Blac030424.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- -
- Assembly
- GCA_905147135.1
- Location
- LR990064.1:2126752-2156358[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.017 1.5 10.4 0.1 3 23 475 495 474 495 0.95 2 25 0.00025 0.023 16.2 1.8 1 23 515 537 515 537 0.98 3 25 0.00034 0.031 15.8 1.4 1 23 543 565 543 565 0.97 4 25 5.8e-05 0.0053 18.2 2.3 1 23 572 594 572 594 0.99 5 25 9.8e-05 0.0089 17.5 0.3 1 23 600 622 600 622 0.93 6 25 3.4e-07 3.1e-05 25.2 0.2 1 23 628 650 628 650 0.98 7 25 3.7e-06 0.00034 21.9 1.1 1 23 656 679 656 679 0.96 8 25 3.1 2.8e+02 3.3 0.6 3 13 687 699 685 701 0.87 9 25 3.1 2.8e+02 3.3 0.6 3 13 799 811 797 813 0.87 10 25 3.1 2.8e+02 3.3 0.6 3 13 911 923 909 925 0.87 11 25 3.1 2.8e+02 3.3 0.6 3 13 1023 1035 1021 1037 0.87 12 25 3.1 2.8e+02 3.3 0.6 3 13 1135 1147 1133 1149 0.87 13 25 3.1 2.8e+02 3.3 0.6 3 13 1247 1259 1245 1261 0.87 14 25 3.1 2.8e+02 3.3 0.6 3 13 1359 1371 1357 1373 0.87 15 25 3.1 2.8e+02 3.3 0.6 3 13 1471 1483 1469 1485 0.87 16 25 3.1 2.8e+02 3.3 0.6 3 13 1583 1595 1581 1597 0.87 17 25 3.1 2.8e+02 3.3 0.6 3 13 1695 1707 1693 1709 0.87 18 25 3.1 2.8e+02 3.3 0.6 3 13 1807 1819 1805 1821 0.87 19 25 3.1 2.8e+02 3.3 0.6 3 13 1919 1931 1917 1933 0.87 20 25 4.3 3.9e+02 2.8 0.6 3 13 2031 2043 2029 2044 0.88 21 25 0.75 69 5.2 0.9 3 19 2063 2081 2061 2083 0.88 22 25 0.001 0.091 14.3 0.6 3 23 2092 2115 2090 2115 0.93 23 25 0.0011 0.1 14.2 0.7 2 23 2122 2143 2121 2143 0.97 24 25 9.1e-05 0.0083 17.5 1.1 1 23 2149 2171 2149 2171 0.97 25 25 0.14 13 7.5 0.0 1 21 2177 2197 2177 2201 0.92
Sequence Information
- Coding Sequence
- ATGAATGAAACATGTTTCATTTGCAGTAATCCAGTCAGACAATCTGACAAGGACcaatatGCAAGCCAGGAGCATGAATTGGCATCATTGGTCGGTGATATTCTGGAAACGGGTGTTGGTGCTGAACAGTTGCTGTTATGTAAAAATTGCATTAGCACCTGCGTTGAGTATGATGCCGTACATACAAAATTACAAGCATTAAAAGCAGTTATAGTGGCTCAATACAAAGCATCCCAAATTCAGAAACGTGATGCAGTAACTTGGGTATTGAGTAGCCCAGTGAATACACTCACTCAGACCAAAGTCACTCCTACTAAGAGAGTTGTATTACCAGCGTCAAAACTGCAACCTTTGCCACCAAACTATGTCATCAATGTTAGCAACCTAGCTTCCAGTCTTGGCAACAAGTTGGTTGTACCAAAAATTACTacCAGAACCATCCAGTCCTCCGAAGGATTGAAACTTTCTGTGGGATCCGTAGTCCCTACACAATACATCACAACAACGTCTACGAGCAAAAATGGGAATCTGATACAGCAAGCGTTGAGTCTCCAAAGTGCACCGATAAATTTGCTGTCCGCAGCGAACACTATTACAGTAACCAGTGCTGTCAAGACTGTAGCGAGTGAATTGTCACCGTCAAGTACAGTTTCTGCACCTACAGTGATGGCATCCATCAGTACAAGGACAACCGATGCGCTGAGCTTAAACATGAGTACACTTCCTAAGGATTTCCTCGACAGTGATGATAAATCTTATATGAAGAAAGAAATGGATGAGGAAAACAATGATGAATTGCCAATGGAGATTGATGAAGATTGCACATTGCGCATCACAAAAGAGACTGATCCTATTGAAAAATGTGATGATAAGGCTTCCGAATCGGACGGCGATGAAGGGAAAGACAGTGAATACTACGAAGTATCTGACGGCGTGTTCCAAGTGCTGGCTGGGGACGATGAGGACGATGAGCAAGCGATAGTGATGTCCGGCGAGAACGGATCCATACTGCGCGTGGTGGCCGGACAGAAGCTGGTGTACGAGCAGATCGCCATCGTGGCTGACCAgggcgacggcgacggcgacgacgacgacgatggCGATAACGATTCGAACGACGAGTCGCAAATAGAGTTGCAAGTGTCAGGCGACGAGGAGACCGCCAACGCTATCATTGCGGCCGCGCAGGAACAAGGCGGAGCATTCATAAAAGTAGAATCGGGAGAAATGTTCCGAGTCAAATCGGTGCAGAGTAAGAAGCAAGTTGCACTAGACGAGTCACAAGAAGTAATAGAAAAAGTGGGCGACAACCAGTATAAGTGTCTATTGTGCGAGGACAATGATAAAAACGAGCCCACGGAATACACATCCACTGCAGCGGTGGAGCACGCCCGGTCCGTCCACGCGGCGGCGGCTCGCGTGTGCGCCGCGTGCGGGTTCGTGACCGCCAGGAAACAGGACTTGGCCGAGCATATGCAGACGCACGCCACGGAAAGGGGCGCCGGGAAGAGTAAACAGATAGTCATAGACAAGAGAACGGTTCACGAGTGCAACGTATGCAACAAGAGATACAACTCCCGCACGCTGCTAGCAGAGCACCTGAATACGCACTCTGGCGCGCGGCCGCACCGCTGCCTGGCGTGCGGGAAGGCCTTCGCGTCCAAGTACACCTATCAGGCGCACGTCAAGACGCATCTGGACCGACCTCGCCCCTTCAAGTGCAATCAGTGTCCGAAGTCATTCCTCACGCAACAGAACTTGACCCAACACGAGAGAACGCATTTGGGAATTAAGGATTTCAAGTGCAATGTTTGTGGCAAAGCGTTCGGCACCCAACACAATCTAGACGTCCACGGTGTTGTGCATTCCGGGGAACGACCCTTCGTTTGCAACCAGTGCGGAAAGGGATTCGCCAGACGGGCAGAGCTGAAGGACCATATACGGACGCATACAGGCGAGCGTCCTTTCCAATGCCCGGACTGCGGCGCCCGCTTCGCCCAACGAAGCAACCTGCACTCACACCGGCGCGCCACGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGTATGGCACACACTGGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGCGATGCagatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGatacacacacacccacgccaCGCACCTCGCCGACCGCCGCTACGGCTGCCCGCAGCAGGGCTGCGACAAGCGGTTCAAGAGACGGAGGCTACTGGAATACCACATAAAGGCGTTCCACACGGGCGAGCGTCCGCTGCAGTGCGGCGTGTGCCGCGCGACCTTCGTGTATCCGGAGCACTACAAGAAGCACGTGCGGATACACAGCGGGGAGCGGCCCTTCGTGTGCGAGGTGTGCGGCAAATCCTTCAACTCGCGCGACAACCGCAACACTCACCGTTTCGTCCACAGCGACAAAAAACCCTACGAGTGCCTCGTCTGCGGCGCGGGCTACATGCGGAAGGCGCCGCTCTACGCGCACATGAACGCCTCGGGTCACTTAGCGGAATCAATAGTAGTGAACCAACCGAGAGTTCAAAAGGTCGCCGAAAGTGTCATCACAACGCAACCCTCAACAACAATAGAATTTAAAACGAACAAGTTAGACACGATATTTGAGACAACACAAGACATGGAGTCAAACGGGTCGTCTGACGTCAAATCAATTAccaaatcAACGATAAGTCTCGTCCAACCCGATGACGGGACTCTGCTTGCGTTGCcgAATATCGACACGAGCGCGCTACTGCAAGGCTTGACAGTGGCTCCGTTGACGGATCAAGCGCAGATCCTAGCCAGCACAGAAGACGGGAGTGTGATGAAGTTAGTTCAAATACAACTCGACAACGGAGGCACGGGATGGGTGGCCGTCGAATGA
- Protein Sequence
- MNETCFICSNPVRQSDKDQYASQEHELASLVGDILETGVGAEQLLLCKNCISTCVEYDAVHTKLQALKAVIVAQYKASQIQKRDAVTWVLSSPVNTLTQTKVTPTKRVVLPASKLQPLPPNYVINVSNLASSLGNKLVVPKITTRTIQSSEGLKLSVGSVVPTQYITTTSTSKNGNLIQQALSLQSAPINLLSAANTITVTSAVKTVASELSPSSTVSAPTVMASISTRTTDALSLNMSTLPKDFLDSDDKSYMKKEMDEENNDELPMEIDEDCTLRITKETDPIEKCDDKASESDGDEGKDSEYYEVSDGVFQVLAGDDEDDEQAIVMSGENGSILRVVAGQKLVYEQIAIVADQGDGDGDDDDDGDNDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVQSKKQVALDESQEVIEKVGDNQYKCLLCEDNDKNEPTEYTSTAAVEHARSVHAAAARVCAACGFVTARKQDLAEHMQTHATERGAGKSKQIVIDKRTVHECNVCNKRYNSRTLLAEHLNTHSGARPHRCLACGKAFASKYTYQAHVKTHLDRPRPFKCNQCPKSFLTQQNLTQHERTHLGIKDFKCNVCGKAFGTQHNLDVHGVVHSGERPFVCNQCGKGFARRAELKDHIRTHTGERPFQCPDCGARFAQRSNLHSHRRATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYGTHWAMQIHTHPRHAPRRPPLRLPAAGLRQAVQETEVWHTLGDADTHTPTPRTSPTAATAARSRAATSGSRDGGMAHTGRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRRCRYTHTHATHLADRRYGCPQQGCDKRFKRRRYTHTHATHLADRRYGCPQQGCDKRFKRRRLLEYHIKAFHTGERPLQCGVCRATFVYPEHYKKHVRIHSGERPFVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKAPLYAHMNASGHLAESIVVNQPRVQKVAESVITTQPSTTIEFKTNKLDTIFETTQDMESNGSSDVKSITKSTISLVQPDDGTLLALPNIDTSALLQGLTVAPLTDQAQILASTEDGSVMKLVQIQLDNGGTGWVAVE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -