Bger016365.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- bab2
- Assembly
- GCA_003018175.1
- Location
- PYGN01001859.1:64096-106585[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0013 1.1 9.7 0.0 2 35 222 255 221 262 0.85 2 4 5.6e-11 4.5e-08 33.3 0.0 3 41 273 310 271 313 0.90 3 4 0.12 95 3.4 0.0 21 37 345 361 331 369 0.77 4 4 1.9e-09 1.5e-06 28.4 0.0 4 38 389 423 386 427 0.90
Sequence Information
- Coding Sequence
- ATGGGCACCAGGCCTCAACATTACTGTTTAAAATGGAACAATTACCAGAGTCATGTAGCAGAAATTTTCACACAGTTACTTCAAGCTGAGTCACTAGTTGATGTCACTTTGTGTGCAGAAGGTCATAAAATTCATGCCCATCGAATCGTACTATCTGCATGCAGCCCGTATTTTCAGgAAATATTAACAAATTCAGAAGATTCTCATCCGTATATTATTTTGAGTGATATGACCTCTGAAGATGTGAAATCAATTGTGGAGTTTGTTTATAGAGGAGAGCTTAATGTTGGTGCAGATCGATTTCCATCAGTTTTGAAAACAGCTGAGGAATTACAAATAAGAGGTCTTATGgaaGTCAGCAGCCATTTACCCACATTAAAAAGCGATGATATTGATGATTCTAATTCGGAAGTCCTCACTTCAGTAACAGACACTGATATAAGTCAAAATGTGAACCAAGGTTTAGATGTTCTATCAAATGTTACACAAACTGAAACTGTAGATATTTTCATGGAAGCATCTGAAAACATAGTAGAGCAGGTTGCTATAGAAGGTTCAAGACTGGTAAGAAAtGAATCTAAGGATTTCATTACTGCTGATAAGAAATTTGAagatgaaaagaaaaagaaacacaggaGAGAAACAAATAAGAGGTTTTACAGTGAGGATATGCTGTTGGCTGCATTAGAAGATCTTCGTGCAGGCCGTACCCTTGTGGAAACTTCTGCAAATTATCATATTCCACGTTCAACTTTATATGTTAGAGCTAGAGCTCAGGGAATACCACTGACTATAACCAGACAGGAACATTCTGGAGAAAGAGTACAAGCAGCAATTCGTGCAGTTTCagATGGTGCAAGTTTACAACAAGCAGCAGAAATATTCAAAATTCCAAAGACAGTGCTGTGGAGGCGTGTACAGAAAGAAATGGGTAGTTATGCAATGAGTCGACGTTCTAGAATGAAACAATCCTATGATTTGGAAAAGAAGCAAGCTGCAGTGAAAGCACTGGAAAGAGGAGAGAACCTTACCAAAGTATCACATGAATTTCagATACCTAAAACTACTCTGTTCCGTGAAAAAGCTCGATTGGTAGAATCAGGAAGACTACCTTGGACATGTTTGAGGAAACGTGATCCTGACATCAGTGGGTTAAAACAACACAGGCTCAGCGAAGCTGTAGCTGCATGTAAAGAAGGAAAGATGTCACAAGCCGTAGCATCACTCACATTTCAGGTTCCAAAAACAACAATTTGGCGTAAACTTCAAAAGGGTTCTAAACCAGATCCTCAGACACAAACAGTAGAGACTTCTGAAAATGAAGCAGATACCGCTGCAGCTCAGCTTCAAGAGCGGACAGAATTTGCTTTCAATGAGGTGTCGACACAAATTCCAGTGACGTATATTGATGAATCGGATTTTTCTGAAGCGTCTCTCATAATCCTTACAACTGGAAGTAGTGATAACATAGATGAACAGATTATTGTTGATAGGGATACCTTACATAATGATGATCAAACATCAAAAAGCTATTCTGGAAAAGAAGattcttcagaaaaaaataattccaaccAAGATTCTGGTTCTGCTTCATGA
- Protein Sequence
- MGTRPQHYCLKWNNYQSHVAEIFTQLLQAESLVDVTLCAEGHKIHAHRIVLSACSPYFQEILTNSEDSHPYIILSDMTSEDVKSIVEFVYRGELNVGADRFPSVLKTAEELQIRGLMEVSSHLPTLKSDDIDDSNSEVLTSVTDTDISQNVNQGLDVLSNVTQTETVDIFMEASENIVEQVAIEGSRLVRNESKDFITADKKFEDEKKKKHRRETNKRFYSEDMLLAALEDLRAGRTLVETSANYHIPRSTLYVRARAQGIPLTITRQEHSGERVQAAIRAVSDGASLQQAAEIFKIPKTVLWRRVQKEMGSYAMSRRSRMKQSYDLEKKQAAVKALERGENLTKVSHEFQIPKTTLFREKARLVESGRLPWTCLRKRDPDISGLKQHRLSEAVAACKEGKMSQAVASLTFQVPKTTIWRKLQKGSKPDPQTQTVETSENEADTAAAQLQERTEFAFNEVSTQIPVTYIDESDFSEASLIILTTGSSDNIDEQIIVDRDTLHNDDQTSKSYSGKEDSSEKNNSNQDSGSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00209922;
- 90% Identity
- iTF_00209922;
- 80% Identity
- iTF_00209922;