Blac026933.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- ZFY
- Assembly
- GCA_905147135.1
- Location
- LR990059.1:16950075-16957035[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.012 1.1 10.8 0.4 2 23 247 268 246 268 0.96 2 17 1.8 1.7e+02 4.0 0.1 2 22 309 329 308 331 0.88 3 17 0.0005 0.046 15.2 0.3 3 23 355 375 354 375 0.98 4 17 0.0066 0.6 11.7 0.2 1 23 384 407 384 407 0.96 5 17 0.04 3.7 9.2 0.0 1 23 413 435 413 435 0.97 6 17 0.26 23 6.7 2.9 1 23 444 466 444 466 0.97 7 17 0.0054 0.49 12.0 0.4 1 23 575 597 575 597 0.96 8 17 0.0002 0.018 16.5 1.0 2 23 604 626 603 626 0.92 9 17 7e-06 0.00064 21.1 0.3 3 23 634 654 634 654 0.99 10 17 5.6e-07 5.1e-05 24.5 0.7 1 23 660 682 660 682 0.99 11 17 6.6e-05 0.006 18.0 1.5 1 23 688 710 688 710 0.98 12 17 0.052 4.8 8.9 3.5 1 23 727 749 727 750 0.93 13 17 1.7 1.6e+02 4.1 0.1 2 20 792 809 791 812 0.72 14 17 9.7e-05 0.0088 17.5 0.3 1 23 816 839 816 839 0.94 15 17 5e-06 0.00045 21.5 2.1 1 23 845 867 845 867 0.98 16 17 0.0012 0.11 14.0 0.1 1 23 873 895 873 895 0.98 17 17 0.0036 0.33 12.5 0.0 2 23 900 921 899 921 0.95
Sequence Information
- Coding Sequence
- ATGAATACTGAAACGGAGCAAATATTTATATGTGTAACACCTTCTGACAACATTTCTGCTGATGTGTCTCAAAAGTTTATTGAAACACCTGCCTTAGGGCCTACTAACCTCGAAAATGTGGAGGACTTCTCAAATGTTTGCCGTACATGTGCTAATGTTACGGAATTCCTCATTCCCATATTTGAGGGTGAGGGGCTGCAGAGTAACCTTGCTGAGAAGGTTaacaaatatttacccataCAAGTGAGTCCCCTAGACACTCTGCCGGTGGCGATGTGCTACCAGTGCGCGCACGCGCTGCTGGCGTGGCACGAggtggcggcggccgcgccgcgAGCCGACCACGCGCTGCGGGAAGCACAGTGGCGGTTCGAGCAGAAGATACGGGAACAAAATCCAGCCAGCATAGAAGAAAACCAAAGTTTAGAAAATACAAATGACAAAGAGTCAGGAACCGTATTGATTGTGCGTATTCTGAACGATTACTTGTCCGCGCTTGGCATAGACGGGGAGAGTTCCGATTTGCAGTTCGTCTGTCAGAAATGTCCGGAGCagccggcggcggcgacggcgggcgCGATGGCCGGGCATTTGACATCTACACATGAGGCTGATCTGATGAGTGGCTCGCTTAAACAATTCGTGGAAGACAACATAACCGTTGAGGAGCAACTGGTCCTGGAGGATGTCGACGAGGTCTCCATAGCTAAAGAGGTCAAAGAAGAGTTGCCCCATCTGTCGTGTCCGTTCTGCAGCAGCGTATTCTCATCCCCGACTCGGCTGCTGAGCCATCTCAGCCGGCACGTCGACGTCTGCGTCGCGAGCGGGGTCACCTGCTGCGATCAGGAGTACCACTCCAAGGCCGCCTTCGCTTGGCACCTGCAGGAGATGCACGTGGAGGGCGGGGAGGCGGGGGGCGGGGTAAAGTGTCGCGCGTGCGGCCACACAGCCGTCGACGAGAACGAGTTGAAGGAGCACATCGGGGCCGCCCACCCGGAGCCCGGCGGGAACCGCGGCAAAACAAAACTCGGCCCGAACAACATCAAGCGGAAGCCGGTCGCCTGCCCCGTCTGCGAGAAGACGTTCTCGAACGTGTACCACGCGACGGAGCACCTGGCGACGcacgacgccgccgccgccccgcggAGGTTCCCCTGCGACCGCTGCGGCAAGGTGTACCAGTGGCAGAAGTCCCTCGCGAAGCACGTGCGGcaggcgcacgagggccggctGCGGTTCCactgcggcgcgtgcggcgagGCCTTCCCCGACCGCGCCGCGCGTGCCGCGCACGCTCGCCGGCACGCCGCCGAGCCCGCGCCCGGGACGCACCGCTGCCGCTACTGCGACAAGGCCCTCCACTCCGGCCAGGCCCTTGCCGCGCACCTGCACATGCACCTCGACGTGCGGAACTACAGCTGCGAGCCCTCCGACGAGGACGACCGGCCGCTCGCGGCGGCGGCAGCCCCGGCGACCGCCTACGCCGCCTTCTACGCCGCGCTCGTCGGGTTCCGCGACCACCTGCTCGCCGCCCACGGCCCGCGACtcgcctccgactccgactcGGACTCGGCCTCGTCGGACACGGCGGgctcggccgccgccgccgccgacggctACGACGACCTCACCTGCGACAACATGCGCCGCGACCGCCTCGACCCGGCCGCGCGGCGCGAGCTGTCGCTGGCGCGCTGCCGCGACGCCGCCGGCCGGCTGCGCTACGCCTGCGCCGCCTGCGGGAAGCGGCTGAGCTCCCCGCACACGTACCTGGTGCACCGGCGCATCCACACCGGGGAGCGGCCGTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGCGCGCCGGGCGGGCTGCGGCGGCACCTCGCCGAGACGCacgagcgccgccgccgcgtggGCTGCCCCGACTGCGGCGGCACCTTCGCCAACGCGCAGAACCTGCGCCAGCACCGCCGCACGCACACCGGCGAGCGGCCCTTCGAGTGCCCGCAGTGCGGCCGCCGGTTCGCGCAGAGCGGCGCGCTGCACGCCCACCGGCGGACGCACGACGCGGCCCGCCCGCACCGCTGCCCGCACTGCCCGGCCGCCTTCCGGCTGCGGGCGGCCCTGgcgcgccaccgccgccgccacgaggcccccgcgcccgccgcgcccgcgtcgcccgccccgccgcgcccgcACGCCTGCGCGCTCTGCCCGGCCGCGTTCCGGCTGCGCGCCGCGCTGGCCCACCACCATCGCCGGCACCAcggcccgcccgcgcccgcgcccgcccccgcccccgcgcccgagCCGGACAATGCTCAGCACACACCGCCGGCGGATGCCGCGGCGGACACTCCGGCCGTCGCTCCGGACGGTAAGCGGTACGTGTCGTGTCCCGATTgcgggcggcgggtggcggcgCGCGGCTGGCGGCGGCACCGCACCGCGCACACCAAACGGCACGCGTGCCCCCACTGCGAGCGGGCGTTCGGCGAGGCGGGGAACCTCGCGCGGCACATCCGCGACACGCACCTCCACGCCCGGCCGCACACATGCCCGCAATGCGAGACGACGTTCGCCCGCCTCGCGCATCTCGAAGACCACATGCGCTCGCACGCCGAGCGGCGCGAGTTCGTGTGCGAGCGCTGCGGGCTGGCCACGAagtcggcggcggcgctgcgCTCGCACGGCCGCCGCCACGGCGCCCCGCTGCCGTGCCCGCGCTGCCCGGCCGCGTTCCGCCGGCGGCCCGCGCTCGCCGCCCACGTCGCCTCGCATCGCTGA
- Protein Sequence
- MNTETEQIFICVTPSDNISADVSQKFIETPALGPTNLENVEDFSNVCRTCANVTEFLIPIFEGEGLQSNLAEKVNKYLPIQVSPLDTLPVAMCYQCAHALLAWHEVAAAAPRADHALREAQWRFEQKIREQNPASIEENQSLENTNDKESGTVLIVRILNDYLSALGIDGESSDLQFVCQKCPEQPAAATAGAMAGHLTSTHEADLMSGSLKQFVEDNITVEEQLVLEDVDEVSIAKEVKEELPHLSCPFCSSVFSSPTRLLSHLSRHVDVCVASGVTCCDQEYHSKAAFAWHLQEMHVEGGEAGGGVKCRACGHTAVDENELKEHIGAAHPEPGGNRGKTKLGPNNIKRKPVACPVCEKTFSNVYHATEHLATHDAAAAPRRFPCDRCGKVYQWQKSLAKHVRQAHEGRLRFHCGACGEAFPDRAARAAHARRHAAEPAPGTHRCRYCDKALHSGQALAAHLHMHLDVRNYSCEPSDEDDRPLAAAAAPATAYAAFYAALVGFRDHLLAAHGPRLASDSDSDSASSDTAGSAAAAADGYDDLTCDNMRRDRLDPAARRELSLARCRDAAGRLRYACAACGKRLSSPHTYLVHRRIHTGERPCVCHVCGKQFRAPGGLRRHLAETHERRRRVGCPDCGGTFANAQNLRQHRRTHTGERPFECPQCGRRFAQSGALHAHRRTHDAARPHRCPHCPAAFRLRAALARHRRRHEAPAPAAPASPAPPRPHACALCPAAFRLRAALAHHHRRHHGPPAPAPAPAPAPEPDNAQHTPPADAAADTPAVAPDGKRYVSCPDCGRRVAARGWRRHRTAHTKRHACPHCERAFGEAGNLARHIRDTHLHARPHTCPQCETTFARLAHLEDHMRSHAERREFVCERCGLATKSAAALRSHGRRHGAPLPCPRCPAAFRRRPALAAHVASHR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -