Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01000522.1:359310-382732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 39 0.00012 0.0071 17.4 1.4 2 23 6 27 5 27 0.96

2 39 0.0025 0.14 13.2 0.5 2 23 31 52 30 52 0.97

3 39 0.00031 0.018 16.1 0.8 1 23 58 81 58 81 0.97

4 39 7.4e-05 0.0042 18.1 0.3 1 23 88 110 88 110 0.97

5 39 1.6 90 4.5 0.6 1 14 116 129 116 131 0.85

6 39 2e-06 0.00011 23.0 1.8 1 23 132 154 132 154 0.98

7 39 0.0084 0.48 11.6 0.2 2 23 211 232 210 232 0.95

8 39 0.064 3.7 8.8 0.2 2 23 244 265 243 265 0.95

9 39 0.00015 0.0086 17.1 3.6 2 23 268 290 267 290 0.94

10 39 0.00084 0.048 14.7 6.0 1 23 297 319 297 319 0.96

11 39 0.00015 0.0088 17.1 1.9 1 23 325 348 325 348 0.94

12 39 0.031 1.8 9.8 3.2 1 23 355 377 355 377 0.98

13 39 0.19 11 7.3 0.8 1 23 417 439 417 439 0.97

14 39 0.0024 0.14 13.3 4.4 2 23 446 467 445 467 0.98

15 39 7.6e-06 0.00044 21.2 1.3 1 23 473 495 473 495 0.98

16 39 0.012 0.7 11.1 0.3 1 23 501 523 501 523 0.98

17 39 2.3e-05 0.0013 19.7 0.7 1 23 529 551 529 551 0.96

18 39 1.7e-06 9.6e-05 23.3 2.6 1 23 557 580 557 580 0.98

19 39 0.00037 0.022 15.8 2.0 2 23 594 615 594 615 0.98

20 39 0.00031 0.018 16.1 0.7 2 23 622 643 621 643 0.97

21 39 9.2e-05 0.0053 17.8 2.1 1 23 649 671 649 671 0.98

22 39 0.00082 0.047 14.8 0.8 1 23 677 699 677 699 0.97

23 39 4.6e-05 0.0026 18.7 1.8 1 23 705 727 705 727 0.98

24 39 0.00019 0.011 16.8 4.4 1 23 733 755 733 756 0.96

25 39 2.4e-06 0.00014 22.8 0.5 1 23 766 788 766 788 0.97

26 39 0.00032 0.019 16.0 0.2 1 23 795 817 795 817 0.96

27 39 1e-07 5.9e-06 27.0 1.6 1 23 823 845 823 845 0.98

28 39 1.4e-06 8.3e-05 23.4 2.0 1 23 851 873 851 873 0.98

29 39 3e-06 0.00017 22.5 1.0 2 23 944 965 944 965 0.97

30 39 0.00014 0.0081 17.2 0.4 1 23 971 993 971 993 0.97

31 39 1.5e-05 0.00088 20.2 4.1 1 23 999 1022 999 1022 0.98

32 39 0.64 37 5.7 1.3 5 23 1032 1050 1030 1050 0.96

33 39 0.00012 0.007 17.4 1.6 2 23 1057 1078 1054 1078 0.89

34 39 0.0012 0.068 14.3 4.4 2 23 1084 1105 1083 1105 0.96

35 39 1.3e-05 0.00075 20.4 2.7 1 23 1111 1133 1111 1133 0.98

36 39 0.00073 0.042 14.9 0.9 1 23 1139 1161 1139 1161 0.93

37 39 0.0016 0.093 13.9 3.0 1 23 1167 1189 1167 1189 0.97

38 39 4.9e-06 0.00028 21.8 2.3 1 23 1195 1217 1195 1217 0.98

