Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: stc
Assembly: GCA_905147135.1
Location: LR990048.1:5270196-5297154[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.8e+04 -4.3 1.6 15 19 463 467 462 467 0.81

2 13 1.8 3.4e+04 -4.0 2.7 1 6 499 503 495 506 0.72

3 13 1.6e-05 0.3 12.2 18.5 3 19 510 526 509 526 0.92

4 13 8.4e-05 1.6 9.9 20.7 1 19 562 580 562 580 0.97

5 13 1.2e-08 0.00023 22.2 10.5 1 19 621 639 621 639 0.98

6 13 5.3e-05 1 10.5 10.5 1 19 680 702 680 702 0.87

7 13 2 3.8e+04 -5.3 2.2 6 10 732 736 732 736 0.94

8 13 0.00057 11 7.2 6.4 1 11 742 752 742 753 0.95

9 13 0.02 3.7e+02 2.3 1.7 2 10 758 766 758 766 0.96

10 13 3.7e-06 0.069 14.2 14.0 3 19 774 790 772 790 0.92

11 13 0.12 2.2e+03 -0.2 16.1 1 18 829 845 829 846 0.85

12 13 2.2e-08 0.00041 21.3 13.1 1 17 882 900 882 906 0.83

13 13 0.0052 98 4.2 7.9 1 14 912 924 912 937 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.8e+04	-4.3	1.6	15	19	463	467	462	467	0.81
2	13	1.8	3.4e+04	-4.0	2.7	1	6	499	503	495	506	0.72
3	13	1.6e-05	0.3	12.2	18.5	3	19	510	526	509	526	0.92
4	13	8.4e-05	1.6	9.9	20.7	1	19	562	580	562	580	0.97
5	13	1.2e-08	0.00023	22.2	10.5	1	19	621	639	621	639	0.98
6	13	5.3e-05	1	10.5	10.5	1	19	680	702	680	702	0.87
7	13	2	3.8e+04	-5.3	2.2	6	10	732	736	732	736	0.94
8	13	0.00057	11	7.2	6.4	1	11	742	752	742	753	0.95
9	13	0.02	3.7e+02	2.3	1.7	2	10	758	766	758	766	0.96
10	13	3.7e-06	0.069	14.2	14.0	3	19	774	790	772	790	0.92
11	13	0.12	2.2e+03	-0.2	16.1	1	18	829	845	829	846	0.85
12	13	2.2e-08	0.00041	21.3	13.1	1	17	882	900	882	906	0.83
13	13	0.0052	98	4.2	7.9	1	14	912	924	912	937	0.84

Sequence Information

Coding Sequence: ATGTCACAGTGGAACAATTCATACGCTTACAATAATCAATACCAAGGTGCTAGCACCTGGAACAGTGAGATGAATGGTCAATATGGGAACCAAGGCTTCTATCCTAACCCCAACAACCAATATGTGAGTTTCAATGAGTTTTTGTCACAGATGCAGGGTAACAATGAAGCTGCTTCAAATAATGCCAACTATAATAACCAGCAGTACCAGAATTATCCACATAACCAACAATATAACTATCAAGAGGTACCCTCAAGTTCGCAGAATGCACAAATGCAATCTTATGCTTACAACTCAAATccaaataacacaaatactgaAGATTCTACAGCTCCGGTTAACCCAACAGCGAAGAAGGCCATTACCAGTGACATAGTAATTAATTCTAATTTAACACCTACTGCTATAGAGTTTGTTCCAAAAAGCTCTAATATAGTAATGTCTAGTAATATAGATGCTCAACCAGAGTCTTCCACTTCATTTAAACCTACTAAGGAATCTAAAAGTATTCACGGTAGCTCCTCAGATAAAAATTGGAGAGAAAGACCTCAATCTTCCCATGATAGTTCCCGTCCCGCAGACtcattaaaacaaaatgaatcGAACAGAAATGATTCCAGTAGTTATAAAAACTATGATTCCAATAGCTATAATAGAGAGTCAAATAATAAGATTCGTAACAGAGACCGAAAAAATGATAGCCGTAACTACTCTACTGAAAATAGTGGACATAGCAATGGATCCCAGAGTAATTATGATTCTAGTAATCGCCAAACTGAGAATGGTCGTAATTATGGTAGTAGTCGCCGAAACTATGATAGCAACCATGATGACTCAAATGGTCAGTATGAATCTAGCAATTATGATAGCAATGGCCGGAACTATGAGAGTAGCAGTCGTTACAACGAAAACAGAAGCCTGTTTAAGGGGAAAGGGAAGAAAGATTCTGAACGCACATTTTATAATagcggtataaataaaaatcaagatgTTAGAAATGGAAGGGGTGAAGCACCAAATAAGAAAAATTGGATTGGCAGCCAGAGATTGAGAGCTGCAGACAGGAACAGTGTCGAAGATGAACAATATGCCAGCAGCTATTTACAAAGTAGAGAAGACAGAGACAAAACAGTTAAATCTGAAAATTTACCCAGTCCAAGAAGAAATAAAAGTGCTGGGGACCAAAAAGGTACAGTGAACAAAGAAATGACTCAGAGAGAGCGCCTAACTGAGCAGTTAAACAAAGGGACCCTGGAATGCTTGGTCTGTTGTGAACGTGTGAAGCAAACAGACTCAGTGTGGTCGTGTGCCAACTGCTACCATGTACTGCATCTTCGCTGCATCAAGAAGTGGGCTACAAGCAGTGTTGTGGAGGGCAAGTGGCGTTGTCCCGCCTGCCAGAACACCTCAGAGCAAATCCCGAGCGAGTACTGGTGTCTTTGTGGAGCGGTTCGCTCGCCCGAGTGGTCGCGAGGGGCGGCCGGGGCGCACTCGTGCGGTCATGGCTGCCGGCGGGCACGGACCTGCACGCACGCCTGCCCGCTGCCGTGCCACCCGGGGCCATGTCCGCCCTGCCAGGCTATGGTCACCAAGGAGTGCGGCTGCGGCGTAGAGAAGCGCCAGATGATGTGCAGCAACAAGCAGCCGCTGGAGTGCGGGCGGCAGTGCGGCCGCGAACTGCTCTGCGGCAATCACCACTGCGAGCAACAGTGCCACCCGCCGCCCTGCGAGCCTTGCACGCATACCGTTACGCAGGAATGCGCGTGCAAGACGCCCCAAAGCCGCACGGTGCCGTGCACGGCCGAGTCGAGCGGCACGGCCTGGTTCGCGTGCGGCGGGCCGTGCGCGCGCGTGCTCTCGTGCGGGGTGCACGCGTGCTCGCGCACGTGCCACGCGGGCGACTGCGAGTCGTGCAAGCTGATGCCCGAATACGTGACCACATGCCCGTGCGGGAAGAACAGGTTAGATAAGGACAAACGCAAAGCCTGCACCGACCCCATACCCGTGTGTGGCAACATCTGCGCCAAGCCGCTGTCGTGCGGACCCGCTGGCGACAAACACTTCTGCAAAATCAACTGCCATGAAGGCGCGTGTCCCGTGTGCCCGGACAGCACGCTGATGCAGTGCCGCTGCGGCCACTCCAGCCGGGAGGTGCCGTGCGCCGACCTGCCCGATGTGGGCTCCTACGTGCTGTGCCAGAAGAAGTGTAATAAGAAGCTATCCTGCGGGCGGCACCGCTGCCGCGCGGTGTGCTGCGCGGCGGAGCGCTCCGGCCAGCACCGCTGCGGCGTGGTGTGCGGCCGCGCGCTCTCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACGGGACACTGCGCGCCCTGTCCGAGGCTCAGCTTCGAGGAGCTCCGCTGTTCTTGCGGCGCGGAGGTGGTGTACCCGCCGGTGCGCtgcggcgcgcggccgcccgccTGCGCCGCCGAGTGCACCCGCGCGCGCCCCTGCGGACACGCCGCGCACCACGCCTGCCACGCCGGACACTGCCCGCCCTGCGTCGTGCTCACCACCAAGATGTGCCACGGCCGGCACGAGGAACGCAAGACCATTCCGTGCTCTCAAGACGAGTTCTCGTGCGGCCTGCCGTGCGGAAAACCTTTGTCCTGCGGCAAGCACACCTGCATCAAGACCTGCCACAAGGGGCCTTGTGACTCTACCAAGTGTGCCCAACCGTGCACCGCGCCTCGCACGGCTTGCGGCCACTGGTGCGCTGCCGCCTGCCAcgcgggcgccggcgccggcacCGCCTGCCCCGCCACCGCACCGTGCCGCCGCCCCGTCACCGCTTCTTGCCAGTGCGGACGCCGGAAGCTGGAGCGCAGCTGTGCGGACAACGCTAAGGATTTGGCCAAGATGATGGCGGCGCTGACGGCGTCCCGCGTGCAGGAGGGCGGCGCGGTCGACCTCTCCGACGTGCAGCGGCCCGGCGCCATGCTCAAGAcACTCGAATGCGACGACACCTGCCGCGCCGAGGCTCGCTCCCGGCAGCTAGCACTAGCGCTCCAAATCCGGAACCCAGATGTCCAGGCGAAGCTGGCGCCCCGCTACGGCGAGTCGCTGCGAGCGCTCGCCGCCCGCGAACCCGCCTTCGCGCACAACGCGCACGAGAAACTGACAGAGCTCGTGCAGCGGGCTAAGAAGTCGAAGCAGAAGACGCGCTCGTACTCGTTCCCGTCCATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGACGCCGAGCCCAACCGGAACGTGGTCGCCACCGCCGACCGGGAGAAGTCGTGGCTGCCAGCGATGAGCGTGCTGGAGGTGGTGTCCCGCGAGGCGGGCAAGCGCCGCGTGCCCGGGCCCGTGCTGCGCGCGCCGCCCACCGCGCAGCCCAGCGCCAGCACCGCTGGGGCTGCCAAACCATCGAGCGGCTGGGCGACTCTGACGTCCACGAACGCTTGGGCGGCTCGCAGTCAGGCGCGGGCCGGCCCCGCAGCCCCCGCACCCCCCACCACTGTCACTCTCGCCCCCTCTACCCCCGCCCCCGCCTCTCCCCCCAAAATAGACTACTTCGACAACCCCCCCGAGTAG
Protein Sequence: MSQWNNSYAYNNQYQGASTWNSEMNGQYGNQGFYPNPNNQYVSFNEFLSQMQGNNEAASNNANYNNQQYQNYPHNQQYNYQEVPSSSQNAQMQSYAYNSNPNNTNTEDSTAPVNPTAKKAITSDIVINSNLTPTAIEFVPKSSNIVMSSNIDAQPESSTSFKPTKESKSIHGSSSDKNWRERPQSSHDSSRPADSLKQNESNRNDSSSYKNYDSNSYNRESNNKIRNRDRKNDSRNYSTENSGHSNGSQSNYDSSNRQTENGRNYGSSRRNYDSNHDDSNGQYESSNYDSNGRNYESSSRYNENRSLFKGKGKKDSERTFYNSGINKNQDVRNGRGEAPNKKNWIGSQRLRAADRNSVEDEQYASSYLQSREDRDKTVKSENLPSPRRNKSAGDQKGTVNKEMTQRERLTEQLNKGTLECLVCCERVKQTDSVWSCANCYHVLHLRCIKKWATSSVVEGKWRCPACQNTSEQIPSEYWCLCGAVRSPEWSRGAAGAHSCGHGCRRARTCTHACPLPCHPGPCPPCQAMVTKECGCGVEKRQMMCSNKQPLECGRQCGRELLCGNHHCEQQCHPPPCEPCTHTVTQECACKTPQSRTVPCTAESSGTAWFACGGPCARVLSCGVHACSRTCHAGDCESCKLMPEYVTTCPCGKNRLDKDKRKACTDPIPVCGNICAKPLSCGPAGDKHFCKINCHEGACPVCPDSTLMQCRCGHSSREVPCADLPDVGSYVLCQKKCNKKLSCGRHRCRAVCCAAERSGQHRCGVVCGRALSCQLHRCEEFCHTGHCAPCPRLSFEELRCSCGAEVVYPPVRCGARPPACAAECTRARPCGHAAHHACHAGHCPPCVVLTTKMCHGRHEERKTIPCSQDEFSCGLPCGKPLSCGKHTCIKTCHKGPCDSTKCAQPCTAPRTACGHWCAAACHAGAGAGTACPATAPCRRPVTASCQCGRRKLERSCADNAKDLAKMMAALTASRVQEGGAVDLSDVQRPGAMLKTLECDDTCRAEARSRQLALALQIRNPDVQAKLAPRYGESLRALAAREPAFAHNAHEKLTELVQRAKKSKQKTRSYSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVVSREAGKRRVPGPVLRAPPTAQPSASTAGAAKPSSGWATLTSTNAWAARSQARAGPAAPAPPTTVTLAPSTPAPASPPKIDYFDNPPE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208488;
90% Identity: iTF_00208488;
80% Identity: -