Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: ZFAT
Assembly: GCA_905147135.1
Location: LR990041.1:5079730-5087291[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.7 5.2e+02 2.4 3.6 2 12 186 196 185 209 0.68

2 11 0.31 29 6.4 0.9 3 23 215 235 214 235 0.96

3 11 2.6 2.4e+02 3.5 2.4 2 17 242 257 242 264 0.70

4 11 0.069 6.3 8.5 0.6 2 20 273 291 272 291 0.95

5 11 4e-05 0.0037 18.7 0.6 1 23 300 323 300 323 0.97

6 11 0.0042 0.39 12.3 1.7 1 23 329 352 329 352 0.97

7 11 0.23 21 6.9 3.0 2 21 358 377 357 378 0.91

8 11 0.0027 0.25 12.9 1.9 2 23 382 403 381 403 0.96

9 11 0.00049 0.045 15.2 0.2 1 23 409 432 409 432 0.92

10 11 5.7e-06 0.00052 21.3 0.9 1 23 438 460 438 460 0.99

11 11 1.7e-07 1.5e-05 26.2 0.8 1 23 466 488 466 488 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.7	5.2e+02	2.4	3.6	2	12	186	196	185	209	0.68
2	11	0.31	29	6.4	0.9	3	23	215	235	214	235	0.96
3	11	2.6	2.4e+02	3.5	2.4	2	17	242	257	242	264	0.70
4	11	0.069	6.3	8.5	0.6	2	20	273	291	272	291	0.95
5	11	4e-05	0.0037	18.7	0.6	1	23	300	323	300	323	0.97
6	11	0.0042	0.39	12.3	1.7	1	23	329	352	329	352	0.97
7	11	0.23	21	6.9	3.0	2	21	358	377	357	378	0.91
8	11	0.0027	0.25	12.9	1.9	2	23	382	403	381	403	0.96
9	11	0.00049	0.045	15.2	0.2	1	23	409	432	409	432	0.92
10	11	5.7e-06	0.00052	21.3	0.9	1	23	438	460	438	460	0.99
11	11	1.7e-07	1.5e-05	26.2	0.8	1	23	466	488	466	488	0.98

Sequence Information

Coding Sequence: ATGGATGTTTGTAGAGCTTGTCTATGTAGCGACACACGCGAGTTATTGGTAGCACTGGACGAATCCCTTATTGTAAGCTACAATTTACTTACAAATTTAAATGTGGCCCTGTTAGACGGACTATCACAAATGATATGCCAAACGTGTTTGAGTATGATAAATTTATTCGTCGAGTTTAGGAAGAAATCTGTCATAGCAGAGTTGAAGTTGAGGACACAAATTGATGAGCAAGTAAAAGTGGAGGTGACCATTCCAAAAGAATCTAGAGAATTTGAGAAATGttcaaatatattaaaacaagGTGTAATTATTAAAcctgaaataaagaaagagATCCTAGATGAAGAGTTTCTGGATGAGACCATTtttgatgatgaaataattcatgGCTATGATTTTGGAGACTTAGAACCACTTATCAATAATCTTAATGTGGAAGGAATTAAGAAAGATCAAACATCAAAAAAGAAACGCAAGCCTAGAAGAACTAAACAATCTAAAGAGCCTATCCTATCATTTGGAAAATCTAATCTTACTAATGATAGTTCCCTGTTGACATGTGGTCTTTGCAAAAAGACGTTCAATAAGGATGAAAAAGAGGCGTTACAAATGCATCTAGAATCCCACAAGGATGATGCTCACTGCCAGCTTTGTCAAGAGCTCTTCACCTCTTGGCCAGATATAGTGTCCCATAGATTTACCCATCTGGAAAGTGCGGCCCGAAGGTGCCACATTTGCTCAAAGAGATTTCTGAAACCACAGTATTACGAATTTCACTTCAGGAAAATACACTGTAAAGAAGAAAATATTCAAATGACTTGCAAGGTCTGTGGCAATAATTATCCGTCGCCAAGGAGGCTGCAGAAACATCATTGGTGGAGTCACTCTGAGAAACGTTATATGTGCGATTTCTGCTCGAAGGAGTTCACTACCAAAGGACGTCTCGCAGCCCATATTAAGATTAAACACAGCGACGTCAAAACATTTTCTTGCCCCTCGTGCGAGTATTCCTGCAAGCTGAGTATCAACCTGAAAGACCACATTATAAGGAAACACACAGCAACGAAGTTGTACTGCAAACTGTGCACTCGCGTGTTCATGGACCAGGAGAAATTCGATAAGCACAAGTGCAAGGGACAGTGCATTTGCCCCGTGTGCGGTGAAACGATTCCGAGCGGTaaaaagCTCCATCGGCACATGAAGAAACACAGTGCCGAGAAGCCATACCGCTGCACACTATGCGACGCCGCCTACCGCACGCGGCAGAACCTCGCCGTACATCGTGACGCGAAGCACGGCGGCGAGCGACGCTACCGCTGCCAGTACTGCCCCAGAGCATTCTACTCACCAAACGTGTTGATAAAGCACCGACGGACACATACCGGGGAGAAGCCATACGTATGCCCAGAGTGCCACAAAGGGTTCACCGGCAACAACAACTTAAAAGTCCACATGAAGGTGCATGGAATACATAACTTGATAGTAAAGAGGGTTAAACCTGAAGAGGAAGCAtaa
Protein Sequence: MDVCRACLCSDTRELLVALDESLIVSYNLLTNLNVALLDGLSQMICQTCLSMINLFVEFRKKSVIAELKLRTQIDEQVKVEVTIPKESREFEKCSNILKQGVIIKPEIKKEILDEEFLDETIFDDEIIHGYDFGDLEPLINNLNVEGIKKDQTSKKKRKPRRTKQSKEPILSFGKSNLTNDSSLLTCGLCKKTFNKDEKEALQMHLESHKDDAHCQLCQELFTSWPDIVSHRFTHLESAARRCHICSKRFLKPQYYEFHFRKIHCKEENIQMTCKVCGNNYPSPRRLQKHHWWSHSEKRYMCDFCSKEFTTKGRLAAHIKIKHSDVKTFSCPSCEYSCKLSINLKDHIIRKHTATKLYCKLCTRVFMDQEKFDKHKCKGQCICPVCGETIPSGKKLHRHMKKHSAEKPYRCTLCDAAYRTRQNLAVHRDAKHGGERRYRCQYCPRAFYSPNVLIKHRRTHTGEKPYVCPECHKGFTGNNNLKVHMKVHGIHNLIVKRVKPEEEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208269;
90% Identity: iTF_00208269;
80% Identity: -