Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01001103.1:225566-283755[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0012 0.067 14.3 0.3 1 23 475 498 475 498 0.95

2 19 0.019 1.1 10.5 2.0 1 21 508 528 508 529 0.92

3 19 0.0043 0.25 12.5 0.7 3 23 540 560 538 560 0.91

4 19 0.31 18 6.7 0.1 3 23 569 590 567 590 0.89

5 19 6.3e-05 0.0036 18.3 1.0 1 23 595 617 595 617 0.98

6 19 0.023 1.3 10.2 2.5 1 23 623 645 623 645 0.93

7 19 1.3e-05 0.00073 20.5 3.8 1 23 651 673 651 673 0.99

8 19 0.0062 0.36 12.0 0.0 1 23 685 708 685 708 0.86

9 19 0.00086 0.05 14.7 4.7 1 23 727 749 727 749 0.97

10 19 0.0012 0.066 14.3 1.7 1 23 756 778 756 778 0.97

11 19 0.00017 0.01 16.9 0.9 1 23 793 816 793 816 0.95

12 19 0.00014 0.0079 17.2 1.0 1 23 823 846 823 846 0.98

13 19 0.00017 0.0096 17.0 0.6 2 23 866 888 865 888 0.96

14 19 3.7e-05 0.0021 19.0 3.0 1 23 897 919 897 919 0.98

15 19 1.8e-05 0.001 20.0 1.7 1 23 925 947 925 947 0.97

16 19 0.31 18 6.7 4.4 1 23 953 975 953 975 0.93

17 19 0.00014 0.0082 17.2 0.7 1 23 981 1003 981 1003 0.97

18 19 3.4e-05 0.002 19.1 0.2 1 23 1009 1031 1009 1031 0.96

19 19 3.3e-06 0.00019 22.3 2.4 1 23 1037 1059 1037 1059 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0012	0.067	14.3	0.3	1	23	475	498	475	498	0.95
2	19	0.019	1.1	10.5	2.0	1	21	508	528	508	529	0.92
3	19	0.0043	0.25	12.5	0.7	3	23	540	560	538	560	0.91
4	19	0.31	18	6.7	0.1	3	23	569	590	567	590	0.89
5	19	6.3e-05	0.0036	18.3	1.0	1	23	595	617	595	617	0.98
6	19	0.023	1.3	10.2	2.5	1	23	623	645	623	645	0.93
7	19	1.3e-05	0.00073	20.5	3.8	1	23	651	673	651	673	0.99
8	19	0.0062	0.36	12.0	0.0	1	23	685	708	685	708	0.86
9	19	0.00086	0.05	14.7	4.7	1	23	727	749	727	749	0.97
10	19	0.0012	0.066	14.3	1.7	1	23	756	778	756	778	0.97
11	19	0.00017	0.01	16.9	0.9	1	23	793	816	793	816	0.95
12	19	0.00014	0.0079	17.2	1.0	1	23	823	846	823	846	0.98
13	19	0.00017	0.0096	17.0	0.6	2	23	866	888	865	888	0.96
14	19	3.7e-05	0.0021	19.0	3.0	1	23	897	919	897	919	0.98
15	19	1.8e-05	0.001	20.0	1.7	1	23	925	947	925	947	0.97
16	19	0.31	18	6.7	4.4	1	23	953	975	953	975	0.93
17	19	0.00014	0.0082	17.2	0.7	1	23	981	1003	981	1003	0.97
18	19	3.4e-05	0.002	19.1	0.2	1	23	1009	1031	1009	1031	0.96
19	19	3.3e-06	0.00019	22.3	2.4	1	23	1037	1059	1037	1059	0.98