39 39 2.6e-05 0.0015 19.5 0.8 1 23 1223 1245 1223 1245 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	39	0.00012	0.0071	17.4	1.4	2	23	6	27	5	27	0.96
2	39	0.0025	0.14	13.2	0.5	2	23	31	52	30	52	0.97
3	39	0.00031	0.018	16.1	0.8	1	23	58	81	58	81	0.97
4	39	7.4e-05	0.0042	18.1	0.3	1	23	88	110	88	110	0.97
5	39	1.6	90	4.5	0.6	1	14	116	129	116	131	0.85
6	39	2e-06	0.00011	23.0	1.8	1	23	132	154	132	154	0.98
7	39	0.0084	0.48	11.6	0.2	2	23	211	232	210	232	0.95
8	39	0.064	3.7	8.8	0.2	2	23	244	265	243	265	0.95
9	39	0.00015	0.0086	17.1	3.6	2	23	268	290	267	290	0.94
10	39	0.00084	0.048	14.7	6.0	1	23	297	319	297	319	0.96
11	39	0.00015	0.0088	17.1	1.9	1	23	325	348	325	348	0.94
12	39	0.031	1.8	9.8	3.2	1	23	355	377	355	377	0.98
13	39	0.19	11	7.3	0.8	1	23	417	439	417	439	0.97
14	39	0.0024	0.14	13.3	4.4	2	23	446	467	445	467	0.98
15	39	7.6e-06	0.00044	21.2	1.3	1	23	473	495	473	495	0.98
16	39	0.012	0.7	11.1	0.3	1	23	501	523	501	523	0.98
17	39	2.3e-05	0.0013	19.7	0.7	1	23	529	551	529	551	0.96
18	39	1.7e-06	9.6e-05	23.3	2.6	1	23	557	580	557	580	0.98
19	39	0.00037	0.022	15.8	2.0	2	23	594	615	594	615	0.98
20	39	0.00031	0.018	16.1	0.7	2	23	622	643	621	643	0.97
21	39	9.2e-05	0.0053	17.8	2.1	1	23	649	671	649	671	0.98
22	39	0.00082	0.047	14.8	0.8	1	23	677	699	677	699	0.97
23	39	4.6e-05	0.0026	18.7	1.8	1	23	705	727	705	727	0.98
24	39	0.00019	0.011	16.8	4.4	1	23	733	755	733	756	0.96
25	39	2.4e-06	0.00014	22.8	0.5	1	23	766	788	766	788	0.97
26	39	0.00032	0.019	16.0	0.2	1	23	795	817	795	817	0.96
27	39	1e-07	5.9e-06	27.0	1.6	1	23	823	845	823	845	0.98
28	39	1.4e-06	8.3e-05	23.4	2.0	1	23	851	873	851	873	0.98
29	39	3e-06	0.00017	22.5	1.0	2	23	944	965	944	965	0.97
30	39	0.00014	0.0081	17.2	0.4	1	23	971	993	971	993	0.97
31	39	1.5e-05	0.00088	20.2	4.1	1	23	999	1022	999	1022	0.98
32	39	0.64	37	5.7	1.3	5	23	1032	1050	1030	1050	0.96
33	39	0.00012	0.007	17.4	1.6	2	23	1057	1078	1054	1078	0.89
34	39	0.0012	0.068	14.3	4.4	2	23	1084	1105	1083	1105	0.96
35	39	1.3e-05	0.00075	20.4	2.7	1	23	1111	1133	1111	1133	0.98
36	39	0.00073	0.042	14.9	0.9	1	23	1139	1161	1139	1161	0.93
37	39	0.0016	0.093	13.9	3.0	1	23	1167	1189	1167	1189	0.97
38	39	4.9e-06	0.00028	21.8	2.3	1	23	1195	1217	1195	1217	0.98
39	39	2.6e-05	0.0015	19.5	0.8	1	23	1223	1245	1223	1245	0.99

