Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: THAP3_2
Assembly: GCA_905147135.1
Location: LR990065.1:12014560-12036277[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.8 8e+02 1.9 0.3 1 10 385 394 385 398 0.93

2 11 0.0043 0.39 12.3 0.7 1 23 414 437 414 437 0.93

3 11 7.2 6.5e+02 2.1 0.3 1 23 441 463 441 463 0.84

4 11 0.0056 0.51 11.9 1.0 1 23 468 491 468 491 0.98

5 11 0.0059 0.54 11.8 0.7 1 23 495 518 495 518 0.95

6 11 7.8 7.2e+02 2.0 0.1 2 19 531 548 531 551 0.78

7 11 0.043 4 9.1 0.2 2 23 605 627 604 627 0.96

8 11 0.015 1.4 10.6 0.1 3 20 644 661 643 664 0.93

9 11 2.2e-05 0.002 19.5 2.7 1 23 670 692 670 692 0.98

10 11 0.00031 0.029 15.9 2.8 1 23 699 721 699 721 0.98

11 11 0.00025 0.023 16.2 0.7 1 23 727 750 727 750 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.8	8e+02	1.9	0.3	1	10	385	394	385	398	0.93
2	11	0.0043	0.39	12.3	0.7	1	23	414	437	414	437	0.93
3	11	7.2	6.5e+02	2.1	0.3	1	23	441	463	441	463	0.84
4	11	0.0056	0.51	11.9	1.0	1	23	468	491	468	491	0.98
5	11	0.0059	0.54	11.8	0.7	1	23	495	518	495	518	0.95
6	11	7.8	7.2e+02	2.0	0.1	2	19	531	548	531	551	0.78
7	11	0.043	4	9.1	0.2	2	23	605	627	604	627	0.96
8	11	0.015	1.4	10.6	0.1	3	20	644	661	643	664	0.93
9	11	2.2e-05	0.002	19.5	2.7	1	23	670	692	670	692	0.98
10	11	0.00031	0.029	15.9	2.8	1	23	699	721	699	721	0.98
11	11	0.00025	0.023	16.2	0.7	1	23	727	750	727	750	0.92

Sequence Information

Coding Sequence: ATGCGCTGCAGTGTTCCTAGTTGTAACAACGACACCAAAATAACTACTAAAAGTGATGGAATCACATTTCACATGTTCCCGAAGGAAGAGGTGTTGCGTACAGCATGGGTAGAGGCCCTCAGTCTATCAGAGTGGGACCCAAAGGACCGCAGCACCGTCTGCTCTGAACACTTCCGCCATGAAGACTTTTATGAGACAAAGTGTGGACTAAGGAAGATCAAGAGGAGTGCCGTGCCAGATCTAAATCAGgacAATATGGACCTAGATGCACCAGCCACATTAAGAGTGTGCAGAGTCTGTCTGGCCATAGACTCGAAAATGTTTCACATAAAGGACAATCAACTTGAGCAACCATATCTACAAGCCACGGGAGTAACTGTATCACCATCAGATCACCTCCCGCAGTCCGTATGCTTCGAATGCGCCGCGCGGCTGGCCGACTGGCGGCGGTTCAGTGCGAGGGCTTCCACCGCTCAGGGTCTGATGGCCGATGTGGTGGCTAGGGGGGATTACCTAACCATCCGAGACGTGAAGGCCATGACACTAGAACACAAGCATCTCAAGTCTACACTTATAACCAAGTGTTACGAACCGAACGACTATGATATGTGGATGAAGGATAACCAGGTGGTCCTCAAAGCTGATGAGAGACGGCAGGAGGTTGATGAGGATGAGGACCTGAAGGAAGATTGTGATCTCATTAGCAATGATGAGAGTGTACCGATGCCACCAATAATGGAGGTGGAGATAAAGTATGAGCAGCCCAACGACATTTTCTACGAGGAATTCCCCGACAACTTCGAATCGGACGACGACATCAAGCTGAGCGAAGTGCAGAGCGAGAGAGAAGCGAAGAAGAGCGAAGCGAGCGCAGAGAAGCAGACGGTTAAGCGGACTAAGAAGCTGAAGAAGAAAAAGATTAAAGTAGAGAGGAAGAGAGTGGTGAAGGAGAGAGAGAAGAAGGAGCCCAAGCAGGATGAGGATGAGGATCCTAATACTACTATGGATAAGTACAAGAAATCAGACGTGAAGCGTCGGAAAACGCACGACGGACTCGACGAGTCGCTGTTCACCATCACCACGCTCACCTACCAGGAACAGATAGCGGAGGTGGAAAGACGCCAAGAGTCAGCTGCGTACAAGGCGGCGGCCTTCCGGTGTTCAATTTGCTACCGCGGATTCCTCGTCAGAGACCGATACGACGCGCACTGCGTACGGCATAGCGAGGCGAGCGGTGCGTACGAATGCTTCATCTGCAAGACCCGTCTGAAGTCTGCGCGTGCGCTGCGGAAGCACCTCACCGCGCAGCACACCGAGCAGTTCAGCTGCAAGGGCTGCCCCTTCCTCACTAGGAACCGGGGCGTGGCACGGGAGCATGAGAAATGGCACGCGGGAACCAAGTACCAGTGCCCGCACTGCCCCAGCGAGTTCGACAAACTAACGACGTACATGGGCCACATCCGCATAAAGCACGTGTCGGCGTTCGTGTGCGAGCTGTGCGGGTACACGTTCGTCAGCCGGAAGGGGATCGACGTGCACAAGAAGAAGAAGCACCGCCTCGTCGATAAGGCGGTGACACTGGAAGGCCCGTACTGCGAATTGTGCGACGTGAGATTCATATCAGAAGAGGCCCACGACAGGCATCTCAAGCTGTCCTCCAAACACAGCAGTGATAATGACCCCAACCGCATCCGAAACGACTCGCAAAGCATGCACGCGGACCGCGGGAACCGGAACGGACGACGCTCGGAGAGAAGACTAGCTATCCACGACAGGGACGGAGTTAGTGTGGAGAGGAGCAGCGGCCCTGTCACTTGCGAGCAGTGCGGCGTGTCTCTCCGCGACTTACGGCTCTACGCGCAACACTTCCGGCGCGCGCACCCGGATAAGAACCGGACCAAGTACCCGGCCATGAAGACGCCGGCTATGTGCGAGCAGTGCGGACGGATATTCCAGAGCATGGCCCTTCTAAAAGACCACATGTGGGTGCACACCGGCGAGAAGAGATTCAAATGCGAGCGCTGCGATAAGTCCTTCACGCAGAAGACTAACCTGGTATTCCATCAGAGAGTGCATTCGGCTACCAGACCGACTTACGAGTGTCCACTCTGTGGGAAGCACTTTGCGTTCTTCAATAATCGGCGGAGGCATATGTTTATCCACACTGGTCTGAAGCCGTTCAAGTGCGAGTCGTGCGGGAAGACGTTCACGACGGCGGGCGAGCAGCGGGCACACGTTGACCACGTGCATCTCAAGAAGCCGTGGCCTAAGAGAGCCCGCGCCCAGAGACAATCTCTGTCCTCCCAACCAATGGACGCTTGGCAGAAATGCCCGGCGCCTCCGCTGGAGGACTGA
Protein Sequence: MRCSVPSCNNDTKITTKSDGITFHMFPKEEVLRTAWVEALSLSEWDPKDRSTVCSEHFRHEDFYETKCGLRKIKRSAVPDLNQDNMDLDAPATLRVCRVCLAIDSKMFHIKDNQLEQPYLQATGVTVSPSDHLPQSVCFECAARLADWRRFSARASTAQGLMADVVARGDYLTIRDVKAMTLEHKHLKSTLITKCYEPNDYDMWMKDNQVVLKADERRQEVDEDEDLKEDCDLISNDESVPMPPIMEVEIKYEQPNDIFYEEFPDNFESDDDIKLSEVQSEREAKKSEASAEKQTVKRTKKLKKKKIKVERKRVVKEREKKEPKQDEDEDPNTTMDKYKKSDVKRRKTHDGLDESLFTITTLTYQEQIAEVERRQESAAYKAAAFRCSICYRGFLVRDRYDAHCVRHSEASGAYECFICKTRLKSARALRKHLTAQHTEQFSCKGCPFLTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSAFVCELCGYTFVSRKGIDVHKKKKHRLVDKAVTLEGPYCELCDVRFISEEAHDRHLKLSSKHSSDNDPNRIRNDSQSMHADRGNRNGRRSERRLAIHDRDGVSVERSSGPVTCEQCGVSLRDLRLYAQHFRRAHPDKNRTKYPAMKTPAMCEQCGRIFQSMALLKDHMWVHTGEKRFKCERCDKSFTQKTNLVFHQRVHSATRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCESCGKTFTTAGEQRAHVDHVHLKKPWPKRARAQRQSLSSQPMDAWQKCPAPPLED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208297;
90% Identity: iTF_00208297;
80% Identity: iTF_00208946;