Sequence Information

Coding Sequence: ATGGAATGTAATCAACAACATATAAATGGAAGACCAAGTTCTCTATATGGAAATACATCTCTAAATGAAAGACATAGTGTAGAAATTCCTGAAGAGAAGAATAAATCTACCTCAAATTTGGAAAAATCTCAAAATCAAGAATTAAATGGTGTCTCCATATTACGTAATTCAGAAGAGGAGGAGAAAGAATTGTATATTGAAGATAATGAAATAAGAATAGCAAACAATATCAATCTCACGAAACCAACTACACTAAAAATGTTGAAATCTTTCAAACAGGATTTGTCAGTTAAAACAAATTGTGACATCAGTGTTAGAAGAATGAGCTCCACAAAACAGGAAATTCCAAAGCACCCAGATTCGAGTTATTTTGTGCAATTCTGTCGATTGTGTGCTTTACCTAAGGAGAACATGGTCTATATATTTAGTGAGCCGGGTCTTGAACTTGGCTTACGAAGTAAGATCAACACTTGGCTGCCAACTCATGTCAGCAGAACTGACCCTTTGCCAAAACAAGTTTGTGACCATTGCATCGAGAAACTAGATTTTTGCAATGGCTTTGGCAAATCTTGCTTAAAGGCAGAACAAAAGCTAAACAATATGTTTAATAACAAGAAATTCAGGTATCAAGTTCGCCTGCCTGAAGAGGATATTTGTAGAGATAAGAGAATGTGGAAGCAAAATTCACAATTGAAACCTATTGATAGTTTATCAAATACTGTAAACAAACAGGACAATTGTACTTCACAAACTTCATCCAGTATAATTAATCAAACACTAAAACAGTCAAATATAAGTCCTACAGAAATAGAACACTTGACTTCCGGCGATGATGACAGTTGTAATGATTTACTCTCAGATGACTCTTCTGAAAATGAGCTCATAGATATGATATTAAATGACAACGAAGAATCTGGCGATAAAATAGCAGAGGAGACAAGTTATTGCTGTCCGCTATGTTGTGAAGGCATTATGATGACTGTCAAGAAGTTACCTAAGGATTCTGTAATCATTAATGAATCAGAGAAATCACTAGTTAATGAAAAAGTTTACAAAAAGACTACATTGGAGACATTTAATTGTGTAAATATGtcatttatgaaagaaaaagatATCGTAGAGAAAAATAATATCATTGTGAATAGTGAAAACAACAgtaattcatttattttgaaCATTACAGATATAAAACAAGAAGATGTCAATAATCAAGAAACATTatattgtataccggtatataataatgaaaacaatgGTGCTAATGAGaataataactttcaaaattcTAAATTGTTGAATGACATAATTAAATCTGAAAATGATAATGCAGTAAAATGTGTTATATGTTTTGAGACTATGTCAAATTTAAATGAATGTTTAATTCATGCTCTGACAGTTCATGCAGATGCAGCTCGTTGTTCTTTTCCATGTAGTCGATGTGATAAGATCTTCTCAGTTGACACGGATCTCAACAGACATTTTATGATATTACATCAGAATATAAAGTCTGCAAGATTACTTCATATCTGCACAAATTGCGGCCGTCGATGTGCTTCACAGCGTGCATTAGAATCTCATGTCTGCATTCCTGTGAACTCAGTACCTGATCAACTAGCTTGTAGTATATGTGGTCGATCTTTTAGCACTAAAGCTCGTCTTGTTTTCCATTATCGTTTTCATGAACCTGGAAATCATTCATTAGAATGTGTTCCATGTTCAATGGTTTTTGCTGAAGAGGATAATTTGTTTGATCATATTAGATTTTCACATCGAGGAGAGTCTTTTATTTGCGATAAATGTGGTCAACATTTCAATAGTAAAGCCGCTTTGCGTGGACATGTTCGCTCACATTGCAATTTGAGGCATCATAAGTGTGAAGTATGCAATAAAACTTTCCTAGATAAACAGACTCTGAAGGAGCATTCAGTTTCTCATATGGAGATTAAACCATACCAGTGCCATATCTGTGGGAAGTACCTCAATCGTAATTCAAGACTGAAAAAACATATGATGTCTCATGAACTGCAGAAAAAGTCCAAACCTCAAGAATGTTATCAGTGCACAGTATGTGGAGAAACATTTCCAAATAAACCAAAGGCAGTAGTTCATGCTCAGGCAGGACATTCACTTCCAAATGAGGTGGAGTGTGTCTTCCATTTAGTGTCCTTGGATAAGGTTTACCGATGTGAATTCTGTGAGAGATGCTTTGACCAGCCAACACACCTCAATTCACATCGAGCAAATCATATCGATGAGACTCTTCCTTTTAAATGTCATGTGTGTGGGACTGGATTTTCAACTTTTGCTCGCTTAGCTACTCATAAGGTGACGCAtggtgtttataaaaaaaatgatgaaTTCAGCATTCCCAAATTGTTCCTCTGCAATGAGTGTGACAAGGCTTATGTGCATTGGACTTACCTCTCTGTTCATCGCAAGATGATACATGCCGAAGTGAAACACATGTATAAATGCAAGATGTGTCCAGAACAATTTGTTAATTCCTGGAGTCTTGCTTATCATAGAAAAACACGCCACTCAGAATCAGCTTCTTTTCTAAATACTGAATTGCCTATTACTGAACGAAAACGGTGGAGGTGTGAATATTGTGAGAAACGTTACGTGAGCCAACAGTCATTATTAACACACATCAACATGTTTCATGCAGGTGAAAAATCTGGTCCTAACTTCCAATGTGATGAATGTGGAAAGTGTTTTGCTCGAAAAATATCACTAGATACTCATAAAAAGAATCACAATGGACCTAGGAGTCATGTTTGTCCTATCTGTAAGAAAGGTTTCGTACATAATTCTGGACTCTCATCTCATCTTCGTTTACATCGTGGTGATAAGCCTCACTGTTGTGAATATTGCGGAAAAACATTTCTGCAGAGAGGAGATAAGGATGACCATGTTCGCAAACATACAGGAGAAAGACCATTTGCCTGTCAGCAATGTCCCAAAACTTTCCGAACTAGAGCCATGTGGTTTGAACACACCAGAATACATCGTGATGAACGTCCATTCCCTTGTGATGTTTGTGGAGCTGCATTTCGTCGATCATAtgcattaaaaaatcacaaaaccatACATACAGGTGAACGTCcacataaatgtaatatttgtggCAAAGCATTTAGACAAAAACAGGATATGCTGAAACACTTGAAAGTTCATCTACTACAGGAACAAGAGGAGAATGACGAAGACTTGGCTGTTGTGCTTCCTTCTAGTTAG
Protein Sequence: MECNQQHINGRPSSLYGNTSLNERHSVEIPEEKNKSTSNLEKSQNQELNGVSILRNSEEEEKELYIEDNEIRIANNINLTKPTTLKMLKSFKQDLSVKTNCDISVRRMSSTKQEIPKHPDSSYFVQFCRLCALPKENMVYIFSEPGLELGLRSKINTWLPTHVSRTDPLPKQVCDHCIEKLDFCNGFGKSCLKAEQKLNNMFNNKKFRYQVRLPEEDICRDKRMWKQNSQLKPIDSLSNTVNKQDNCTSQTSSSIINQTLKQSNISPTEIEHLTSGDDDSCNDLLSDDSSENELIDMILNDNEESGDKIAEETSYCCPLCCEGIMMTVKKLPKDSVIINESEKSLVNEKVYKKTTLETFNCVNMSFMKEKDIVEKNNIIVNSENNSNSFILNITDIKQEDVNNQETLYCIPVYNNENNGANENNNFQNSKLLNDIIKSENDNAVKCVICFETMSNLNECLIHALTVHADAARCSFPCSRCDKIFSVDTDLNRHFMILHQNIKSARLLHICTNCGRRCASQRALESHVCIPVNSVPDQLACSICGRSFSTKARLVFHYRFHEPGNHSLECVPCSMVFAEEDNLFDHIRFSHRGESFICDKCGQHFNSKAALRGHVRSHCNLRHHKCEVCNKTFLDKQTLKEHSVSHMEIKPYQCHICGKYLNRNSRLKKHMMSHELQKKSKPQECYQCTVCGETFPNKPKAVVHAQAGHSLPNEVECVFHLVSLDKVYRCEFCERCFDQPTHLNSHRANHIDETLPFKCHVCGTGFSTFARLATHKVTHGVYKKNDEFSIPKLFLCNECDKAYVHWTYLSVHRKMIHAEVKHMYKCKMCPEQFVNSWSLAYHRKTRHSESASFLNTELPITERKRWRCEYCEKRYVSQQSLLTHINMFHAGEKSGPNFQCDECGKCFARKISLDTHKKNHNGPRSHVCPICKKGFVHNSGLSSHLRLHRGDKPHCCEYCGKTFLQRGDKDDHVRKHTGERPFACQQCPKTFRTRAMWFEHTRIHRDERPFPCDVCGAAFRRSYALKNHKTIHTGERPHKCNICGKAFRQKQDMLKHLKVHLLQEQEENDEDLAVVLPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -