Blac030110.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blastobasis lacticolella
Gene Symbol
nfxl1
Assembly
GCA_905147135.1
Location
LR990063.1:12432303-12434774[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 3.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.13 2.4e+03 -0.3 0.4 4 10 169 175 168 175 0.95
3 18 5.7e-08 0.0011 20.0 14.2 3 19 186 202 185 202 0.95
4 18 3.1e-07 0.0059 17.6 13.8 1 19 237 255 237 255 0.93
5 18 3.5e-10 6.6e-06 27.1 12.3 1 19 290 308 290 308 0.99
6 18 4e-06 0.075 14.1 20.7 3 19 345 361 337 361 0.86
7 18 0.62 1.2e+04 -2.5 0.5 1 5 370 374 370 379 0.80
8 18 2.9e-06 0.055 14.5 18.2 1 18 395 412 395 413 0.97
9 18 7.8e-09 0.00015 22.8 11.8 1 19 422 440 422 440 0.98
10 18 0.55 1e+04 -2.3 0.8 5 10 468 473 468 473 0.90
11 18 0.00092 17 6.6 3.6 9 19 488 498 486 498 0.89
12 18 0.019 3.7e+02 2.3 9.1 3 12 509 518 508 518 0.90
13 18 0.35 6.5e+03 -1.7 3.6 14 18 547 551 547 552 0.87
14 18 0.14 2.6e+03 -0.4 0.6 7 12 567 572 567 578 0.84
15 18 8.3e-05 1.6 9.9 4.8 1 11 588 598 588 599 0.97
16 18 1.7 3.1e+04 -3.8 1.6 15 18 613 616 613 617 0.87
17 18 2.5e-05 0.47 11.6 14.4 4 18 630 645 628 646 0.83
18 18 0.00012 2.3 9.4 11.8 1 16 687 701 687 706 0.90

Sequence Information

Coding Sequence
ATGGCTCGGCGATATCAAGATGCGGCTGCGAAATTGCAGCAAAGCGTTCAACGGCATTTGAAGGAGATGAAAGAGCTCTCCTCGTCTGATGAAGAAGACGATCTTGAATCTAGCGTTTTAGATGGAGTCTTCAAGAAATACCAGAGTGGTGGCGGCGACGCCAATATGCTCAACCGTACCCGGAACATGTTAGAAGAAGCTATAAGTGGACGATCAGTAACTTGCCTCATTTGCATAGGATCTATCAAGCGAGTCGACGCGATATGGTCTTGTGGACACTGTCATTGCTATTTCCATTTGTCTTGCATCCAAAAATGGTCCAACGATAGTGTTAATCTGCGTAAAGAACAGAACCATGCTCCAGTTCAAGTAGTTGTACCAAAGAAGATAGAGTGGTGCTGCCCGAAATGCCGCAACTCGTGTAGTAAGGATGAAATACCTCGGCGGTATGTGTGTTTTTGCGGCAAAACCACCGATCCTCCCGTCCATCCGTGGTTGGTGCCACATTCATGTGGGGAAATATGTCAGAAAAGGTTATCCATGGGTAGTAGCTGTATGCATAAGTGTATGCTGCTCTGTCACCCTGGCCCATGCCCTCCGTGTCCTCAAACGCTTACCGCAGCATGTTACTgcaagaaagagaaaaagatggTCCGTTGCAGCAGTTCGCAATGGTCTTGTGGTCAGATATGTGAAGGGATTTTACTCTGTAATTCTCACAAATGTCAATACGAATGTCATGAAGGAGAATGTCCTCCTTGCAGTTACACCAGTACGCAGTCCTGTTACTGCGGCAGCGAGTCATCAAAGAGACCCTGTGCAAATCCCAATTGGCAATGCACCAAatcatgtaacaaaaagtacACTTGCGGGTACCATAAATGTGAAAAGGTATGTCATTCTGGTGACTGTGGAGCCTGTCCCAACTCTGGCTTGAAATTTTGCCCATGTGGTGCTAACAAAAGACACGTGGAATGTCCGGATGTGATGGAAACTTGTTTGGGAACTTGTGGGAAACGACACACTGGCTGCGAACACAATTGTCCTGAAAAGTGCCACAAAGGACCATGCCCTCCTTGCCAAGTGTTAATTCAGAAGAACTGCCAATGCGGTACTCATTCTAGATCTCTACCATGCAGTAAGGAGTACAAGTGCGACACAAAATGCAGGGGCATCAGGCCGTGTGGGAAACATCCTTGTGCACGCAAATGCTGTAATGGAAACTGCCCTCCATGTGAGAAAATTTGTGACAAATCATTGCAATGCAGTAAACACAGATGTACCATGGTCTGTCATCGAGGACCTTGCTACCCTTGTCCGAGGGAGTCAAAAGTCACTTGCAGATGCAAAGAAACATTTATCACAGTTCCATGTGGCAGAGAAAGACAAGTGAAACCCCCAAGATGCAGTCGACCTTGTAAACTGAAATATAAATGTGGACATGTCGAAGAGAACAAACATTCCTGCCATTTCGGCAACTGCCCAATATGCAAAGCTGTCTGTGACAGGGCATACCCTAAGTGCGAACATAGATGCAAGGAGAAGTGTCATGAATACGTAGAAGTGGTGTTCAAACAAGTGGAGAAACCAGCCACCCCATGGGAAGTGCAACCTCCTAAGACGAAGATAATGGCATTAGATTGTCCTCCTTGTGACACACCAGTGACAGTTATTTGTTTTGGCGAGCATGAGACCGAAGAACAGCCTTGTCATTCTGCAAAACGTCGTCCCTGTGGACGTGATTGTGGCCGTCCTTTAGCTTGTGGTAACCACAGCTGCACCTTGGCTTGCCATTTATATAGTCAAGATCCTGAGTATGCAAATGTGCCTTATGTTTGCCGTCCATGTAACAGAGAGTGTGCAGTCCCTCGTCCAGAAAAATGTGCACATAAATGTGCAAAGCGAGCTTGCCATCCTGGTCCTTGCCCGCCATGTGACATTCTAGAAAGAGTTGCCTGTCACTGTGGCGTAACAGAATTATACTTACGTTGTCGGGAACTGTCTACAGCCTCTGAGGAAGTATTGTCATGCAAGCAACAATGCCCAAAGAATCTGGAATGTGGTCATCGTTGCCGTAACAATTGCCACTCGGGTACATGTGGGAATCAAATATGTACGAAGAAGACAAAAGTGTACTGCCCTTGTGGAGGCATGAAAAAAGAAGCACCATGTAATTTAGTCAAGAAAGGCGAAGTAGAAGTTACTTGTGATGTTAGTTGTGAAACTAAGAAAGTTGCTACCCAAAAGGAGAAGGAAAAAGAAGAGCAAAGAAGGAGACAGATGGACGAAGAGAAGAACCGTAAAGAGCTAGAAGAGTATGAATGGAAATTGAGTGGTAAAAAGAAGAAATACAAGGAGAAGAAAGTTGTAATTGCTCAAGATGATAGGAATATTATACAAAAGTACTGGCTTTTAATCTTGTTAATTTCGTTGGGTGTTGCTGGGCTAGCGTACATTGTTGTGAATGTCTAA
Protein Sequence
MARRYQDAAAKLQQSVQRHLKEMKELSSSDEEDDLESSVLDGVFKKYQSGGGDANMLNRTRNMLEEAISGRSVTCLICIGSIKRVDAIWSCGHCHCYFHLSCIQKWSNDSVNLRKEQNHAPVQVVVPKKIEWCCPKCRNSCSKDEIPRRYVCFCGKTTDPPVHPWLVPHSCGEICQKRLSMGSSCMHKCMLLCHPGPCPPCPQTLTAACYCKKEKKMVRCSSSQWSCGQICEGILLCNSHKCQYECHEGECPPCSYTSTQSCYCGSESSKRPCANPNWQCTKSCNKKYTCGYHKCEKVCHSGDCGACPNSGLKFCPCGANKRHVECPDVMETCLGTCGKRHTGCEHNCPEKCHKGPCPPCQVLIQKNCQCGTHSRSLPCSKEYKCDTKCRGIRPCGKHPCARKCCNGNCPPCEKICDKSLQCSKHRCTMVCHRGPCYPCPRESKVTCRCKETFITVPCGRERQVKPPRCSRPCKLKYKCGHVEENKHSCHFGNCPICKAVCDRAYPKCEHRCKEKCHEYVEVVFKQVEKPATPWEVQPPKTKIMALDCPPCDTPVTVICFGEHETEEQPCHSAKRRPCGRDCGRPLACGNHSCTLACHLYSQDPEYANVPYVCRPCNRECAVPRPEKCAHKCAKRACHPGPCPPCDILERVACHCGVTELYLRCRELSTASEEVLSCKQQCPKNLECGHRCRNNCHSGTCGNQICTKKTKVYCPCGGMKKEAPCNLVKKGEVEVTCDVSCETKKVATQKEKEKEEQRRRQMDEEKNRKELEEYEWKLSGKKKKYKEKKVVIAQDDRNIIQKYWLLILLISLGVAGLAYIVVNV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00208487;
90% Identity
iTF_00208487;
80% Identity
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