Basic Information

Insect: Blattella germanica
Gene Symbol: bab1
Assembly: GCA_003018175.1
Location: PYGN01000089.1:1767053-1928017[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 9.1e-06 0.00052 20.9 2.0 3 23 864 884 863 884 0.99

2 10 0.0001 0.006 17.6 1.9 1 23 890 912 890 912 0.98

3 10 1.4e-06 8e-05 23.5 0.5 1 23 920 942 920 942 0.96

4 10 5.4e-05 0.0031 18.5 1.8 1 23 948 970 948 970 0.98

5 10 5.3e-06 0.0003 21.7 0.3 2 23 979 1000 979 1000 0.98

6 10 5e-05 0.0029 18.6 0.3 3 23 1008 1028 1006 1028 0.97

7 10 3e-06 0.00017 22.5 5.5 1 23 1034 1056 1034 1056 0.97

8 10 9.1e-07 5.3e-05 24.1 0.2 1 23 1062 1084 1062 1084 0.97

9 10 0.00059 0.034 15.2 7.3 1 23 1090 1112 1090 1112 0.98

10 10 7.1e-05 0.0041 18.1 2.0 1 21 1118 1138 1118 1139 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	9.1e-06	0.00052	20.9	2.0	3	23	864	884	863	884	0.99
2	10	0.0001	0.006	17.6	1.9	1	23	890	912	890	912	0.98
3	10	1.4e-06	8e-05	23.5	0.5	1	23	920	942	920	942	0.96
4	10	5.4e-05	0.0031	18.5	1.8	1	23	948	970	948	970	0.98
5	10	5.3e-06	0.0003	21.7	0.3	2	23	979	1000	979	1000	0.98
6	10	5e-05	0.0029	18.6	0.3	3	23	1008	1028	1006	1028	0.97
7	10	3e-06	0.00017	22.5	5.5	1	23	1034	1056	1034	1056	0.97
8	10	9.1e-07	5.3e-05	24.1	0.2	1	23	1062	1084	1062	1084	0.97
9	10	0.00059	0.034	15.2	7.3	1	23	1090	1112	1090	1112	0.98
10	10	7.1e-05	0.0041	18.1	2.0	1	21	1118	1138	1118	1139	0.95