Sequence Information

Coding Sequence: ATGCCCTCGGAGTTGCAATGTGCAGTGTGCAAGAAAACCTGTAAAACTGTCTCGCTACTCAATCGACACATGGCTGTGCACAAGGAGAACAAATGCCCTGTGTGCATGAAAGTGTTTAAACTTAAAGCGAAGCTAACTTTACATATGACCGTGCATAGATCCGATCGTCCATTttcatgtgaaaaatgtggaAGGAAATTCAAAAGTCAAGCTGCTGTATTGCAACACAATCGTCGAATTCATATTGGGTTAGAGAAGAAATTTGACTGTCCCATGTGTGATTTAAAAGCGTCTTCAAAATCACAATTGATAATTCACATGAAAAGGCATTCCAAGGATTATAGTCACTATTGTGATGTATGTGGCAAAGGATATTATACTGAAAGAAACAATTTCCAATGTGAAATATGCGGTAAATACTCTAAAACGTCCTATCTCCTTAAAAGACACATGCGTCTACACGAGAGAAAAGTGTGTGCTGTATGCGAAAAAGAATTTAGgtCGGAATTGTTTTCAATGAATAATACCTATATTGCACCTTTCCACTGGGGTATATTTGGAAATCTGTTTATGATGAAAACGGATGATTTCGATGCACACATCAATACCAATGTATCACCAAAGAAAATAAGTTGTGGAACCTGTGGTAATGAATTTGAAGATGAGCATGCACTGAAGAGTCATATGGACTTACACGAATCTGAAGCACATGTGCCCCCTAAGAAAAAACGATGTGGAATTTGTTCTAAAGAATTTGATGGTGAGCAAGAGCTCAAGGATCATTTTGAGATACATGAAAAACAGTGCGATATGTGTGAAAAAGTGTTCAAACGTAGAGATTCATTGTTCAAACACAGAAAGTTTAAGCATGGTCTAGCCGAGAAAACCCATCATTGTGATGTTTGTGGTAAACGATTTGAATATAATAGTAGGCTGAAGCACCATATGATACTTCATCAGGAAGAGCGGCCTTTCAAATGTGATACTTGTGGGAAAGCCTTCAAAAGCAAAGAAACAATGGCCAACCATAAAAAGTTTTTACATGATCTTACCCAGAACGACTTCAGTTGTACTGTATGTGAATTTAAATGTGCTACAAAGCGTCGATTAGATAGCCACATGCGTATTCATAAGACAGAATATAGTTTCTTTTGTGAGATCTGTCGGAAAGGGGATAACAGTATTGTAGACATATCAAGCGACAGGAAGAAGGTTGTTCGGAAGAAATTTGACGAGCACTCTCAGCGCCACGAATGCCCTGTGTGTGGAAAGTGGTTAAAAGCAGAAACAAATCTGAGATTCCACATGAAGACGCACACAGCTCCACGCTGTATTAAGTGCGAAATGTGCAGCAAAATATGTCAGACGACCAAACTTTTGAAGCGTCACATGAAAACACACACACAAGCACGTCCATACAGTTGCGATATTTGTAATAAATCGTACAAGCGCTCCTTTGAACTGTCCGCGCATCGAAAAGTGCACAGTGGCGAAAAAAAGTACATTTGCAGTACATGTGGATATGCCACAATGTATAAGGCTTACTTGGAGATCCATGAGAAACGACATATTGGCGACTTCAAACACATCTGCAAAGAATGCGGAAAGGGATTCTATACAAACACAGAACTCCAAGGACATATGAATGCCCATTCAGGAACTCGGCCATTCCAATGCGATGTTTGTGGAAAAGCATTTGTGTATAAGCATTACTTAATGACTCATCAAAGGACGCAGCACCTAGAGTCGTCGTCTTCGACCTTGAACAGTGTAGGAAACAGATGTGAGATTTGTGGCAAGAGTTTCAACAGCAAGAACAGACTGATGTTCCATATGAGATCACACGACCAGCCCAAGGAGATCAAATGTTCAGTGTGTGACAGAGTGTTCCTTTCTGGGAAGAACTTAAGGAACCACATGCGCTCCCATACAAAGGATCGTCCGTTTACGTGCGACACTTGCAACAAAAGCTATAAGAGCTCTTACGAACTTACGGGTCATAAGAAAATCCACTCTGGCGAGAAGAATCATATTTGTGATGTGTGTGGTTATGCGACAATTTACAAAGCTTAccttaaaattcaccagaaaagACACATACGAGAGTTCCGATTTCGCTGTAGTGAATGTGGTAAAGGCTACTACACCAACTGCGAGCTACAGGCTCATAGAAATGTCCATACCGGCGAAAAGCCCTTCCAGTGCGATGCTTGTGGCAAGGCATATATTCACAAACATTATCTTGTAGCTCATCAACGATCCCATCATCCAGAACTTCATAGAGACGTTCAGCCTTTCGAATGCGAGACTTGCGGCAAGGTTTTTGCCTACAAAAAATCTCTTACCATGCACATGAATGCTCATATGGGTGAACACCAACTTTATCTTTGCGACCTCTGCGGCAAGGCAATGACGAGCAACGCTTCTTTGCAGATTCATAGGAGAACTCATACGGGCGAGAAACCATTTATTTGTGACCTTTGTGGAAAGACTTTTAACAAACGTAGTAATCTTAGAATTCACCAGCGCACACACACCGGTGAACGTCCTTATACATGCGACCAGTGCGGCAAAACGTTCACCCAACGTTCTACTTTAGTAATCCACAAACGATATCATACAGGGCAGAGGCCTTACAAGTCTACGCGAAGTTTTCTCTGGATCTTGGATACCCCATCATCTTCGGCGGTAGGAATAGGTTCTTTGGATGTGTTTAAAGCTCTGAATTTATCTACAACACCAGCACAGGCTACAACTGCGACTAAACCTTCTACGACAACAGATAAACTCGATAAAGATCCACTGGACGCTGAAAACCTTGTGGCTGCTACATGTCCCACTTGTGGAAAATATTTTACCAACAAAGCAACCTTACAAAAGCATATTAGCAGTCACAGTCCAGAGAAGAAATTCAATTGTCCCATTTGCCAGAAAAATTTTAAGACTGGAAGATCTCTGAGAGCTCATGGAATTACTCATCGAGAAGATCGTCCACATAAATGTGAAAGTTGTGAGAAGACTTTCAAGAGAAGGTATGAACTGACCAATCATGTAAGAACCCTCCATTCAGGGTCGACGAAGAAATACAGTTGTGAATGTGGTTACAAGACAAACAGCTCGAAGATGCTGGAGCTTCATAAAAAAAGACATGTTCGCGACTATCAATGCACTTGTGAAATTTGTGGCAAAGGTTACTATACAACGTCCGAATTAAAATTACATCTAGAACGTCATTCAGGTCAGATATTGACCTGTAATATATGCCATaaaaatttttcatcaaaatcTTATTTGGAGTTTCATAAACGTATGCATGGAGCTGAGAAGAAATTCCGGTGCGATATCTGTGGAAGAGGATTTAAGTATCCAACCCTATTGAAACACCACAAGAATACTCATAATGCCGAGCACAAGTACATATGTGATGTTTGTGGAAAGGCTGTCAGGGACAAGACCACCCTCAGGAAACACTGCATGGTTCATACTGGCGAAAAACCTTACTCGTGTAATATGTGTTCCAAAGTTTTCCGATCTCTCAGTACTCTGAAGTGCCATTTGCTTGTGCATACTGGCGAACGTCCGCACAAATGCACGATTTGTGAGAAAACATTCACTCAGAGATCCCCTCTTGTAATACACATGCGCTATCATACTGGCCAACGACCCTACAAATGTAACGTCTGCTCTAAGGGATTTGTTAGCAAAACTGTCTTGATAATGCACCAAAGAACACATTAA
Protein Sequence: MPSELQCAVCKKTCKTVSLLNRHMAVHKENKCPVCMKVFKLKAKLTLHMTVHRSDRPFSCEKCGRKFKSQAAVLQHNRRIHIGLEKKFDCPMCDLKASSKSQLIIHMKRHSKDYSHYCDVCGKGYYTERNNFQCEICGKYSKTSYLLKRHMRLHERKVCAVCEKEFRSELFSMNNTYIAPFHWGIFGNLFMMKTDDFDAHINTNVSPKKISCGTCGNEFEDEHALKSHMDLHESEAHVPPKKKRCGICSKEFDGEQELKDHFEIHEKQCDMCEKVFKRRDSLFKHRKFKHGLAEKTHHCDVCGKRFEYNSRLKHHMILHQEERPFKCDTCGKAFKSKETMANHKKFLHDLTQNDFSCTVCEFKCATKRRLDSHMRIHKTEYSFFCEICRKGDNSIVDISSDRKKVVRKKFDEHSQRHECPVCGKWLKAETNLRFHMKTHTAPRCIKCEMCSKICQTTKLLKRHMKTHTQARPYSCDICNKSYKRSFELSAHRKVHSGEKKYICSTCGYATMYKAYLEIHEKRHIGDFKHICKECGKGFYTNTELQGHMNAHSGTRPFQCDVCGKAFVYKHYLMTHQRTQHLESSSSTLNSVGNRCEICGKSFNSKNRLMFHMRSHDQPKEIKCSVCDRVFLSGKNLRNHMRSHTKDRPFTCDTCNKSYKSSYELTGHKKIHSGEKNHICDVCGYATIYKAYLKIHQKRHIREFRFRCSECGKGYYTNCELQAHRNVHTGEKPFQCDACGKAYIHKHYLVAHQRSHHPELHRDVQPFECETCGKVFAYKKSLTMHMNAHMGEHQLYLCDLCGKAMTSNASLQIHRRTHTGEKPFICDLCGKTFNKRSNLRIHQRTHTGERPYTCDQCGKTFTQRSTLVIHKRYHTGQRPYKSTRSFLWILDTPSSSAVGIGSLDVFKALNLSTTPAQATTATKPSTTTDKLDKDPLDAENLVAATCPTCGKYFTNKATLQKHISSHSPEKKFNCPICQKNFKTGRSLRAHGITHREDRPHKCESCEKTFKRRYELTNHVRTLHSGSTKKYSCECGYKTNSSKMLELHKKRHVRDYQCTCEICGKGYYTTSELKLHLERHSGQILTCNICHKNFSSKSYLEFHKRMHGAEKKFRCDICGRGFKYPTLLKHHKNTHNAEHKYICDVCGKAVRDKTTLRKHCMVHTGEKPYSCNMCSKVFRSLSTLKCHLLVHTGERPHKCTICEKTFTQRSPLVIHMRYHTGQRPYKCNVCSKGFVSKTVLIMHQRTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -