Bger027051.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- -
- Assembly
- GCA_003018175.1
- Location
- PYGN01000055.1:741422-766090[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-06 0.0034 17.7 0.0 2 37 18 54 17 60 0.90 2 2 4e-13 3.2e-10 40.2 0.0 1 44 387 430 387 431 0.94
Sequence Information
- Coding Sequence
- ATGTGTGGGGTTATTTTCAAGAAGACAGCATCCAAGATAAGAAAATGGAATGAAACAAACATGAAAATGGCCGTTGATGGTATGTTGGCAGGAACATTCTCTCTAAGAGAAGCAGCTGCTCGCTTCTGTGTACCTAAAAGTACTTTGAGTGATCGCGTTTGTGCCCTTAGAATGGGGAAATTCATTGAAATTGCTCCTTCCTTGGGGCGTTTTAAAGAAACCTTTGATAAAGACCTAGAGGATGAACTTGTTTCATATCTTAAATATCTAGATAGCTGTTTCTTGCCAGTAAATAAATCTGAACTCTTAAAGCTGGTCTATGATCTGGCTGAACATTTCAAATTGCCCCACCAATTCAATAAAGCAAAGAAGACTGCAGGCGATAGCTTTTATCGGAGATTTATAATTCGCCATCCCGAATTTTCTTTTCGTTTTGCCCGATCGACTAACCAACAGAGAGATCAAGATTTTAACCAGGATGCATTTTTTGACAAATTAGAAGAACTTACGAATAAATTCTCGTTTTCTCCgaataaaattttccattgtGATGAGACAGTTGTCAGTATCGTACATTCAAAGTCTCAGAAAATGTCTATTAAAGGAAAAAAACGATTGAACAACTCACTAACAGGTGAATGTAGCAGAAATATTAGAGTGATGCTTTGCGCCAATGCTACAGGAGAACAATTCATTCCACCTTTATTTGTATTTCCGAGAATTCAAATGGATCAACAATTGATGAAAGAAGCACCAGAAGGTAGTGTTTTTGATGTTGAAGAAAGTGGTCAGATTTCACTTTCAGGATTTATTAAGTGGCTGAAGGCTTTCGTTAAGAGAGTGAATCCTACAGAACAAAATCCAGTTCTGCTTGTCTTAAATGGTCATAGTATCCACAAAACCCTTGAAACTCTTCTTTTTTGCATAGAGCATGACATCCATATTTTGAGCCTCCCACGTAGCACAGCACACGACCTCCTTCCTTTGGATCATGCAATCATTGGGATTTTCAAATCTGCTTACTATGAAGCATTTGACGAGTGGATGAACGATTATGGAAAACTGGGGTTCAAAATTACAGATAAAGACATCTGTAAATTCGTAGGAACTGCATTCACAAAAATTTGCGTAAATACGCCACCAAAAAGGAAACAATGGGATCCTGAAAATATGAGCAAGGCGATCAGTGACGTGAGAAATAAGAAAATGGGATACTTAAAAGCTTCTAAGCTGTATAACGTTCCACACACAACTTTAAGGCGACTAATTAAATCTAAATTGCCATTGAAAGATGCTGTTAGTCAGAAACTTGGAAGAAAAGTGGTGTTAGGTTCGAAATTAGAAGAAGAGTTAGTAAGTTATCTTCTGGTCATGGAAAAGCAATTTTTTGGTCTGACAAGGAAAGATGTGAGGCAGATGGCTTATCAGTTAGCTGCTCAGAATGGGCTAGCACATCCTTTCTTGAAGGAGTGTGCAGGCAAGGGGATATATCCCTTAAATCCTAATGTTTTTTCGGAAGAAGACTTCATTGCAACTGCAGTTGAAGCATCTGTAACTTCTTCAAATAATCCCATGCCGAATGTCAGCATACATTCGCCTGAAGTCAACGATGGGGCTGGACCTTCTACTGCTACAACACCGAACGTCAGCACTCGTTCTCTTCAAATTGCTGATGGGGCTGGACCTTCAGCTGCTACAATGCCGAACGTCAGCACTCATTCTCTTCAGATCACCGACAGACCTGGACCGTCAACTGTAAATGTAACGCCATGGGATATATCTCCAGTCCCAAAAATTGTGAAACGTATGGGAACACGTGGTAGAAAGGCTGGTTCTGCAGCTATTCTTACGTCTTCTCCAtacaaaaatgaattaataaattaccTGCAGCAACAAACCATAAAAGCAGCACAGAAAAAACTTTCTTTTCCAAACAAAAGCTGCTCAAGTAAGGAAATAAAAAACTCTCGGCTGACAACGAACCAAAAGAGAAAGCAGAACAAAAAGAACATTGAACTAATTGATTCTGAGGAAGGGGATGAAGTAATGAGCATCAGAGATGATTCGTCTGACATCAGCAGTGTTGAAAATCCAGAAAAAGTGGATTGTGATGCAACCTGCATGTTTTGTGAAGGGAAATTTTTGAGCGATATCCATGGAAAAGAATGGGTTATGTGTATTTCGTGTTGTATGTGGGCACATTCAGAATGTGCCGGATTGGAAAAGGGGTCATATGTCTGTGATTTTTGTAAATAG
- Protein Sequence
- MCGVIFKKTASKIRKWNETNMKMAVDGMLAGTFSLREAAARFCVPKSTLSDRVCALRMGKFIEIAPSLGRFKETFDKDLEDELVSYLKYLDSCFLPVNKSELLKLVYDLAEHFKLPHQFNKAKKTAGDSFYRRFIIRHPEFSFRFARSTNQQRDQDFNQDAFFDKLEELTNKFSFSPNKIFHCDETVVSIVHSKSQKMSIKGKKRLNNSLTGECSRNIRVMLCANATGEQFIPPLFVFPRIQMDQQLMKEAPEGSVFDVEESGQISLSGFIKWLKAFVKRVNPTEQNPVLLVLNGHSIHKTLETLLFCIEHDIHILSLPRSTAHDLLPLDHAIIGIFKSAYYEAFDEWMNDYGKLGFKITDKDICKFVGTAFTKICVNTPPKRKQWDPENMSKAISDVRNKKMGYLKASKLYNVPHTTLRRLIKSKLPLKDAVSQKLGRKVVLGSKLEEELVSYLLVMEKQFFGLTRKDVRQMAYQLAAQNGLAHPFLKECAGKGIYPLNPNVFSEEDFIATAVEASVTSSNNPMPNVSIHSPEVNDGAGPSTATTPNVSTRSLQIADGAGPSAATMPNVSTHSLQITDRPGPSTVNVTPWDISPVPKIVKRMGTRGRKAGSAAILTSSPYKNELINYLQQQTIKAAQKKLSFPNKSCSSKEIKNSRLTTNQKRKQNKKNIELIDSEEGDEVMSIRDDSSDISSVENPEKVDCDATCMFCEGKFLSDIHGKEWVMCISCCMWAHSECAGLEKGSYVCDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -