Basic Information

Gene Symbol
-
Assembly
GCA_905147135.1
Location
LR990062.1:10031202-10036030[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.077 1.2e+02 4.0 0.0 2 13 85 96 84 100 0.89
2 7 0.36 5.4e+02 1.8 0.0 23 39 361 376 352 380 0.92
3 7 0.0034 5.1 8.3 0.1 12 43 444 480 430 482 0.70
4 7 0.022 33 5.7 0.2 23 46 609 631 595 631 0.82
5 7 0.0039 5.8 8.1 0.0 3 45 680 731 679 732 0.87
6 7 0.00084 1.3 10.3 0.2 13 42 855 891 842 895 0.87
7 7 0.18 2.7e+02 2.8 0.3 3 14 1053 1064 1051 1069 0.87

Sequence Information

Coding Sequence
ATGGACCTTAATCAGATGATTGTGAAGTCTGAGATGGAAATAAATGGAGAATTGTTGGTGTTTTATGTTGATGAGAACAATAGTCAGGAAGGAGGAGTTATAACATCCATAGAAAATATTGAAGGTGCCACTTTAGAACAGCTCCAACAGGGTAACTATATTATAGAAGATGTCAGTCAGTTGTCCAATGAGGTGGAAACTGCTGAAACCATTGAGACTGTTGAAATTGAGGAATCTAATGAGCAGAATACTGGCAGATGGACTGACGAAGAGACTAGAAGGCTTTTGGTATTTTACATTGATAATAAAGAAACATTCCTTAATGGTACcactaagaaaaaacatttatggGCCGTTGCATGCAAGACTATGTTACCGGAAAAGGTTCCAGCGACCTGTGAAACGAAGCTTCGCAATTTGAAACGCAGCTACACTATGATACGTGTTGACTTAACTAAAGGGAAGACCTTTGTTTGGCCTTATTATGACTTATGTCATCAGGCTTTCCATGACGATAACTATGTAAACATGTTACTTTTAAATGCATCTTCGAAGCAAACTACACAAGTCCCTGTGCAAGTAAGTGCTCCAGTAGCCCCTTCAAATGAAGAGGGCATTGTGGTGGTAAAAAAACCAATTCCCAATAAGCACGCTGATGAAAAGGTTGAGCAAATGCTCAACACATACTTAAAGTATAAAAAGAGCAATCAACCTTATTGGCAGAAACATGTCTGGGAGAAAATAGCTATAGAGGTCGGAGAAGATGGCGACTATTGGCACAAACGTTTCTTGAATTTCAAACAGCACTACATCAGAATGTTAGAAAAACGTCGAGACACTGGACCCAAAAGCATCAACTGGccatattttgatatttttgatcAAATTTTCGAAAACGATCCGGAGTTTCAGAAAAAATATGGGTATATACAGCATGAAATTCAAACAGTCGCTATTGAACCTACAGTAGCACAATATGTAAATCATGAATGGAACGATACTGAGAAAACAGTGCTGGTAAAGTATTGCTTTGATTGTCTAGATGAGTTTCAAGATCCATCAATCCCTGATGGTTTCTTGTGGAACGAAGTTGGTAGACTATTAGATAAAACTGCAAATGAATGCATGAAAATGTATGACGAATTGAAAAATTCACACATTGAAAATTTTTGCAACGGTGATTATGATTTGCGTATGCGTATACCTGTAGCTATACTTTTCGATAatataatatctaaagaaacTGAAATTAAACTCGCTGCAATATCCAAAAAACCAGGACATTTAGAACCCTGGCCAACCGAAGAATTGGACCAACTGGTGCAGTTTTTCTATGATAATGTAGAAATGTTCAAAGACCCTGTATGCCATTATGTTTGCTGGGCTGTTATAAGTAAGAAACTGGATAGGTCTCTACAGACATGTAAACAGCAGTGGGAGGACCTTACTATGCTGTATAAAACCATTTTGAATGATAAGAAAGAAGACCCTGACATGGAAATTGATTGGAGATACATTGATTTATTTGAAAGAATATTTGACTATGGCATGGACGCAAAGTTGTTGGAAGATCAGTTAGCAACGGATACTAATGAGGATGTAGAAGAGGAAAGTTCTTCAAAAGTAGTTGGAGGTGGTAGAATGAAGAAACTCAACATTAAAGTTGAAGATCTATCAGATGATGAGGAGTTTGAGGATGAAGGGACTGGTACATCTGGGAAGCGCTCCCGAGGCATCGGAGACCCGAAATCCTTTAAAATCCTTGAATATTACTACAAAAATAAGGAGAAGTTTGCTAACACCCAGCGAAGGAAGCAGAACATATGGGGAGTGCTGGCAAAGCAAATAGGGATGTCGGCTGAGCAATGTGCTCACCGATTCAGAAACCTGAAACAGGTCTACATTGCATACGTACAGAGAGAAATCAGTAAGCCAGAAAAGCCAATCCTCTGGCCTTATTACAGCCTGTGTAAGAAAGTCTTCGGTTACAGAGCACTGAAAAATAAGCTTAAAAGTGGCAAGGCCGATATATTTGAGGAGTGGACTGCAAAGGAAATAAAGCAAGTCATCAATCATTTTGCGAAGAACTTTGATGTAATCGAGCAGCATCCAGAAGATTTAAATGTTTGGATATCTCTGGCCCAGGTGTTAGGCAAAGTGGTTGTCTCGTGCCGTGACAAATTCCTTGAGCTGAAAAAGTCTTACATGAGAGTTAAGACAGTGATGCGCAGAAGCCCAGAGAGTAAGGTGAATTGGAAATATCTTAAGATGTTTGATGAGATATATTCCGGTATGAATGTGGTGGAGGCAATGGATATAGACACAGATGAAGAGAGTTTAGAGAAGGCTGATACTTCCGCAAATGCTGTGAAAATCGAAAATACTGAGACTGAAGaCGACGACTACCAGTGCCTCATTGTGATGCCTGATGGACAAACAATTGCAGGGGTGCCCAATGCTGAAATAATTCTAAAGGGAAACCAGGACCAGTCCCAGGAGAAACCAAAAATAGTCCACTCGTCATGGCTGCAAAAGAACAGGAAGAAACTATTAGAATTGTATTTGGAGTATGTGCAAGCCCATCAAGGCAAAGTAATTAACACAGTGGAAATGTGGAAGGAACTCGCGTCGCATTTTCCCAAAAAGAACGCTACTAGTTGCAGACGAGTTTACTCAAGGTTAAAGTTTGAGTACAGGAACAACATCAGTGacccaaaatacaaaaaatctaaatattgtgAATTATTGAAACAGATCTTCGCTGCTAAGCCAAAATATTACCGCCCCGAACAGGAATTCGACTTGAATGAGATGAACCCCAGCACAGTTAAAGACGTGTCAATGGCCTCCTGGAAAGTTGAAGAAGCTCTGAGGTATTACTTGGAGCATTTAGAGGAGTTTATAAACCCAAAATATTCTGCAAACCATGCTTGGAAGGAGCTCGCAAACAGCACGTCTTTGACTGTCTCAAGAGTGTACAAGAAGATAACTTTCATCAAACAGTACTTTAACAGTGAGACGAATGAGGTGGCCAGTCAAAAGGTGGAATATGGTGATCTGGTGAGGCAGATATTTGAAAAGGAGTTCGCGCTTCGGATTCTCATAGATTCTCAACCGAAGCCTTCGACTGCTGAGGTAGAGGATGATACAGATTCAACATGGACGGATGAAGAGATAGACCAGCTTTTACATTGGTATTTGAACAACTTGGACAAGTTCAAGAACCCAAAATACGTCACGAGCTATCTCTGGATGGAGGCTCCTCAGGTTTTGGGTAAAAGTGCGGTAGCGTGTTCTGAGAAAATGTCGCAGATTAGAACGCAATACAGCTCCATGGTGAAAGAGAACCCAGACCTCCTGCCGACTTGGCGTTACTATGAATTATGTCAGAAGATATATGGCACAGGTAAACGGAATGTACCGAACAATGAATAG
Protein Sequence
MDLNQMIVKSEMEINGELLVFYVDENNSQEGGVITSIENIEGATLEQLQQGNYIIEDVSQLSNEVETAETIETVEIEESNEQNTGRWTDEETRRLLVFYIDNKETFLNGTTKKKHLWAVACKTMLPEKVPATCETKLRNLKRSYTMIRVDLTKGKTFVWPYYDLCHQAFHDDNYVNMLLLNASSKQTTQVPVQVSAPVAPSNEEGIVVVKKPIPNKHADEKVEQMLNTYLKYKKSNQPYWQKHVWEKIAIEVGEDGDYWHKRFLNFKQHYIRMLEKRRDTGPKSINWPYFDIFDQIFENDPEFQKKYGYIQHEIQTVAIEPTVAQYVNHEWNDTEKTVLVKYCFDCLDEFQDPSIPDGFLWNEVGRLLDKTANECMKMYDELKNSHIENFCNGDYDLRMRIPVAILFDNIISKETEIKLAAISKKPGHLEPWPTEELDQLVQFFYDNVEMFKDPVCHYVCWAVISKKLDRSLQTCKQQWEDLTMLYKTILNDKKEDPDMEIDWRYIDLFERIFDYGMDAKLLEDQLATDTNEDVEEESSSKVVGGGRMKKLNIKVEDLSDDEEFEDEGTGTSGKRSRGIGDPKSFKILEYYYKNKEKFANTQRRKQNIWGVLAKQIGMSAEQCAHRFRNLKQVYIAYVQREISKPEKPILWPYYSLCKKVFGYRALKNKLKSGKADIFEEWTAKEIKQVINHFAKNFDVIEQHPEDLNVWISLAQVLGKVVVSCRDKFLELKKSYMRVKTVMRRSPESKVNWKYLKMFDEIYSGMNVVEAMDIDTDEESLEKADTSANAVKIENTETEDDDYQCLIVMPDGQTIAGVPNAEIILKGNQDQSQEKPKIVHSSWLQKNRKKLLELYLEYVQAHQGKVINTVEMWKELASHFPKKNATSCRRVYSRLKFEYRNNISDPKYKKSKYCELLKQIFAAKPKYYRPEQEFDLNEMNPSTVKDVSMASWKVEEALRYYLEHLEEFINPKYSANHAWKELANSTSLTVSRVYKKITFIKQYFNSETNEVASQKVEYGDLVRQIFEKEFALRILIDSQPKPSTAEVEDDTDSTWTDEEIDQLLHWYLNNLDKFKNPKYVTSYLWMEAPQVLGKSAVACSEKMSQIRTQYSSMVKENPDLLPTWRYYELCQKIYGTGKRNVPNNE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00207871;
90% Identity
iTF_00207871;
80% Identity
-