Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: -
Assembly: GCA_905147135.1
Location: LR990045.1:4513438-4522835[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.27 25 6.6 0.1 3 23 124 144 122 144 0.96

2 17 0.015 1.4 10.5 0.1 2 23 148 170 147 170 0.96

3 17 0.0081 0.74 11.4 0.5 1 20 427 446 427 447 0.95

4 17 4.2 3.8e+02 2.9 0.2 1 10 495 504 495 518 0.72

5 17 0.038 3.4 9.3 0.9 1 23 527 552 527 552 0.94

6 17 4.8 4.4e+02 2.7 2.0 2 23 564 585 563 586 0.94

7 17 2.5 2.3e+02 3.6 0.3 2 11 628 637 627 648 0.88

8 17 1.7 1.5e+02 4.1 1.2 1 23 655 678 655 678 0.95

9 17 9.4e-06 0.00086 20.7 1.3 1 23 684 706 684 706 0.97

10 17 2.8e-05 0.0026 19.1 1.7 1 23 713 735 713 735 0.98

11 17 0.00011 0.01 17.3 2.3 1 23 740 762 740 762 0.96

12 17 0.00045 0.041 15.4 2.8 1 23 768 790 768 790 0.98

13 17 2.3e-06 0.00021 22.6 1.4 1 23 796 818 796 818 0.98

14 17 0.00068 0.062 14.8 2.5 2 23 825 846 825 846 0.98

15 17 7.4e-05 0.0067 17.8 0.3 2 23 855 877 854 877 0.97

16 17 0.34 31 6.3 0.1 2 23 882 905 881 905 0.92

17 17 0.054 4.9 8.8 4.2 1 23 919 942 919 942 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.27	25	6.6	0.1	3	23	124	144	122	144	0.96
2	17	0.015	1.4	10.5	0.1	2	23	148	170	147	170	0.96
3	17	0.0081	0.74	11.4	0.5	1	20	427	446	427	447	0.95
4	17	4.2	3.8e+02	2.9	0.2	1	10	495	504	495	518	0.72
5	17	0.038	3.4	9.3	0.9	1	23	527	552	527	552	0.94
6	17	4.8	4.4e+02	2.7	2.0	2	23	564	585	563	586	0.94
7	17	2.5	2.3e+02	3.6	0.3	2	11	628	637	627	648	0.88
8	17	1.7	1.5e+02	4.1	1.2	1	23	655	678	655	678	0.95
9	17	9.4e-06	0.00086	20.7	1.3	1	23	684	706	684	706	0.97
10	17	2.8e-05	0.0026	19.1	1.7	1	23	713	735	713	735	0.98
11	17	0.00011	0.01	17.3	2.3	1	23	740	762	740	762	0.96
12	17	0.00045	0.041	15.4	2.8	1	23	768	790	768	790	0.98
13	17	2.3e-06	0.00021	22.6	1.4	1	23	796	818	796	818	0.98
14	17	0.00068	0.062	14.8	2.5	2	23	825	846	825	846	0.98
15	17	7.4e-05	0.0067	17.8	0.3	2	23	855	877	854	877	0.97
16	17	0.34	31	6.3	0.1	2	23	882	905	881	905	0.92
17	17	0.054	4.9	8.8	4.2	1	23	919	942	919	942	0.98

Sequence Information

Coding Sequence: atGCATTCAGATGAATCTGACGATGAACCCCTAGCTCTATTAGCGGCCGCTAAAAAGTTAAATCCCGAAAAATATGCCATAAAACCTGTGTCTGAACCCCAACAAGATTTTGTTTATGAACCGAAAAAGCGGAGACGAAAATCGTCGGCTATACAAGAATCTCCATATAAAAAGCTGCCTGTAACATTTAACCTTAGTCGAAACGCTGATAGTGCCATACCTGCAACTGTTCAACGGCCGAACGACGTCTGGCTCTACTTGAAAGACTTCAACCCAAGTGGACCTTACGCCTGTTTGCTTTGCTCCGAGTGGTTCATAAATAGAGCCAAGATAGTTCTTCATTATGTGTTGAACCATCAAAAGGACTTTTGTGGCATATGCAGatattttgtaccAGATAGAACGGCTTGGCAAGCCCACATGAATTTCCATCTACCTTGGCCATGTTCCCAATGCGTGGAAAACTTTGGCACTATTAGTGAGTTGCGGAGTCATCTGAGCACCGTCCACAAGTTGGTGCATTGCAGGCTCTGCCACTTCAGAGTGCCCGATGGTGAACAATACAACGTACATCTCTTTCAAAAGCATAATGTAACCAAAGTAGCCAGCAAGGACGAAGAAATATTATGGGAAGTAGAATCTGAGACCAGCACTACATTTTTCTGCTTGCTCTGTTCTAAATCTGATAACCCTTCTGTTACATACTTCAACCACTATATGGGTTATCATCATTTCACTTTGAAGTGTTTTTCTAGTATTGTATCAGGTAGAGATGTCCCATTCTCTGTGTTTGGTGCAGATCTCACTGAAGACTTTATGGTTACTCTCAAGGGAAAGAAGCTTGGATATGTTGATTTAGATCAGAATAAACCTGAGCTGGAACCTAGCAAGTCTGTTGAAAATGATTTCTCATCAGCACAGGTACTTACAGTAAAATTAGAGCCCCTCAGTGATACTGAGGATATAAAATCAGAGGAAAGTGATGTTCCATCGAGGACTCTGAGTGAGCTAGTGAGAAGTTATAGAGGTGACGATGACTTTGACGTAACCTTAATGGAGTTGATTGTAATACAGAGGTGCTACTTTGATTATATAGACCAGGCACTAAATGAAATAAAGTCAAGTCATGTACCTGAAATCTCTGGCATAGATTATGAATCAGCTAAGTCGGATATTATAATGGACGTGGATTGTTCTCTGTGCaaaatgaaactccatactgTGGAGTCGTTTATGATACACATGCATAGGATGCATAGTGTGAAGTCTGTACCAATATTTTCCTGTAGAGTATGTGCAACAACTTTCAACAGTCAACACGAGCTGAATAATCATGTGGTTGAAGAGCTGGGCGACTTTGAAAACTTATGGCTTTGCCAGTTTTGTGACAAAGAGTTTGATGACAGAATAGCATCAAGGTGTCATTTAACAGAGCACTTCAGTGTGCTAGAGTATGATAACTGTTTCAGTCCCCACTTGGGGTTTAAGTGTAAATACTGTCCGATGCTGTTTTGGAATGAGACAGACAGGGAATTGCACCTAGTGAACGTACACTATAGTAAATATAGAGAACACTACTACAAATGTGAAACCGAAAATTGCTCGGAAGTATTTAGCGATAAGATTTGGTTAGTGTATCACCATGTGAAGCAACATGCAAAGGAGgacaaaagagatatgtattTGGTAAAATGCTGCATCTGCTCTCTGGTGTTGCCCAGTGTGGAAGAAATGAGAACTCACTTCTCAACTCACCATCCTGAGGCCAGAAAAGTGTTCTGTTCTCTAGATGAATGCAAGTACAGGCCGCTCTGTCATAAGAAATCTTTCCAATTGCATTTGCGGTCCCAGCACTGCGGCCCCACCCGCGGCCCCCGCTCGCAGTGCACGGTGTGCGGCCGCGAGTTCGGCTCGGTGCGCGCGTGCGCCGCCCACTCTGCGCACGCGCACGGCCCGGGACGGTTCCGCTGCAAACTGTGCGAGGTCACGCTGCATTCTAGTGATGAGAGGAAACTGCACTACCTGATCGTGCACCCCGGCCACCACCCTTTCGAGTGCAGCGACTGTGGGAAGTCCTTCCAGTACAAGTCCTCGCTCTACATCCACCGGCAGGAGCACGCGCTCAACAAACAGACCTTCACCTGCGAGTACTGCCAGAAGGTGTTCAATAAAAAGGACTCGTACCGCGAGCACGTGCAAATCCATACGGGCCCGCGGCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCGAACATGCTGCGGCACGAACGCCGGCACACGGGCGAGCGGCCCTACGCCTGCCCGCACTGCCAGCGCCGGTTCGCCGACAAGGGGGCGTGCACCTCGCACATTAGGACTCACACGAGGGAAACAACATACGCATGCTTATATTGCGGTCAGACGTTCGTCCAGAAGTCCAAGCTGACCTATCACATCAGGAAACATACTGGGGAAAATCTGGAGACTTGTCCCATATGCTCGAAACTGTTCACGAGTGGTTGCTCGCTCCGGGAGCATATGAAAACGCACAAAGAAAAGAAGTATGAGGGAGTGCAGTGTCCTCTTTGTGACCGCAAATACTCGGACGAGCGCTCCATGCTCCGGCACCTCCGCACGGCGCACAGCCCCGGGCTGCGCTGCCCGCTGCCCGCGTGCCGGAAGCCGCTCGCCTCGCCCGTCGGACTCCGCCACCACGTGCTGACGCACAGCCCGCTCAACGTCTACCGGGTATGCCCGCTCAACGTCTACCGGTGCAAATGCTGTCCGAAATCCTACGCAGTACGTCGCACCATGATCAGGCACCTGCGCAAGCGGCACGACCTCAAATCCGGCGAAGTGGAGATTAAGAGCTTCTACAGGAAACTGGAACCCAGCGAATGTGAATTAGGCCTCGACGAAGAAACCATGAAGGCGATATTCGGGAAGCCGAAGAAGAAAGCCACTAACGTGGTGACATTGATACCCGATATTATCACTGTGCCCAAGGAGAATGTTGCCAGAATGGTAAAGAAAGTCCCCAAAAAGCGAGAAGAGGAGAGCGAAGAAGAGAATGAGAATGAGAGTGAGGGCAGTGAGGAGGAGAACCAGCCTGAAGATGACGACGCTGACGGTGGGGACAACGATACAGCCACTGATATGCAATCTGTTCTTGAACCGACAGATTTTGTAAGCGTTAAGATTGAACCGTTGGACCCAGACGAATTAGAGAATGAATAA
Protein Sequence: MHSDESDDEPLALLAAAKKLNPEKYAIKPVSEPQQDFVYEPKKRRRKSSAIQESPYKKLPVTFNLSRNADSAIPATVQRPNDVWLYLKDFNPSGPYACLLCSEWFINRAKIVLHYVLNHQKDFCGICRYFVPDRTAWQAHMNFHLPWPCSQCVENFGTISELRSHLSTVHKLVHCRLCHFRVPDGEQYNVHLFQKHNVTKVASKDEEILWEVESETSTTFFCLLCSKSDNPSVTYFNHYMGYHHFTLKCFSSIVSGRDVPFSVFGADLTEDFMVTLKGKKLGYVDLDQNKPELEPSKSVENDFSSAQVLTVKLEPLSDTEDIKSEESDVPSRTLSELVRSYRGDDDFDVTLMELIVIQRCYFDYIDQALNEIKSSHVPEISGIDYESAKSDIIMDVDCSLCKMKLHTVESFMIHMHRMHSVKSVPIFSCRVCATTFNSQHELNNHVVEELGDFENLWLCQFCDKEFDDRIASRCHLTEHFSVLEYDNCFSPHLGFKCKYCPMLFWNETDRELHLVNVHYSKYREHYYKCETENCSEVFSDKIWLVYHHVKQHAKEDKRDMYLVKCCICSLVLPSVEEMRTHFSTHHPEARKVFCSLDECKYRPLCHKKSFQLHLRSQHCGPTRGPRSQCTVCGREFGSVRACAAHSAHAHGPGRFRCKLCEVTLHSSDERKLHYLIVHPGHHPFECSDCGKSFQYKSSLYIHRQEHALNKQTFTCEYCQKVFNKKDSYREHVQIHTGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCQRRFADKGACTSHIRTHTRETTYACLYCGQTFVQKSKLTYHIRKHTGENLETCPICSKLFTSGCSLREHMKTHKEKKYEGVQCPLCDRKYSDERSMLRHLRTAHSPGLRCPLPACRKPLASPVGLRHHVLTHSPLNVYRVCPLNVYRCKCCPKSYAVRRTMIRHLRKRHDLKSGEVEIKSFYRKLEPSECELGLDEETMKAIFGKPKKKATNVVTLIPDIITVPKENVARMVKKVPKKREEESEEENENESEGSEEENQPEDDDADGGDNDTATDMQSVLEPTDFVSVKIEPLDPDELENE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00208237;
90% Identity: iTF_00208237;
80% Identity: -