Bger001398.1
Basic Information
- Insect
- Blattella germanica
- Gene Symbol
- Kdm5d
- Assembly
- GCA_003018175.1
- Location
- PYGN01000138.1:31764-67763[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 2e+04 -3.3 0.0 5 24 51 71 49 91 0.75 2 2 1.6e-24 5.6e-21 75.4 0.0 2 89 207 290 206 290 0.95
Sequence Information
- Coding Sequence
- ATGGTCTCCAGAGGAGAAAAATCAAGTGGCTTCTCGAAGAGCCCTACAAGTGACAAGCTAAAGGTACTTTTGCCCGATTTTGAGTTCACTGTGCCACCTGAAGCTCCTGTTTTTGAACCCACTGTAGATGAATTTCAAGATCCTTTGGGCTACATAAGGAAAATTCGACCTTTTGCAGAACAATCAgggatatgcaaaataaaacctCCACCGaaTTGGCAACCTCCATTTGCTGTTGACGTTGACCGATGTGGTTTCCAATCTAGTGTCATGGATGAATCTGTCAATGGCTCAGATGATGCAAGTGATTATGTGCCAGATTTAATTCAACTTGGCCAAGTAGGGAATGTTGCTGTAGAAGTTTCTGCAATTGATGAGGAGATTCCATGCTTCAATGAAAATTGGGATATCATTCCTAAAATGAATCCAGAACCCGATAGTGATAAGAAAGAAtgtgagaaagaagaagaaaacattgaACCCATTCCCTTAAATGAAGCCCTTGGTAGCATTAAAATGCACAGGGCTCTAGTCCATGAACTAGGAAATCAGACATTATTAGACTTGCTTGCCGCAGTAGAGAAAGAATATGAGAACTGTATAGCAAAAACTCGGATCAAACTCAACTTCCTGGACCAAATTGCAAAGTTTTGGGAGTTGCAAGGATCTTCTTTGAAAATTCCTATGGTAGAAAGAAGAGCATTGGATTTATATACATTGCATAGACTGGTTCAGGAAGAAGGTGGAGTTGAAGTTACAACAAGGGAAAGAAAATGGACACGAGTATCTGCTAGAATGGGATTCCCTCCTGGAAGAGGAATTGGAACACTTTTGAAAAATCACTATGATAGGATTTTATATCCATTTGATGTGTTTCAACAAGGAAAACTGATTGCCAATATTAAGATTGAACCAGAGGGTGAAGAATATGAGAAAAGAGATCAAGATTATAAACCACACGGTATTCTGGCACGACAAGGCATTAAACCACCACAAGAGAAATACAGCAGGCGATCAAAGCGCTATGGACCTGGTGAATGTTCTGAACTGGAAGCTCTGGTTTGTGATTATTTATTACCTCTAGAAATTAACCGAATTCtgcactga
- Protein Sequence
- MVSRGEKSSGFSKSPTSDKLKVLLPDFEFTVPPEAPVFEPTVDEFQDPLGYIRKIRPFAEQSGICKIKPPPNWQPPFAVDVDRCGFQSSVMDESVNGSDDASDYVPDLIQLGQVGNVAVEVSAIDEEIPCFNENWDIIPKMNPEPDSDKKECEKEEENIEPIPLNEALGSIKMHRALVHELGNQTLLDLLAAVEKEYENCIAKTRIKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRLVQEEGGVEVTTRERKWTRVSARMGFPPGRGIGTLLKNHYDRILYPFDVFQQGKLIANIKIEPEGEEYEKRDQDYKPHGILARQGIKPPQEKYSRRSKRYGPGECSELEALVCDYLLPLEINRILH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -