Bger025843.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- retn
- Assembly
- GCA_003018175.1
- Location
- PYGN01000009.1:2708148-2720652[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-15 1.8e-11 44.9 0.0 18 80 6 66 1 69 0.91 2 2 0.77 2.7e+03 -0.5 0.0 71 81 81 91 66 107 0.59
Sequence Information
- Coding Sequence
- ATGGACCCCACATGGACTCCAATCAACCGACTTCCAATCATGGCCAAGTCTGTGCTCGACTTGTATGAGCTTTACAATCTAGTCATCGCCCGTGGAGGGCTCGTCGACGTCATCAATAAGAAATTGTGGCAGGAAATCATCAAAGGCCTGCACCTTCCTTCTTCCATCACGTCGGCTGCATTCACACTGAGGACACATCAGGTGAACAGGGGGGAAGGTTTGGAGCACGGCCAAGCTCAACAAGATACGCCGCAGATGATAAAGCACTACTACGTTCCTCTGCCCAATCTTATGAAAGCGAAGAGGAAGAAGAACGTAGCAAAGTGTAAGAAAATGTaa
- Protein Sequence
- MDPTWTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHQVNRGEGLEHGQAQQDTPQMIKHYYVPLPNLMKAKRKKNVAKCKKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -