Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01000344.1:292776-314224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.008 0.46 11.7 6.9 1 23 82 104 82 104 0.93

2 27 1.2e-05 0.00068 20.6 1.8 1 23 109 131 109 131 0.96

3 27 5.8e-05 0.0033 18.4 2.0 1 23 170 192 170 192 0.96

4 27 1.1e-05 0.00065 20.6 0.5 1 23 198 220 198 220 0.98

5 27 8.6e-05 0.0049 17.9 0.6 1 23 226 248 226 248 0.97

6 27 0.00049 0.028 15.5 0.7 1 23 254 276 254 276 0.97

7 27 0.00054 0.031 15.3 0.3 1 23 282 304 282 304 0.98

8 27 8.5e-05 0.0049 17.9 2.5 1 23 310 332 310 332 0.95

9 27 2.4e-06 0.00014 22.7 5.7 1 23 357 379 357 379 0.98

10 27 0.00034 0.019 16.0 0.9 1 23 385 407 385 407 0.98

11 27 0.00016 0.009 17.0 0.2 1 23 413 435 413 435 0.98

12 27 6.1e-05 0.0035 18.3 0.5 1 23 441 463 441 463 0.98

13 27 7.4e-05 0.0043 18.1 0.8 1 23 469 491 469 491 0.95

14 27 8.8e-06 0.00051 21.0 3.4 1 23 497 519 497 519 0.98

15 27 2.4e-06 0.00014 22.7 4.4 1 23 829 851 829 851 0.98

16 27 3.8e-06 0.00022 22.1 0.7 1 23 857 879 857 879 0.98

17 27 1.9e-07 1.1e-05 26.2 1.9 1 23 917 939 917 939 0.99

18 27 1.3e-06 7.4e-05 23.6 1.4 1 23 945 967 945 967 0.98

19 27 4.5e-07 2.6e-05 25.0 0.9 1 23 973 995 973 995 0.98

20 27 0.0034 0.19 12.8 1.6 1 23 1001 1023 1001 1023 0.98

21 27 4.3e-07 2.5e-05 25.1 1.2 1 23 1029 1051 1029 1051 0.98

22 27 2.3e-05 0.0014 19.6 1.5 1 23 1057 1079 1057 1079 0.95

23 27 0.01 0.58 11.3 7.4 1 23 1102 1124 1102 1124 0.98

24 27 4.8e-06 0.00028 21.8 0.7 1 23 1130 1152 1130 1152 0.98

25 27 5.3e-05 0.0031 18.5 2.3 1 23 1158 1180 1158 1180 0.98

26 27 0.00013 0.0075 17.3 0.4 1 23 1186 1208 1186 1208 0.97

27 27 0.0054 0.31 12.2 3.9 1 23 1214 1236 1214 1236 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.008	0.46	11.7	6.9	1	23	82	104	82	104	0.93
2	27	1.2e-05	0.00068	20.6	1.8	1	23	109	131	109	131	0.96
3	27	5.8e-05	0.0033	18.4	2.0	1	23	170	192	170	192	0.96
4	27	1.1e-05	0.00065	20.6	0.5	1	23	198	220	198	220	0.98
5	27	8.6e-05	0.0049	17.9	0.6	1	23	226	248	226	248	0.97
6	27	0.00049	0.028	15.5	0.7	1	23	254	276	254	276	0.97
7	27	0.00054	0.031	15.3	0.3	1	23	282	304	282	304	0.98
8	27	8.5e-05	0.0049	17.9	2.5	1	23	310	332	310	332	0.95
9	27	2.4e-06	0.00014	22.7	5.7	1	23	357	379	357	379	0.98
10	27	0.00034	0.019	16.0	0.9	1	23	385	407	385	407	0.98
11	27	0.00016	0.009	17.0	0.2	1	23	413	435	413	435	0.98
12	27	6.1e-05	0.0035	18.3	0.5	1	23	441	463	441	463	0.98
13	27	7.4e-05	0.0043	18.1	0.8	1	23	469	491	469	491	0.95
14	27	8.8e-06	0.00051	21.0	3.4	1	23	497	519	497	519	0.98
15	27	2.4e-06	0.00014	22.7	4.4	1	23	829	851	829	851	0.98
16	27	3.8e-06	0.00022	22.1	0.7	1	23	857	879	857	879	0.98
17	27	1.9e-07	1.1e-05	26.2	1.9	1	23	917	939	917	939	0.99
18	27	1.3e-06	7.4e-05	23.6	1.4	1	23	945	967	945	967	0.98
19	27	4.5e-07	2.6e-05	25.0	0.9	1	23	973	995	973	995	0.98
20	27	0.0034	0.19	12.8	1.6	1	23	1001	1023	1001	1023	0.98
21	27	4.3e-07	2.5e-05	25.1	1.2	1	23	1029	1051	1029	1051	0.98
22	27	2.3e-05	0.0014	19.6	1.5	1	23	1057	1079	1057	1079	0.95
23	27	0.01	0.58	11.3	7.4	1	23	1102	1124	1102	1124	0.98
24	27	4.8e-06	0.00028	21.8	0.7	1	23	1130	1152	1130	1152	0.98
25	27	5.3e-05	0.0031	18.5	2.3	1	23	1158	1180	1158	1180	0.98
26	27	0.00013	0.0075	17.3	0.4	1	23	1186	1208	1186	1208	0.97
27	27	0.0054	0.31	12.2	3.9	1	23	1214	1236	1214	1236	0.94

Sequence Information

Coding Sequence: ATGGAAGAGACTAAAGATGTTGAGCAAATTCACACAATTGAAGCCAATATTTATTCTGATGAAttgaaggaagaaagaaaagaatCTTTTTGTAATTTAAGTCCTGAAGTTCCTCAAGGGAATGACTTACCTGTTagctgcaaaattaaaaaaaggaatacaaagaTGATTATGAGGAAATCTAATAGAGGATGTGatgttaaaataaagaaaacagaaTTAAAAGAGGCAGATGATGGGAAATTTTCATGTCATATATGTAGGAAGATATTTAAACAGAAGCATGAACTCAACATTCATTGCCAAATTCATAATCAAAAGTTATATACTTGTGATATTTGTGACAAATCTTTCTCTACAAAAAGCAAATTTGAACTTCATTTTCAAGGACATAAAATAGGTGATATTTGTCAAAGTAATAACCAGAAAAACCGTAACTCTAATGATGATGTTCCTGTTTTAAAGTCAAAAAGTAAATCACGTAAATCGAATGCAAATGTTGTGAAGTACTTATGTTATTTTTGCAAGAAAAAGTTCAAGCTTCCCAGTCAACTAGAAAGACATCTAAGAATTCATACGGGTGAACGTCCTTTCATATGTGATATATGTAACAAATCTTTTATCGAAAAAAGTAAGTTATCTCTTCATCTTCGTGTTCACACAGGAGATCGTCCATATCCTTGTACTGTTTGCAATAAATCTTTTATGGGAAGAAGTGGCCTCAAACGACATTTTCTTATTCATACGGGCGATAGACCGTATGCATGCAGTGTATGTAATAAGACATTTACACAAAAAGTTACTAGAGATGAACATTTGCGGATCCATACAGGTGATCGTCCCTTTTCTTGTGACATTTGTCAGAAAGCTTTTGCTCAAAGAGCTAATCGTGATGAACACCGTCGGATTCATACTGGTGAAAGACCATTTCTTTGTGAATTATGTGGGAAATCATTTACGCAAAAAGCATGCTATGAGAAACATCTTCAATTACACACGCGCAAACATCCTCCTGGAAAATCCGATCTGAAAGATGGAGAAGTACGACCTCCTAGGCCACCTGGAAAATTTGTTTGTGATGTGTGTAAGAAAACTTTCAGAAATCAGTGCCATTTGAACAGACATATTAGAATTCATACTGGCGAACGACCATTTGTTTGTGATGTTTGTAACAGTTCATTCAATGAGAAAGGAAGTCTAACAGTGCATCATCGAATTCACACCGGAGATCGACCGTACCCATGTAATGTTTGTTATAAATCATTTATAGCTAAAGGCATGCTTGATCGCCATTTGCGTATTCATACAGGTGACCGGCCTTTTGTCTGTGACATTTGTAATAAAGCATTTACTCAGAAAGCAAATAGAGATGAACATAGACGTATTCATACTGGAGAACGGCCGTTTTTATGTGCAATGTGTGGTAAATCATTTTCTCAAAGAGCCTATTATGATAAACATCTCCGATTACATGTTGGCGATCATCCATTTAGCTGCCACTTGTGTAATAAATCATTTACTGTGAGAAGTAAACTTAACAGGCATCTTCTTGTTCACATCAATGAACAACGTAATAGAAATTCTGTTGCTGAGGCTCCACAGGATTCTAAAGAAAATGCCAAATTACAGTCTGTATCCTCTGACCAACAAACTGATATCAAACAAGTAGTGAACTCTACATTAGCGAAAGAACTGGGCAGTGAGCCACAAttACAGGATACCATGGGCAGTACTCAAATAGAGAATTGCTTTAAACAGCTGAACACAAACACCTATGAACCACAACTTACTATGATGAATGAAGAAAGCCATTCTCTTTCTAATGTCAATGAGCCACAAGCTGACGATTCTATGAAAATGTCAGAAGTTCAAATGAGTTTAAAGCCGCTGTCTTCGTGTGTAGTTGAGGAGGAACTGAGCAAGAGACATGCTGAGGATGCACCGGTTCTTACTGAATTGGCTAGTGTTCAAAAaACATTGACCTTAGTAGAACCTCCTGCAGCACAAACTGATTTGAAACTATATAGCACAGCTGTTTATGAAGATTTTGAAAAGGCTCATGACTCAGATTGTTCTTCGTTGTCGGATACTAATTGTGCTTCCCATGATTTTGCAGAGGAAACAACAAAAGTGCCAAATGACTTTACTCTTCTAACATCATGTATTACTGAGAACTTGAACAAGCAAGATGATGGAAGTTCCATGCTCCCAGAAGTATCCAGTGGGACTTTGgATTTTAAAGAAGACGGTGAGGAGAAATCTGTTGCATATTTAAGCAAAACATGTTATGCTTCCAAAGATGAAGAAATAAACACTGAAAATTTAAGAAGGCCACAAAAAACAGTTGATACACCTCCAAATGACAGTCAAACTTCTGATATGAAAGAAAAGGAAGAAATGAAGAAGATGGAAGTGATGGAACCTTTAGAGCTTGATGAAAATTCTGTAACGGATGGCCatgaaaaaacaaatgaaactgcAACATTTTCTTGTCATTCTTGTAATAAGACATTTAGTCGAAGAAGTAACCTTAGTAGACATTTACTAGTTCATATAGGTACACAACCATTCGTATGTGAGATTTGCAAGAAATCATTCAATGTGAAAAGCAAGCTTATAGTGCATCGTCGTATACATAATTCTGATGAGAATTCTTTAGATGCAAAGGTGGATGAAGTTGAAGAACCAAAGGATAGTGATTTACCAgttgatattaaatttaaaacagatgTAGACcagtcatttaaatttaaatgttatgtaTGTAGCAAACCATTCAAACGTTCAAGTCAACTTAATAGACATATTAGAGTTCATACAGGCGAAAAACCATTTATATGTGATACTTGTAACAAATCTTTCTCTCAAAGGAAAGGACTTACTGTTCATCTGCGCACTCATACTGGTGAAAGGCCATATCCATGCAATGTGTGTAAGAAATCATTTATGGATAACAGTTTGTTAAAAAGACATCTTCGAATACACACGGGTGATAAACCATTTTCGTgtgatatttgttttaaaaaattcacTCAGAAAGTAACTCGTGATGAACATTTACGTGTTCATACAGGTGATCGTCCTTTTCCATGTGACATATGTAAAAAATCATTCAAACAAAAGAGTACTCTTGAAGAACATAGACGTATTCACACTGGAGACAGACCATTTTTATGTGACACTTGTGGCAAATCATTTTCTCAGAGAGCATATTATGACAAACATTTGCGTAGCCATGTCAGTGATGATATGCCAGGTGATAAGTCTCGAATCACAAATCCAAAACCCAAGCCACCTGCGAAGTTTCCCTGTTGTGTTTGTTTGAAAGCATTCAGAAATAGATGTCACCTAGAAAGGCATTTTCGAATTCACACAGGCGAGAGGCCATTCGTTTGTAGTACATGCAATAAGTCTTTCAACGAGAAAGGAAGCCTTACAGTTCATCTCCGTATACATACAGGAGACAGGTCATATCATTGTGATTATTGCTATAAATCATTTATTACAAAAGGCATGTTAGACAGGCATGTGCGAATCCATACAGGCGATAGACCTTTTGcatgtgaaatatgtaataaagcattCACACAAAAAGCTAATCGGGATGAACACAGACGAATACATACTGGAGAACGTCCTTTCCTTTGTGAAATATGTGGGGAATCATTTACTCAGAAAACTTGTTATGATAAACATTTACATTGGCATACTGCTTAG
Protein Sequence: MEETKDVEQIHTIEANIYSDELKEERKESFCNLSPEVPQGNDLPVSCKIKKRNTKMIMRKSNRGCDVKIKKTELKEADDGKFSCHICRKIFKQKHELNIHCQIHNQKLYTCDICDKSFSTKSKFELHFQGHKIGDICQSNNQKNRNSNDDVPVLKSKSKSRKSNANVVKYLCYFCKKKFKLPSQLERHLRIHTGERPFICDICNKSFIEKSKLSLHLRVHTGDRPYPCTVCNKSFMGRSGLKRHFLIHTGDRPYACSVCNKTFTQKVTRDEHLRIHTGDRPFSCDICQKAFAQRANRDEHRRIHTGERPFLCELCGKSFTQKACYEKHLQLHTRKHPPGKSDLKDGEVRPPRPPGKFVCDVCKKTFRNQCHLNRHIRIHTGERPFVCDVCNSSFNEKGSLTVHHRIHTGDRPYPCNVCYKSFIAKGMLDRHLRIHTGDRPFVCDICNKAFTQKANRDEHRRIHTGERPFLCAMCGKSFSQRAYYDKHLRLHVGDHPFSCHLCNKSFTVRSKLNRHLLVHINEQRNRNSVAEAPQDSKENAKLQSVSSDQQTDIKQVVNSTLAKELGSEPQLQDTMGSTQIENCFKQLNTNTYEPQLTMMNEESHSLSNVNEPQADDSMKMSEVQMSLKPLSSCVVEEELSKRHAEDAPVLTELASVQKTLTLVEPPAAQTDLKLYSTAVYEDFEKAHDSDCSSLSDTNCASHDFAEETTKVPNDFTLLTSCITENLNKQDDGSSMLPEVSSGTLDFKEDGEEKSVAYLSKTCYASKDEEINTENLRRPQKTVDTPPNDSQTSDMKEKEEMKKMEVMEPLELDENSVTDGHEKTNETATFSCHSCNKTFSRRSNLSRHLLVHIGTQPFVCEICKKSFNVKSKLIVHRRIHNSDENSLDAKVDEVEEPKDSDLPVDIKFKTDVDQSFKFKCYVCSKPFKRSSQLNRHIRVHTGEKPFICDTCNKSFSQRKGLTVHLRTHTGERPYPCNVCKKSFMDNSLLKRHLRIHTGDKPFSCDICFKKFTQKVTRDEHLRVHTGDRPFPCDICKKSFKQKSTLEEHRRIHTGDRPFLCDTCGKSFSQRAYYDKHLRSHVSDDMPGDKSRITNPKPKPPAKFPCCVCLKAFRNRCHLERHFRIHTGERPFVCSTCNKSFNEKGSLTVHLRIHTGDRSYHCDYCYKSFITKGMLDRHVRIHTGDRPFACEICNKAFTQKANRDEHRRIHTGERPFLCEICGESFTQKTCYDKHLHWHTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -