Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: L
Assembly: GCA_905147135.1
Location: LR990049.1:11384565-11414079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.9e-06 0.00017 22.8 1.7 1 23 86 108 86 108 0.99

2 18 0.81 73 5.1 5.8 1 23 114 136 114 136 0.97

3 18 9.3e-06 0.00085 20.7 5.2 1 23 142 164 142 164 0.99

4 18 3.3e-05 0.003 18.9 0.1 1 23 170 192 170 192 0.98

5 18 0.0022 0.2 13.2 0.1 2 23 207 229 206 229 0.94

6 18 3.9 3.6e+02 3.0 0.3 3 23 253 275 251 275 0.79

7 18 0.39 35 6.1 0.0 3 23 340 360 339 360 0.97

8 18 0.18 16 7.2 0.0 2 23 374 395 373 395 0.91

9 18 0.00027 0.024 16.1 0.6 1 23 403 426 403 426 0.94

10 18 0.042 3.8 9.2 0.1 1 23 431 454 431 454 0.92

11 18 0.0013 0.12 13.9 0.3 1 23 508 532 508 533 0.95

12 18 0.00025 0.023 16.2 0.1 2 23 591 612 590 612 0.96

13 18 0.074 6.8 8.4 0.0 1 23 620 642 620 642 0.97

14 18 1.7 1.6e+02 4.1 0.7 2 23 650 671 649 672 0.93

15 18 7.8 7.1e+02 2.0 0.1 3 23 679 699 678 699 0.94

16 18 1.1 1e+02 4.7 0.3 1 23 759 781 759 781 0.94

17 18 0.0045 0.41 12.2 0.1 1 20 789 808 789 811 0.95

18 18 0.13 12 7.6 0.3 1 23 818 840 818 840 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.9e-06	0.00017	22.8	1.7	1	23	86	108	86	108	0.99
2	18	0.81	73	5.1	5.8	1	23	114	136	114	136	0.97
3	18	9.3e-06	0.00085	20.7	5.2	1	23	142	164	142	164	0.99
4	18	3.3e-05	0.003	18.9	0.1	1	23	170	192	170	192	0.98
5	18	0.0022	0.2	13.2	0.1	2	23	207	229	206	229	0.94
6	18	3.9	3.6e+02	3.0	0.3	3	23	253	275	251	275	0.79
7	18	0.39	35	6.1	0.0	3	23	340	360	339	360	0.97
8	18	0.18	16	7.2	0.0	2	23	374	395	373	395	0.91
9	18	0.00027	0.024	16.1	0.6	1	23	403	426	403	426	0.94
10	18	0.042	3.8	9.2	0.1	1	23	431	454	431	454	0.92
11	18	0.0013	0.12	13.9	0.3	1	23	508	532	508	533	0.95
12	18	0.00025	0.023	16.2	0.1	2	23	591	612	590	612	0.96
13	18	0.074	6.8	8.4	0.0	1	23	620	642	620	642	0.97
14	18	1.7	1.6e+02	4.1	0.7	2	23	650	671	649	672	0.93
15	18	7.8	7.1e+02	2.0	0.1	3	23	679	699	678	699	0.94
16	18	1.1	1e+02	4.7	0.3	1	23	759	781	759	781	0.94
17	18	0.0045	0.41	12.2	0.1	1	20	789	808	789	811	0.95
18	18	0.13	12	7.6	0.3	1	23	818	840	818	840	0.94

Sequence Information

Coding Sequence: ATGATCATGCTATTCAAGGGGAACAGCAGCCGGCTGGAGCACCTCATAGAGAAGATACAGGCGAACAAGGAGAACCACGACGTCACCTCGGAGGAGCTGAAAGAGGCCCTGGGCAGCGTGGGCAGCACAGCGGGCAGCTCGTGGCCCTCGTCGACGCCCGAGCCGTCGCCCTCGCCCGCCTCCACGCCGACGTCCGCCGACGCCGCCGAGGACCCCGAGGCCTCGTTCACGCTCGGGGCCACCGAGCACACGCCCTACCAGTGCCAGTTCTGCGACAAGGCCTTCCCGAGACTCTCCTATCTCAAGAAACATGAGCAGACGCACTCGGATCAGATGCCATTCCGATGCGAGTTCTGCTCAAGGCTGTTCAAGCACAAGCGGTCGCGCGACCGCCACGTGAAGTTGCACACCGGCGACCGCAAGTATCGCTGCCAGCACTGCGAGTCCGCCTTCTCCAGGAGCGACCACCTGAAGATCCACATGAAGACACACGACAACCAGAAGCCGTTCCAGTGCACGGTGTGCAACCGTGGCTACAACACCGCTGCGGCGCTCACGTCGCACATGCAGGGGCACAAGCGCGACCGCGACTCCCGCGACGACCGCCGTCGCGCGCTGCGCTGTCTGCGATGCGGGGACCCGTTTCGCAGGCCGGATATGTTGCAGGCCCACATGGTGAGCGTTCACGGAATGGATGTGGCGGCAATGACGCCCCCTCGTCGAATAGCGTCGCAACCGCCGCCAACGCTACTCGCGTGCATGTATTGCACCCGCGATACTTTCACCAGCATGGAGCAACTGCAATTACATGTACGCGCGACGCACTCTGCGCTTCTTAATGGCGAATCTCCTCTATCGGGTTCAGTCGATCAACCTGCTCCCACGGACTTGAGTCGCCGGGCACCACAAGAATCTTCAGCTAAAAGAGCGAGCTCGGCGAGTGACAGCCAAGAGTCGAAGAGAAGACGATCCGGCTCGGAAACGCCAAAAACTGCTTTGTCACCCAGTACTCTCCTTTGCAATCAGTGCGATGCCGCCTTACCCGATTTCGAAGCATTTCGAGCTCATCTAAAAGGACATTTAGAAGAGGGAGGAGAATTGGGAAACTCAAGTCCCGTGCCCTGCGTCCATTGCGGTGCTACTTTCGCCGACGCCGCCGCGTCCGAACGACATCTCACAGCGCACTACCTAGCCGTCACCTGCGAATACACCTGCCACAGCTGCTCGAGAAGTTTTCCCGCGCCCGACGACCTGCAGAAGCATCTTCTGGATTTGCACGCCCATCATCTGTACCGCTGTTCTCTGTGTAAAGAGATATTCGACTCGAAAGTGGCGATTCAGGTCCACTTCGCGGTCGCGCACAGTGGCGAGAGCAAGGTGTGGGTGTGTCGCGGCTGCGGCGCGGGCAGCGGGCCGCTGCGCTCGGAGGCGGAGGGCGCGGCGCACGTGGCGGCGCGGCACGCCGTGCGCTGCGCGTGCGGCGCCGCGCTGGCCGGCCCGCGGGCCCGCGGCGCCCAGGCCTTCCGCTGCCCCGCGCCCGGCTGCAAGGACACCTTCGCCGTGCAGTACCTTTTGGAGAGGCACATGCAGGCCCACCACACGGTGCCGCTACCCACGATAAACGGCGACATGACTAGATCCAAACGAGTGGAGAACAACAACGCGGCGGACGGCGAGGGTGGCTGCTCGccctgcggcggcggcgacgcgagcgggccgccgccgcccgcaccGGAGGACCGTCGCCGCAAGAACGGCGCGGTGGCGCTACAGTGCGCGTACTGCGGGGAGCGCACGCGCAGCCGCGCCGAGCTGGAGGCACACACGCGCGCGCACTCGGGCTCCGCCGCCGCGAGGCACAAGTGCCTGATCTGCGACGAGGTCCTGCCCTCCGCGGCCGTCCTGGCCGAGCACAAGCTCACACACTGCAAGGTGGTCGCCGGGGACACGTGCGCCcgctgccgcgcgcggctgcccaCCGAGGAGTCGTTCCTGTCGCACATGGCGCGGCACCACCCCGCGCTGCCCGCGCCGTGCGTGGTGTGCCGCCAGACGCTGTCGTCGGAGGCGGAGGCGCGGCTGCACGCGCGCTTCCACCTGCGCGTGTCGGAGGACGAGCAGCGCTGCGCGATCTGCCTGCGCGCGCTGCCCGAGGGCGCGGCGGGCGAGGGCGCGCGCGCGTGCGCCGCCTGCTACGCGCGCCACGCGGgcccgcgcgcgcccgccgccgccgccgccgccgccgccgcgcccgcgcccgcgccgcagccCGACCACGACTGCCGCCTGTGCCGCCGCGCGCTCGGATCGCCCACGCGCCTTCAGGCCCACCTGATCGAGCACACGTTCGCGGGCATCGGCGCGTTCACGTGCTACCTGTGCTCGGCGGTGTTCACGAGCGCGGCGGGGCTGCAGCGGCACCTGCCCGAGCACTCGTCGGCCCCGCGCCCCTACGACTGCGGCCGCTGCGGACTCAAGTTCTTCTTCCGGGCCGAGCTCGACAACCACGCCTTCGTTCACCTTGAGGAGGCGGAGATCGCCCAGAGAGCCTTCTACGAGGCGTACGCGCGGGGCGCCGCCTCGGCCTGGGCGGCGTTGGCGCCCCCCGCCGACCGCCCCTCGACCACCCCGATCACCGTGGAAGTCCCCGTCAAGCAGGAACTCGAAATCAAAGAAGAGAAAACCGAGGAGTACATCGAAGTGGCGTCCCCTCCAccccccgccccgccgcccgAGCCCTCGTCCCCGGCCCCTGTTGTGAAGCAAGAGAAAACTGATGAAGACTGA
Protein Sequence: MIMLFKGNSSRLEHLIEKIQANKENHDVTSEELKEALGSVGSTAGSSWPSSTPEPSPSPASTPTSADAAEDPEASFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCQHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDRDSRDDRRRALRCLRCGDPFRRPDMLQAHMVSVHGMDVAAMTPPRRIASQPPPTLLACMYCTRDTFTSMEQLQLHVRATHSALLNGESPLSGSVDQPAPTDLSRRAPQESSAKRASSASDSQESKRRRSGSETPKTALSPSTLLCNQCDAALPDFEAFRAHLKGHLEEGGELGNSSPVPCVHCGATFADAAASERHLTAHYLAVTCEYTCHSCSRSFPAPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWVCRGCGAGSGPLRSEAEGAAHVAARHAVRCACGAALAGPRARGAQAFRCPAPGCKDTFAVQYLLERHMQAHHTVPLPTINGDMTRSKRVENNNAADGEGGCSPCGGGDASGPPPPAPEDRRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGSAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCARCRARLPTEESFLSHMARHHPALPAPCVVCRQTLSSEAEARLHARFHLRVSEDEQRCAICLRALPEGAAGEGARACAACYARHAGPRAPAAAAAAAAAPAPAPQPDHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHSSAPRPYDCGRCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALAPPADRPSTTPITVEVPVKQELEIKEEKTEEYIEVASPPPPAPPPEPSSPAPVVKQEKTDED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01437318;
90% Identity: iTF_00208149;
80% Identity: -