEQPQLSDVKFEEAVVEEQIVDAGQAIFLFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -