Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_905147135.1
Location
LR990052.1:2788412-2797288[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-06 0.0017 19.5 0.0 2 35 289 325 288 330 0.85
2 2 3.8e-08 5.7e-05 24.2 0.0 2 43 369 415 368 417 0.80

Sequence Information

Coding Sequence
ATGCGgaaaattttgttattgtcCTGTACGCTAATAGTGTGTGTAACTGCATGGGATGACGGCGATCTAGAAGTGTTTGACGTGGTAGAAGAAGTAAATCAGAATTTCTACGAATTACTTGGTGTATCACAGgaTGCATCACAATCAGAAGTTAAAAGTGCTTTCAAAAAGCTAACGCTGAAGCTTCACCCTGACAAGAATAGTGCTCCAGATGCAGACATACAATTCAGAAATCTGGTCTCAGTTCACAACATTTTGAAGGATCCAGGAAAAAGAGAAAAgtATAATGAAGTGCTCAAAAACGGTCTTCCAAATTGGCGTTCAGCCATTTACTACTACAGGCATGTCAGAAAAATGGGTCTGGCTGAGGGAGcaattatattattcattattatcacATTTGGTCAATATGCTGTGGCTTGGGCAGCATATATTGAAAAGAAGTATACAGCAgaacaaattttaaataccaAAGGAAGGAAACAGTTAAAAAAAGGATTTGAAAGCGGGTTAGCTGAAGTGATGGAGAGGTTGCCAAGACCCAGTGTGAAAAACACTCTGCCCTTCCAAATACCCAAGATGATCTGGTGGTCAATCTTGGCAATACCAAGAGGGATAATAGAACTGAATAGGTCTATAAAAGAGAGAAGAGAAGAGGAGATCAGGCAAAAAAAGAGGGACGAAGATGACCGTCGCCGAGCCGAGCgcgacgcggcggcggcggaagCCCTGCGCGCGGCGGGcccggcgcggcgccggcgcgcgtTCGTGCCGCCGGAGCGCGACTGCCTGCTGGATCCTGTGGACGAGCCAACTAAGGAAGCTGACGCGGCGCCGGTTAAGGCTCCACCGCTGATATCCGGCGGCCTCTGGACCGACGATGACCTAACGGAACTGGTCCGCCTCGTCAAGAAGTACCCTCCCGGGGCGGCGGAGCGCTGGGAGCGGATCGCGGAGGCCATGGGCCGGTCCGTGCCGGAGGTGACGCATATGGCCGCAAAACTGAAGGAGAACTGCTACAAGATACCGGGGCAGGAGCCCGAGCCGGTCGTTGTGGAGGCGCCTAAGAAGGTGAAGAGTCGCAAGGCGGAGGAGACGTCCGGCGGCAGCTGGGCGCAGCCGCAGCAGCGCGCGCTGGAGGCGGCGCTCGCGAAGCACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATCGCCGCCGCCGTGCCCGGGAAGACCAAGGAAGAATGTATGCAGAGGTGTAAATATTTATCGGAGATGGTGAGGAAGCAGAAACAGAAAGAGGAAGAAGAGCAAAGACTGACGAACGGCGAGGCCGCCGCTGACACCGACTCAGTCCCGGAGAACCACACCGACGATGCGGCGTCATAA
Protein Sequence
MRKILLLSCTLIVCVTAWDDGDLEVFDVVEEVNQNFYELLGVSQDASQSEVKSAFKKLTLKLHPDKNSAPDADIQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGAIILFIIITFGQYAVAWAAYIEKKYTAEQILNTKGRKQLKKGFESGLAEVMERLPRPSVKNTLPFQIPKMIWWSILAIPRGIIELNRSIKERREEEIRQKKRDEDDRRRAERDAAAAEALRAAGPARRRRAFVPPERDCLLDPVDEPTKEADAAPVKAPPLISGGLWTDDDLTELVRLVKKYPPGAAERWERIAEAMGRSVPEVTHMAAKLKENCYKIPGQEPEPVVVEAPKKVKSRKAEETSGGSWAQPQQRALEAALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSEMVRKQKQKEEEEQRLTNGEAAADTDSVPENHTDDAAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00207867;
90% Identity
iTF_00207867;
80% Identity
-