Blac032563.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- -
- Assembly
- GCA_905147135.1
- Location
- LR990066.1:5620958-5629340[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-09 2.7e-06 28.0 0.3 4 34 202 232 199 239 0.90
Sequence Information
- Coding Sequence
- atggatGAAAATATAGAACTTATTGAAGTGAAAATTCAAGAAAATGAAGAAGTAGACAAGTGTCGATGTTGTTTACAGGAAAATGGTCAAAGAATTGAATTGTGGGCTGAATACTACTGCGATGGAGAGAAAGAAAACTACGGGGAGATGTTATCTGAATGTTTCTCTTTAGGTTGGTGTGAGCCAAAGGGCAATACTGAATTCATCTGCCTGGAATGTATTGAGAGTCTCCGAAATGCTTACAACTTCCGGAAGAAACTCATCACgtcaaatatgatattacaaCCGCAAGAAAATTATGTGGCATATGAACCAGTTGGATCCCCGACGAGATTTAAAAAGGAAGATGAGCCTACATTTAGTACTGAAACGGAAAATGTAGTAGATTATGCCGAGCCCATGGAAGATCTGTTTGAAGAGCTCGAAGACGGAGAAGAGGAATATGTACCCACAGTAGAGAGTGACACCGATGATGAGGAGACGAAACGTGAGGAGTATTTAGAAGTGGAGTTTCTAGATGAAGAAAGCAATGCAGACGCAGAAGGAAAGAAGACAAGGCATCGGGCAAAAGGAAAGACTCCCTACAAAAACTATGACAGAAAAACTATCGAAGAAGCCCTGGAGGCTGTGAGAAGTAAAGCCATATCAGTCTCGAAGGCAGCAGCACATTACAAAGTACCGGGGAAGACTATAGCAGCCAAGCTTAGGGCTATGGCGAAAAAGCCCAACAACTCAGGTGACCTTCAGATGGAGGCCTTCGCCATATTGGAGAGAGGCGACACATTAAAAGGACCCTCCAGGAGGAAATTCAAAAAGAACACAGCGATCGAAAAGCATTACAGCAATTTGCGTACAATATTACTTAGCACGAACGCCACGCCGATAAAAGGGCATACCGCGATCGGGTACGGCTGTTGCTTCTGCCCCAGACACTTCCTGGAACCGCTAGAATTGAAGGTCCACACGCTGATGAAACATCCAGCGATGGGAGTCGGATTCGTCAAGTGCAGGAACGTGGCCGAGTTCGCCGTGAAGCTCGACATAACAGAGTTGACTTGCAACTATTGCCGCCAGCGGATAAACAGCTTAGACGAGCTGATGGCGCACTTGTCGACACACGATTTGAAACTATACAGGGACATAAAGAACCAAATACTGCCGTTCTCTTTCACGGATAACGCTGACGTACTAAAATGCTGTATATGCCCATCGCAGTTCAAGTTCTTCAAGCTGCTGTCGGAGCATATGAACGAGCATTACAGGAACTTCGAGTGTCCGTACTGCGATCGGGGTTTCGTTAACAGATGCAGCCTCCGAATGCACACGTACAGGCACCGATTCGGCGAATTCGCCTGCAACTATTGCGGGAAGACGTTCGAATCGCGCGTCAGGAGGAGAGAGCACGTCAGGGTCCTGCATATGCTGCAGAGCAAGGCTTATAAGTGCAGCTACTGCGGTGAGAGGTTCAACGACAGTTGCGCTAGATCGAAGCACGAGACGAATGAACACGGAGCTGTACCGAAGACGTTCCCTTGCTCCGCCTGTGACAGCGTCTTCTTCAGATACAGAGCTCTAAAAGAACACGTCGACATACACCATCTGCTAATGAAGCCGTACCAATGTCGCGAATGCCCGAAGACGTTTGGCAAGAAATGCCTCCTGGACAAACACTCGGTGGTGCACACGAAAACCAGGAACTTCCAGTGCGAGGTCTGCCCGAAGTTGTTTGCGAGGAAGTCGACGCTGGACCAGCATAAGAGACTGCACGATGACGACAGGAGATACGCGTGCGAACACTGTGGGGAGAGATATTTTCAGAAAATTAGCGTCAAGAAGCACATCATGATGAGGCATTTCGACTTGTGCGAATTGGACGAGGAAGATGCCAAGCAAGGGGACGagtga
- Protein Sequence
- MDENIELIEVKIQENEEVDKCRCCLQENGQRIELWAEYYCDGEKENYGEMLSECFSLGWCEPKGNTEFICLECIESLRNAYNFRKKLITSNMILQPQENYVAYEPVGSPTRFKKEDEPTFSTETENVVDYAEPMEDLFEELEDGEEEYVPTVESDTDDEETKREEYLEVEFLDEESNADAEGKKTRHRAKGKTPYKNYDRKTIEEALEAVRSKAISVSKAAAHYKVPGKTIAAKLRAMAKKPNNSGDLQMEAFAILERGDTLKGPSRRKFKKNTAIEKHYSNLRTILLSTNATPIKGHTAIGYGCCFCPRHFLEPLELKVHTLMKHPAMGVGFVKCRNVAEFAVKLDITELTCNYCRQRINSLDELMAHLSTHDLKLYRDIKNQILPFSFTDNADVLKCCICPSQFKFFKLLSEHMNEHYRNFECPYCDRGFVNRCSLRMHTYRHRFGEFACNYCGKTFESRVRRREHVRVLHMLQSKAYKCSYCGERFNDSCARSKHETNEHGAVPKTFPCSACDSVFFRYRALKEHVDIHHLLMKPYQCRECPKTFGKKCLLDKHSVVHTKTRNFQCEVCPKLFARKSTLDQHKRLHDDDRRYACEHCGERYFQKISVKKHIMMRHFDLCELDEEDAKQGDE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00209313; iTF_00208326; iTF_00207846;
- 90% Identity
- iTF_00209313; iTF_00208326; iTF_00207846;
- 80% Identity
- iTF_00209313;