Sequence Information

Coding Sequence: ATGGATTCCAACAATCTACAGGTTCGATGGAAGCATCACCAGATCGGAGTAATGGACTATTTGAGACAGCTTCTAGCATCTGAAATGTTCGTCGACGTCACACTCTGCTGTCAGAGCAAAAGATTTAAAGCCCACAGAGTTCTGCTGTCAGCTTGCAGTTCATACTTGCAgAAAGTATTGGTGGAGCACCTGAGCTCCTCAGACCACGTGACGATCATCTTGCCAGACATCCATCCCGAAGACATGCAGTGCCTTCTGGACTTCATGTACACTGGATCAGTAGGTGTTCCAAGATGTCGCTTGGCCTCCTTCCTGCAGGCAGCAGAAGCTCTTCACATAAAGGTCCTTACCGACATGGCTCAGAAACAGAAAACATCCGACAGCGAAAATGTCATCTGCGTTACAGCTTATTCGCCCCCTTCGTTAGACGTAAAATTAGCCAGCGACAACAGTTTCCACAATCGTTTTGAGTCACATGGCATTAAAGCTGATAATTCCTCTGAAGTCACAAAACTCTGCAGATTTAATGATGGTACAAATACACCACCCAACGATTCTAAaagactgttgtctaataaaaCAGAACTCAAAGACATGCACGATGACAAGAATAGCTGCATGTATAAGTGTCCGCTAGATAATTTACCGTACATCACCAGTGCTCAAACTCCTTTAGATCCTAACTGTGTTTCAAACAGGGATATCGTACATAATTCTTTCTATGGCGATGTTTCCAAAAGGACAGTACACCATGGCGATTTGAAAGAATCGGGAAAATCAGAAACTTTCGATGTATTACAAACTATCCCCAACCAATCCAACACAAAGCCTGTGCTTAATTCCATCAATAATCATGAAAAATCACTAGGAAACTCGACAGAAAGTGTAGTTTCAAATTTCTTAGAAAGCTCTATTCGCAATAAGACACCATGTGATGTCCCAACAATAGAAAATACAAACTGTAATGGAAATCCGGCTCATAACTCTGCCCTTCAGAATAAAATAATTCCAACATTGCTCCATGAGAATGAATTCAACAATGACAGAACAGCTATGTCTGAGGAAATTTGTTCTCCAACACAATACGGGTTGCAACCAAGTTCAAATAATGGTTTACATATAATCACAAAAGAAATTAATGATAAAACAATTCCCAACAATCACACACATGAGTACAGACAAGATAAATTGAGTGAGGAATTAATAGCGAGGAATCCATACAGAGGTTATCTTCCCGAAAGTTCAGAAAATTATTCCCAACATTTACAACGTTTGGCACAATGGCCTAAACCAATCCCCTCTCTAATGCCTATTAGCAATAACAGTTATCAGTACAATGGACAAATACCAACGGCCTACTTTAATAAAGACATTAGGCTTAATGGAGTTATCCCTCATAATCAACAGTTTAGAGACACAAGGCTGAGTGATCAGAAAGATGTCCTTCCGGAACATTTGCAAAACATCAAAAATATAATTCCTAGTATTACTTCAACTTATCAAACTTGTGATATGGGTCCCGCTGCCCAACGATTAATGAAGGACAACAAATGTATGAGAAGTGTCTGGTTTCAAGGAAAAGACAAATTGGTGCATATGAATGGTCAAAGACCCATTTCAGATGCGAAGTCTTCAGTGAAGAGATTGTCCCAAAGGGTTCCTCGGCTGTCCCCTATTGTTCCGCCCTCGCCGTGGGCCCAGAACAACAGACTGCCTTGTGTCGCACCAATGGTGTGTCCCCCTCGGGGTTTCCCTTATCAGGCACCAAGTTGGATAACACCTCATCCACTTCCGCATGCGTTGGCCAGTCCAACTGGACCAGTACATCCACTGCCGAATCCTCTGTGCACAACCCCAAGTCATCAACAACAGACCATCAGCGACCTCACAAGACCTGCAATGGCTGCTCCGGCCCCCAATATGGCTTCTCCTGAAAATATGGATGCTTCACTTCCAGCACACTCAAAAACTCAAACACGACCTGAAAGTAACCACGTTGAACACCAAGATCCGACTAGAAAGAGGTCCTCTGAATCCCTGGACGTTTTCTGCAGACTAAAGGAAAGGCGATTGCAAGAATTCTACAAAGAGCAGatgacaattaaaatgaaaaatggcgGCAATGAAGCGAGTCTTAAAGACGACGAGGTTGCTAGTGACCTTTCGACGAAATATTCTCAAAGTCCGCGGTCCATCAGCGCAAGAAGTAGCCCATGTGACTATGGTTCCCCACTAACACCTTCTCTCCAGCAAAAGCTGAAATCACTGTCCGATTTAACTTCTTCCAAACTATCTGCCATTGAAGAGAGAATTCAGTATAAAGAGAACTTGAAAGAAGAAGATTTTTCCAATTTTCCCAAAAACTGTGATATAATTACGAATAATGTTGAAGTGAAGACGGAACAGGTCGAAGAACAACAACCTGGAAATGAACAAAATGGTGGTGCAGGAGGCGGGAAAATGTACTCTCATGAAGATGATGACGTCCAAATTTTGAATGAAAACAAACCAATATTCACGAAAAACGACAGCAATAACAACAACGGGGTGGTAGTAGACGAAGCAACGCCGGCGGCGAAGAACCACGGGTGCGAGGATTGTGGCAAATGCTTCTCCCGTCGCCAGCTTCTGGTGCAGCACAGGAGGATCCACACCGGAGAGCGACCTTACTCCTGCGCCGACTGTGGGAGACAGTTCACTCAACGCGGCCATTGGAGCACTCACCAGAAACTGCACGAACCCGCACGGAGACCTGAACACGCGTGCCCCAGCTGCGGGAAAGCGTTCGTCACCAGAGCATCTCTCAAGGTGCATCTCCGAACTCACACGGGAGAGAAGCCGTTTCAGTGCGGCGAATGCGGGAAACAGTTCAGTCAGCTGCGCAACTACAAGTACCACCGGAGCGTGCATGAGGGCACCCGCGAGTTCGCGGCCACTTGCCCCGAATGCGGCAAGTACTTCAACGACCGCGGCTACCTCAGCTCGCACATGAAGATCCACCGGAACCGGAAGGAGTACGGCTGCCAATACTGCGGCAAGAGCTTCAACCAGAGAGTCGCCTACAACATGCATGTCCGCATTCACACAGGTGAACGGCCACATTCTTGTCCTCACTGCAACAAATCTTTCTCACGAAAAATGCTGCTCAAACAACATCTTCGCATCCACACTGGAGAGAAGCCGTTTGCATGCAGCGTGTGTGGAAAAGCGTTCGCAGACCGAAGCAATATGACCCTACACATGCGTCTTCATTCAGGAATAAAGCCCTACTCATGTCAACTCTGTTCTAAAGCATTCACGAAGAAGCACCATCTAAAGACACATCTGAACTACCATACAGGAACAAAGCCTTATTCGTGTAGTAAATGTGGACTGCGTTTTAGTCAGTCGAGTAACATGAGGACTCATTATAAGAAGTGCACAAGTACTGGACCTGTGAATTTAGAAACACCAGTGAATAACTCAGAAACTCTCAAATCACCCGTCGCTGAAGGTAACGGAGCAACATCCCCGTCTTCATCGCTGGGGCACAGTGATGTAACAGTCAATTCAGCAGCTGTGATTACGCCTCCTCACTCGGACGAATCATCCTGTGGAAGTTCTGTGATACCACGAAATGCAATTGAAGCACAGCCTGCATGA
Protein Sequence: MDSNNLQVRWKHHQIGVMDYLRQLLASEMFVDVTLCCQSKRFKAHRVLLSACSSYLQKVLVEHLSSSDHVTIILPDIHPEDMQCLLDFMYTGSVGVPRCRLASFLQAAEALHIKVLTDMAQKQKTSDSENVICVTAYSPPSLDVKLASDNSFHNRFESHGIKADNSSEVTKLCRFNDGTNTPPNDSKRLLSNKTELKDMHDDKNSCMYKCPLDNLPYITSAQTPLDPNCVSNRDIVHNSFYGDVSKRTVHHGDLKESGKSETFDVLQTIPNQSNTKPVLNSINNHEKSLGNSTESVVSNFLESSIRNKTPCDVPTIENTNCNGNPAHNSALQNKIIPTLLHENEFNNDRTAMSEEICSPTQYGLQPSSNNGLHIITKEINDKTIPNNHTHEYRQDKLSEELIARNPYRGYLPESSENYSQHLQRLAQWPKPIPSLMPISNNSYQYNGQIPTAYFNKDIRLNGVIPHNQQFRDTRLSDQKDVLPEHLQNIKNIIPSITSTYQTCDMGPAAQRLMKDNKCMRSVWFQGKDKLVHMNGQRPISDAKSSVKRLSQRVPRLSPIVPPSPWAQNNRLPCVAPMVCPPRGFPYQAPSWITPHPLPHALASPTGPVHPLPNPLCTTPSHQQQTISDLTRPAMAAPAPNMASPENMDASLPAHSKTQTRPESNHVEHQDPTRKRSSESLDVFCRLKERRLQEFYKEQMTIKMKNGGNEASLKDDEVASDLSTKYSQSPRSISARSSPCDYGSPLTPSLQQKLKSLSDLTSSKLSAIEERIQYKENLKEEDFSNFPKNCDIITNNVEVKTEQVEEQQPGNEQNGGAGGGKMYSHEDDDVQILNENKPIFTKNDSNNNNGVVVDEATPAAKNHGCEDCGKCFSRRQLLVQHRRIHTGERPYSCADCGRQFTQRGHWSTHQKLHEPARRPEHACPSCGKAFVTRASLKVHLRTHTGEKPFQCGECGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCQYCGKSFNQRVAYNMHVRIHTGERPHSCPHCNKSFSRKMLLKQHLRIHTGEKPFACSVCGKAFADRSNMTLHMRLHSGIKPYSCQLCSKAFTKKHHLKTHLNYHTGTKPYSCSKCGLRFSQSSNMRTHYKKCTSTGPVNLETPVNNSETLKSPVAEGNGATSPSSSLGHSDVTVNSAAVITPPHSDESSCGSSVIPRNAIEAQPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00209934;
90% Identity: iTF_00209934;
80% Identity: iTF_00209934;