Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01001031.1:51238-76334[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.075 4.3 8.6 0.3 6 23 453 470 452 470 0.99

2 23 0.0038 0.22 12.7 5.2 1 23 475 497 475 497 0.97

3 23 0.03 1.8 9.8 2.6 2 20 504 522 503 524 0.94

4 23 0.0093 0.53 11.5 2.3 1 23 565 587 565 587 0.98

5 23 0.00032 0.018 16.1 1.0 1 23 590 612 590 612 0.99

6 23 0.0034 0.19 12.9 1.6 3 23 622 642 620 642 0.97

7 23 0.069 4 8.7 3.8 1 23 732 754 732 754 0.97

8 23 0.045 2.6 9.3 1.4 1 23 760 783 760 783 0.96

9 23 0.0019 0.11 13.7 1.0 1 23 855 878 855 878 0.97

10 23 2.3e-05 0.0013 19.6 1.4 1 23 884 906 884 906 0.98

11 23 0.0014 0.08 14.1 0.7 1 23 913 935 913 935 0.95

12 23 0.00023 0.013 16.5 1.6 1 23 941 963 941 963 0.98

13 23 5.5e-05 0.0032 18.5 3.5 1 23 969 991 969 991 0.98

14 23 0.0014 0.078 14.1 2.0 1 23 997 1020 997 1020 0.98

15 23 0.00052 0.03 15.4 0.1 1 23 1048 1070 1048 1070 0.97

16 23 0.0004 0.023 15.7 0.5 1 23 1105 1127 1105 1127 0.93

17 23 0.00051 0.029 15.4 0.5 1 21 1146 1166 1146 1167 0.95

18 23 0.0026 0.15 13.2 0.3 1 23 1237 1259 1237 1259 0.92

19 23 0.00012 0.0069 17.4 0.8 2 23 1356 1377 1356 1377 0.96

20 23 0.0071 0.41 11.8 1.3 2 23 1419 1440 1418 1440 0.96

21 23 0.001 0.06 14.4 1.0 1 23 1446 1468 1446 1468 0.98

22 23 0.0017 0.099 13.8 1.1 1 23 1474 1497 1474 1497 0.96

23 23 0.00097 0.056 14.6 2.0 1 23 1503 1525 1503 1525 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.075	4.3	8.6	0.3	6	23	453	470	452	470	0.99
2	23	0.0038	0.22	12.7	5.2	1	23	475	497	475	497	0.97
3	23	0.03	1.8	9.8	2.6	2	20	504	522	503	524	0.94
4	23	0.0093	0.53	11.5	2.3	1	23	565	587	565	587	0.98
5	23	0.00032	0.018	16.1	1.0	1	23	590	612	590	612	0.99
6	23	0.0034	0.19	12.9	1.6	3	23	622	642	620	642	0.97
7	23	0.069	4	8.7	3.8	1	23	732	754	732	754	0.97
8	23	0.045	2.6	9.3	1.4	1	23	760	783	760	783	0.96
9	23	0.0019	0.11	13.7	1.0	1	23	855	878	855	878	0.97
10	23	2.3e-05	0.0013	19.6	1.4	1	23	884	906	884	906	0.98
11	23	0.0014	0.08	14.1	0.7	1	23	913	935	913	935	0.95
12	23	0.00023	0.013	16.5	1.6	1	23	941	963	941	963	0.98
13	23	5.5e-05	0.0032	18.5	3.5	1	23	969	991	969	991	0.98
14	23	0.0014	0.078	14.1	2.0	1	23	997	1020	997	1020	0.98
15	23	0.00052	0.03	15.4	0.1	1	23	1048	1070	1048	1070	0.97
16	23	0.0004	0.023	15.7	0.5	1	23	1105	1127	1105	1127	0.93
17	23	0.00051	0.029	15.4	0.5	1	21	1146	1166	1146	1167	0.95
18	23	0.0026	0.15	13.2	0.3	1	23	1237	1259	1237	1259	0.92
19	23	0.00012	0.0069	17.4	0.8	2	23	1356	1377	1356	1377	0.96
20	23	0.0071	0.41	11.8	1.3	2	23	1419	1440	1418	1440	0.96
21	23	0.001	0.06	14.4	1.0	1	23	1446	1468	1446	1468	0.98
22	23	0.0017	0.099	13.8	1.1	1	23	1474	1497	1474	1497	0.96
23	23	0.00097	0.056	14.6	2.0	1	23	1503	1525	1503	1525	0.97

Sequence Information

Coding Sequence: ATGACGAATGTAATAGTTGTAAATAACGATATTCCGTCTGTAATAAATGAATTATGTCGCTTGTGTTTATCAAAAGACAGCGGCATTTTGCCAATTTTTGCCGACGAAGAAAGTGGTAATAGTAGCGTACCTCTCTCATTTAGGATATTGGCTTGCGTATCAATAGAGGTTTCTCTAAATGATGGTCTTCCCAAATATATATGTCGGAATTGTCTTACTCAAGTAAATACATGGCACACCTTCAAGCAGGTGTGTGATTCATCCCAAATAACCTTAAAAGAATGGCTCAACAAATTGGAACAGGACCTTTCAGTTCAAGATAAGACTATATCCGTGAAGCAGGAGCCACCTGACGAAGATGACATGATAGAAATCCATCACGTTGTCGAGTCAGAAGCGATTTTGGATGATTTGAATCATGAAATCAATTCAAGAGGAGAAATAGAACATCACAACCTCAGGGCAGAACAAAATTCTGATTTGGATTCTAGGCGAGATTCTGGACTCCTTCCTGACGACATGGGCCATAGTGAAAATTTGAATCTGGGCGATGATTTGGACTCGAGGCAGGACTCCAGTATCCATCTCGAAATAGAATCACAGGGAAATGCAGCGGAGATTCATGCTAGAGGCACTGCAGAATTGCAGCACGAGTCTCCAATTGGGGTCAGTTCTGAGATGGCTCACGATGTAGAAATGGACACGGGTTTAGAGATTGATCATGAGGCCATCAGCAGGAGTAGCAACATACATCACAGCTTGGAATCACACCACAACGCGGACAGCACTCAGGAAATTGAAATGAATGATGACGTTGTGGAAGGGTTTGTTGGTATTAGACGCAGCGGAGATGTCCAACATGACGTCGACTCCAGGGGAAACATTGATCTTTTCGAAATAAAGCAAGAGGAAATTGAAGTTTGTGAAGTAattgaggaggaggaagaagaagacgaggaaaTTTTTAATGATGTTGTCGATGACCCTTTGAGCATATCGTTAATGGATACAGAAAGACCGTTGCCCTTTAAAAGTATCAAGATTGAACCAATAGATAACGAGTCGTTCGGAGAACAGTATTGTGTAGACGATTACAAAAGAAAAGATGGAATGTGTTTTGATGCAGTGAATAGAATTTATAGTAATCTAAAAGTAGTGAAAACAGAACCTGGCGTTACAAAGAAGAAACCTAAAAAGAAAAGACCTCTGACCCTTAGAAAGAAAAGACCATCAGTGCAGCTGGATCATAGGCCTTCTACTGTTGCCCATGTTGAACATACCGTGGTGTCAGGTTCTAaacaaaagtatttttgttttcctGGTGCCAACGGAAAAGAACACTATTTTTGTATTCCCTGTGGCAAAACATTTAAATGGAAGTCTTATTACCTAAGGCATGAGAAAACGCATCGTAAGACAAACCATGTATGTAGTTATTGTGATAGAAATTTCTCATGTAAGTCAAATTTAGACAGACATGTTCGGTTGCATACCGGTCTTCAGCCATTGACCTGCCCACATTGTTCTCTACATTTCGAAAGCAAGTCAGAGTACATGAAGCATAAATTCCAGTGCATGCCTCACACTGCCAAAGTCGAGCCTCCCAAACCAGAACCTCCGAAACCACCGGAACCTCCAAGGTCGGAATCACTCGACGTACCAGAGTCGAGAGATCCTCATTTAGGAAATTcgtttccatgttacatttgtcgGGAGTCGTTCGATAGCATTCACAAACTACAGTTGCATCGAAGAAATCACGAAGATTTTCGGTGTCGTAAATGTAATAAATCGTTCTCAGGTGGAATTGCTCTTAGCAATCATTTAAGAACTCACAACTTTGATGGTTTTAAAAGATATGGCTGTAAAATCTGCAAGAAAAACTTCAGTAATGTTACTTCACTGGTCAGCCATAAAAGATTCCACACCATCAAAGAAAATGCTGCTTTGGGGAAAGTAGGAAGTAGATCTGCAGCTGCAAAACGGTCAATGTTTTCCGGTTCAAAACCGGAAAATGCGACAGTCAAGGAAAGATCGAACACTCCTATTCCAAAAGCACCGTTGAGGAATAATGCAATGATGTCGAAGCCGCCTTCAAAAATTCCACAGAGAATGGTGAAACAGAACACGTTGGTGCCAAAACCACAGATCAGACTTTTAAATATTAGTCAAGCGGCTGTTCCTGGTCGAGGATATTGTTGTACAGTCTGCAAAAAGTGGGTCAAGACCAGATCTGTCTTAAAGAGACACATGACAAGTCATACAAAACTTAAattgttttcatgttttatttgcaAATTATCCATGGGCTATGCCTCGTCTTTGCACAAACACATGAGGCTCGCCCATGATGTAGAGATGAGTTACAGCGAAATACATGCGATGGCTAATGTTCCAGCTTTAGAAGAACAAGAAGCATTTATGAAGGGACGGACAAATCAAACTTCGGCGAAGAGTAAGAACACGGACAAAGGGCCGCAAAGAGTAGCGATGCAGGATCATAAAGAAACATTTCAGGAAGAAGGTGCCTTGGAAGGTTCTCAGGCACTTTCCAAACAAGGATTTACTTGTAACACTTGCTTCAAGGTATTCTCAAATAAGAGGATACTTGAAAATCATGTCAAAATCATCCACATGGGCGGGAGAGCTTATAAATGCAATACTTGTTCCAAGATGTTTGCTCAAAAGAGTATGTTAGTGAAGCATGCGAAACTGCATGCCGTCGAAACCCAGGGATTTACATGTACAGTGTGTTTGAAGACATTTGCCGACTTGAAGACCTTGAATAACCATAAAGGCGTTCACACGAGATTTAAATGTTACACTTGCAACACGTGTTCGAAAACCTTCAATGGACTAAAAAATTGGGAACAACATCAGAGGTTGCATGCTTCTAGCATTCGATTTAAATGCAGAATGTGTGGGAAAACATTCTTCTCGAAATCGGAATTATATGAACACAAAAAAATGCACATCAAACTCAAAATATACACATGTGGAGAATGTAAAAATTCTTACAACAGTATGTCTGCATTGAACAGACATAAGCGTAAGAAACACGACAATACAAATCCTGAAATTGACTCGTTTTTGGGAGAATcggctgatgaaaatgaaatgatGGATGAAGAGGAGAGGTTATACGTTTGCGGAGTTTGTGACAGGACGTTCCCTGATACAATTTCATTGAGTAAGCATAAGTTGATCCACATAAAGAGAGATTTCAGCAAGATCCATGCTCCAGTGGTATTAGATCCTCCAGCAACTAAATCAGTTTCCAGCATGTCAAACCCAACAAACGCAGGAGGGAAATATGAGTGCTTGATATGTAAAAGAAATTTCCCCGACCAGAGTTCCCTAAGTAAACACAAAGGCTGGCATTCGAGAACAACTGTAGAGGCAGAAACCAGTTCTCCATGGAAAGGCAAGAaagtgtatgtgtgtggattTTGTAAACGATCGTTTGCTAATAGTGGATCTCTTTCAAAGCATAGGAAATTAAATTGCCCTCCTAAaagaaatttcaacaaaaatctaATTCCTTCTGCATTTGTGCAGAGCAAGCCCATGCTACAGTCAGTCAAACCAGTTAACATGGCAAGCATGATCCCACCAACAATGAATTCCGTTAAACCTCCCATTAAACCTCCCATTAAACCTAAACCCTCTCCAGCCCAGAATGTTGCCAGAACTGAAAGATCGAGACATTTTCCATGTCTTTTGTGCGAAAGAGTTTTTAACAACAAGAAAGCTTTAGTTCGTCACAAAGGTTGGCATACAAGATGTCCTACACTTGGAAAGGATTCACCATCGAAAAATGTTACTACCCAGGAAGCTTCGTCAGATGCATCGAGAACTATGGATGAACAGAAGACCTCAGCTGTACCCAATGCCTTGGCTGAAAATCCACGAGTAGAAAATGATGCAGAAGTGGTGGTTGCTGATGAAGAAGTTGAGGTGGATGTTGAAGAAGTTCAAGAGGACCCGATTCCACCACCGCAACAGCAGCCCCTCCAAGAAGTGCCGGCACCTAAGTCACAACCACGAAAGAACCCCAAGAGCCGTTCATGTGACGTTTGCTTTAAAGTTTATAGTTCGTCATCATCGCTGGCCAGACATAAGAGACTTCATACAagaaaattacttacaaatttgaAGAGCATCAGAAAATTGCAGGTACTGCCGGCACCTATCATTGTACAACCCACTGAGGAGGTAAATGCTGCAAGTGTTCCAGAAGGCGACGATATACTTAGTTGTCGATACTGCAAAAAAGTGTTCAAATTCAGAAGGCAAGTGGTAGAACATGAACGTGTCCATACTGGGGAACGTCCATTTTCATGCAATCAGTGTTCACTAACATTTTCAAGACGGGCCATTTTATGGAGACATCAGAAGATTCACTCGGGCATTAGGCCATTTGCTTGTACCCTGTGTCCCAAAGCGTTCCTTTTTAACTTTCAACTCACACGCCACATGAGAGAAAAACATATGAATAGGGACATTTACAACTGTCGTCAGTGTAACAAATCATACCGTACCTCGCTGGCGTTGAAGAAACATGAACTATCacatcaaaagtaa
Protein Sequence: MTNVIVVNNDIPSVINELCRLCLSKDSGILPIFADEESGNSSVPLSFRILACVSIEVSLNDGLPKYICRNCLTQVNTWHTFKQVCDSSQITLKEWLNKLEQDLSVQDKTISVKQEPPDEDDMIEIHHVVESEAILDDLNHEINSRGEIEHHNLRAEQNSDLDSRRDSGLLPDDMGHSENLNLGDDLDSRQDSSIHLEIESQGNAAEIHARGTAELQHESPIGVSSEMAHDVEMDTGLEIDHEAISRSSNIHHSLESHHNADSTQEIEMNDDVVEGFVGIRRSGDVQHDVDSRGNIDLFEIKQEEIEVCEVIEEEEEEDEEIFNDVVDDPLSISLMDTERPLPFKSIKIEPIDNESFGEQYCVDDYKRKDGMCFDAVNRIYSNLKVVKTEPGVTKKKPKKKRPLTLRKKRPSVQLDHRPSTVAHVEHTVVSGSKQKYFCFPGANGKEHYFCIPCGKTFKWKSYYLRHEKTHRKTNHVCSYCDRNFSCKSNLDRHVRLHTGLQPLTCPHCSLHFESKSEYMKHKFQCMPHTAKVEPPKPEPPKPPEPPRSESLDVPESRDPHLGNSFPCYICRESFDSIHKLQLHRRNHEDFRCRKCNKSFSGGIALSNHLRTHNFDGFKRYGCKICKKNFSNVTSLVSHKRFHTIKENAALGKVGSRSAAAKRSMFSGSKPENATVKERSNTPIPKAPLRNNAMMSKPPSKIPQRMVKQNTLVPKPQIRLLNISQAAVPGRGYCCTVCKKWVKTRSVLKRHMTSHTKLKLFSCFICKLSMGYASSLHKHMRLAHDVEMSYSEIHAMANVPALEEQEAFMKGRTNQTSAKSKNTDKGPQRVAMQDHKETFQEEGALEGSQALSKQGFTCNTCFKVFSNKRILENHVKIIHMGGRAYKCNTCSKMFAQKSMLVKHAKLHAVETQGFTCTVCLKTFADLKTLNNHKGVHTRFKCYTCNTCSKTFNGLKNWEQHQRLHASSIRFKCRMCGKTFFSKSELYEHKKMHIKLKIYTCGECKNSYNSMSALNRHKRKKHDNTNPEIDSFLGESADENEMMDEEERLYVCGVCDRTFPDTISLSKHKLIHIKRDFSKIHAPVVLDPPATKSVSSMSNPTNAGGKYECLICKRNFPDQSSLSKHKGWHSRTTVEAETSSPWKGKKVYVCGFCKRSFANSGSLSKHRKLNCPPKRNFNKNLIPSAFVQSKPMLQSVKPVNMASMIPPTMNSVKPPIKPPIKPKPSPAQNVARTERSRHFPCLLCERVFNNKKALVRHKGWHTRCPTLGKDSPSKNVTTQEASSDASRTMDEQKTSAVPNALAENPRVENDAEVVVADEEVEVDVEEVQEDPIPPPQQQPLQEVPAPKSQPRKNPKSRSCDVCFKVYSSSSSLARHKRLHTRKLLTNLKSIRKLQVLPAPIIVQPTEEVNAASVPEGDDILSCRYCKKVFKFRRQVVEHERVHTGERPFSCNQCSLTFSRRAILWRHQKIHSGIRPFACTLCPKAFLFNFQLTRHMREKHMNRDIYNCRQCNKSYRTSLALKKHELSHQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -