Basic Information

Insect: Blastobasis lacticolella
Gene Symbol: -
Assembly: GCA_905147135.1
Location: LR990048.1:13652129-13670921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5.9e-05 0.0054 18.1 2.4 1 23 429 451 429 451 0.97

2 20 0.0052 0.47 12.0 0.6 1 20 457 476 457 479 0.94

3 20 2.6e-05 0.0024 19.3 5.6 1 23 498 520 498 520 0.98

4 20 4.6e-05 0.0042 18.5 4.6 1 23 526 548 526 548 0.99

5 20 4.6e-05 0.0042 18.5 5.3 1 23 554 576 554 576 0.97

6 20 2.1e-05 0.0019 19.5 7.2 1 23 582 604 582 604 0.97

7 20 8.5e-07 7.8e-05 23.9 3.7 1 23 610 632 610 632 0.98

8 20 0.00013 0.011 17.1 6.7 1 23 638 660 638 660 0.97

9 20 0.00012 0.011 17.1 6.5 1 23 666 688 666 688 0.97

10 20 6e-07 5.5e-05 24.4 1.9 1 23 694 716 694 716 0.98

11 20 5.9e-05 0.0053 18.2 8.1 1 23 722 744 722 744 0.98

12 20 5.1e-05 0.0046 18.4 6.8 1 23 750 772 750 772 0.98

13 20 2.1e-05 0.0019 19.6 6.6 1 23 778 800 778 800 0.98

14 20 0.00019 0.017 16.6 8.9 1 23 806 828 806 828 0.97

15 20 2.7e-05 0.0025 19.2 7.1 1 23 834 856 834 856 0.97

16 20 3e-05 0.0028 19.0 6.1 1 23 862 884 862 884 0.98

17 20 7e-05 0.0064 17.9 7.8 1 23 890 912 890 912 0.97

18 20 7.5e-06 0.00068 21.0 3.2 1 23 918 940 918 940 0.96

19 20 0.0009 0.082 14.4 0.3 1 23 947 969 947 969 0.96

20 20 0.56 51 5.6 5.2 1 23 979 1001 979 1001 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5.9e-05	0.0054	18.1	2.4	1	23	429	451	429	451	0.97
2	20	0.0052	0.47	12.0	0.6	1	20	457	476	457	479	0.94
3	20	2.6e-05	0.0024	19.3	5.6	1	23	498	520	498	520	0.98
4	20	4.6e-05	0.0042	18.5	4.6	1	23	526	548	526	548	0.99
5	20	4.6e-05	0.0042	18.5	5.3	1	23	554	576	554	576	0.97
6	20	2.1e-05	0.0019	19.5	7.2	1	23	582	604	582	604	0.97
7	20	8.5e-07	7.8e-05	23.9	3.7	1	23	610	632	610	632	0.98
8	20	0.00013	0.011	17.1	6.7	1	23	638	660	638	660	0.97
9	20	0.00012	0.011	17.1	6.5	1	23	666	688	666	688	0.97
10	20	6e-07	5.5e-05	24.4	1.9	1	23	694	716	694	716	0.98
11	20	5.9e-05	0.0053	18.2	8.1	1	23	722	744	722	744	0.98
12	20	5.1e-05	0.0046	18.4	6.8	1	23	750	772	750	772	0.98
13	20	2.1e-05	0.0019	19.6	6.6	1	23	778	800	778	800	0.98
14	20	0.00019	0.017	16.6	8.9	1	23	806	828	806	828	0.97
15	20	2.7e-05	0.0025	19.2	7.1	1	23	834	856	834	856	0.97
16	20	3e-05	0.0028	19.0	6.1	1	23	862	884	862	884	0.98
17	20	7e-05	0.0064	17.9	7.8	1	23	890	912	890	912	0.97
18	20	7.5e-06	0.00068	21.0	3.2	1	23	918	940	918	940	0.96
19	20	0.0009	0.082	14.4	0.3	1	23	947	969	947	969	0.96
20	20	0.56	51	5.6	5.2	1	23	979	1001	979	1001	0.98

Sequence Information

Coding Sequence: ATGAATCAGGAACATCATAATATGAATACGGGTGGAGGCCAGCCCCCTGGAAACTCCGAGGTTCAGAGAGTGCAACCGGGGCAACAGCAACAGCAGGCAAGCCTCACACCCACGACTTCTGCGACAGACCTACGAGTGAATACAGCGGCGGTAAACGTTGCATTGTCCAGTGTGGCAAAATACTGGGTGTTTACCAACTTGTTCCCTGGTCCAATACCACAAGTTTCTGTGTATGGTTTACCAGCTGGAGCTAGAATTGAAAATGGAAAGCCTGTAcagGAGATAGGTCAAGCTCATGCAAGTGCCATTCTAAATGGAGATCCTAACATCATCCTGGGACACCATGGGGGGCAGGCACAAGTATCTGTGTCTGCTGCGGGTTCTCAACAAATTCCAGTATCACAGATCATTGCCACACAATCTGGACAAACTCATGAAGCTCTGGTCGCCCACAACCAGCAGCAGGAGATGCCTCAACAGCAAGGGTCGAGTGCCGGTTCCCAAGTCACGGTGACGTCAGGCCAACCCAACCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGggtCATCACTCACAGCAGCATATAATGTCACAGCAGTTAATGGCTGCACGACCTGATCATCCCAACCAGCAGATCCAGCTGACGGTCAGTGAGGACGGCATTGTGACGGTGGTGGAGCCAAGCGGCAACAACAAGATGGTGGAGAAAGACGACATGCATGAAGGCATTAAGATGCCTTCCGATCATACACTGACTGTACACCAACTACAACAGATTGTTGGACAACAGGTACTAGACAGCGTGGTACGCATCGAGCAAGCCACCGGCGAGCCGGCGAACATATTGGTGACCCACAACCCCGATGGCACAACGTCCATAGAGGCGAGCGCCACGTCGGACCCGCTTATAGTGAAGGACGAGAAGGCAGCTGCGGCCAAAATCGATGCGGCCCAGTTCGCTATACCGGCCGAGATTAAGGATATCAAGGGAATCGATTTGAAGAACGTAGGACAACTGGGTATGGAAGGAGCTGTTGTGAAGATATCCGGGGGCGCGAACGAGCACGACATCCACGCCATGTACAAGGTGAATGTTGAAGACTTGTCGCAACTGCTCGCCTATCATGAAGTTTTCGGCAAGTTGAACCAGGAAGGCACCCAGACACAGAATAAGGTGATTGGAACAGAAGTGGAGGTGGAGGCCGGCACGAGTAGTGCGATGAACGACGAATCCTCGCCTGGCCATCACTCGTGTGATCTCTGTGGCAAGGTCTTCCAGTACCGGTACCAGCTTATTGTTCACAGGCGATACCATGGCGAGAGTAAACCATTCACATGCCAAGTGTGTGGCTCTGCTTTTGCCAATCCTGTCGAGCTTTCAAGGCATGGAAAATGCCATCTTGCTGGGGACCCAGCAGAAAGACACGCGAAGAGACTGTCCCAGGATAAGCCCTACGCGTGTACGACTTGCCACAAAACTTTCTCTCGCAAAGAGCATCTCGACAACCATGTGCGAAGCCACACTGGGGAGACCCCATACAGGTGTCAGTATTGTGCGAAGACATTCACGCGGAAAGAACACATGGTGAACCACGTGCGCAAACACACGGGAGAGACGCCACACCGCTGCGACATATGCAAGAAGAGTTTTACGCGCAAAGAACATTTCATGAACCACGTCATGTGGCATACAgGTGAGACACCGCACCATTGTCAAATATGTGGCAAGAAGTATACTAGGCGAGAGCATTTAGTGAATCATATGCGGTCGCATACGAACGATACCCCGTTCCGGTGCACGCTCTGTGGGAAGTCTTTCACAAGGAAGGAGCACTTCACCAACCACATAATGTGGCACTCGGGCGAGACCCCGCACCGGTGCGACTTCTGTTCGAAGACGTTCACACGCAAGGAGCACCTACTCAACCACGTGAGACAACACACGGGCGAGTCgccccaccgctgcaacttctGTTCGAAGTCTTTCACACGCCGTGAGCACCTGGTGAACCATGTGCGCCAACACACCGGCGAGACGCCTTTCCAGTGCGGTTACTGCCCCAAGGCTTTCACTAGGAAGGACCACTTGGTTAACCACGTGCGCCAACACACCGGCGAGTCACCACACAAGTGCACGTTCTGCACGAAGTCTTTCACGAGAAAGGAGCATCTCACCAACCACGTGAGACAACACACGGGCGAGTCACCACACCGATGCACGTTCTGCGCCAAATCGTTCACGAGAAAGGAGCACCTCACCAATCATATACGCCAACACACGGGCGAAACGCCACACAAGTGCTCGTACTGCACGCGCGCGTTCTCGCGCAAGGAGCACCTCACCAACCACATCAAGCAGCACACCGGAGACGCGCCGCATACGTGCACCTTCTGCCACAAGAGCTTCACGAGGAAGGAGCATCTCGTCAATCACGTGCGACAACACACGGGCGAGACGCCGTTCAAGTGCACGTACTGTTCGAAGTCTTTCTCGAGGAAGGAGCACCTCACCAACCACGTGCATCTGCACACCGGCGAGACGCCGCACAAGTGCGCCTTCTGTACCAAGACCTTCTCCAGGAAGGAGCATCTCACCAACCACGTCAGGATACACACGGGCGAGTCGCCGCACCGATGTGAGTTTTGCCAGAAGACTTTCACAAGGAAGGAGCATCTCACCAACCATTTGAAGCAGCACACGGGAGACACGCCGCACGCTTGCAAGATATGCGCCAAGCCGTTCACCAGGAAGGAGCATCTTGTTACGCATATGCGATCACACAGTTGCGGCGAACGACCGTTCAGCTGCGGGGAGTGCGGCAAGTCGTTCCCGTTGAAGGGTAATCTGTTGTTCCATGAACGCTCCCACAACAAGGGCGCCGGCGGCAACCGGCCCTTCCGATGTGATATATGTTCGAAGGATTTCCTATGTAAAGGCCACCTGGTGTCGCACCGGCGCACGCACGGCGAGGCAGCCGAGGCGACGGCGGGAGACGTGGCGGCCGGCGACGAGTGCTCGGACATCAAATGCAAGAAGGAGCCCGTCGAACGGAAGCCAGACGTCAGAACGGGCTCGGAAAACATTCCTGCCGATGCGAATGTCTCCCAGCTCCAGCAGAATACTCAACAACAAGCAACTGTGATGCAAATTACTAGCCAGCAGGTGGTGCGAGCAGCGGGCAACGCGACGGCGGCGGTTCCCGGCGCGTTCCCGCACCCGCCCACCACGCAGCACCATGCCTCCGCCGGGCTCGCCCACCATCCGGTCACTGTGAACTACTAG
Protein Sequence: MNQEHHNMNTGGGQPPGNSEVQRVQPGQQQQQASLTPTTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQEIGQAHASAILNGDPNIILGHHGGQAQVSVSAAGSQQIPVSQIIATQSGQTHEALVAHNQQQEMPQQQGSSAGSQVTVTSGQPNHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMSQQLMAARPDHPNQQIQLTVSEDGIVTVVEPSGNNKMVEKDDMHEGIKMPSDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASATSDPLIVKDEKAAAAKIDAAQFAIPAEIKDIKGIDLKNVGQLGMEGAVVKISGGANEHDIHAMYKVNVEDLSQLLAYHEVFGKLNQEGTQTQNKVIGTEVEVEAGTSSAMNDESSPGHHSCDLCGKVFQYRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRLSQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCTLCGKSFTRKEHFTNHIMWHSGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCSYCTRAFSRKEHLTNHIKQHTGDAPHTCTFCHKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKICAKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGAGGNRPFRCDICSKDFLCKGHLVSHRRTHGEAAEATAGDVAAGDECSDIKCKKEPVERKPDVRTGSENIPADANVSQLQQNTQQQATVMQITSQQVVRAAGNATAAVPGAFPHPPTTQHHASAGLAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00208109;
80% Identity: -