Blac013831.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- -
- Assembly
- GCA_905147135.1
- Location
- LR990047.1:16614489-16614905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-09 7.6e-07 29.8 0.0 1 35 15 49 15 56 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAGGTTACGGATGgaaaaaaatgtacaaaaacatATACAGAAGAAGATGTAGAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGctgcaaataaatttaatatcccACGAGCAACTTTGCAGTTTCGCCTATCCAACCAATTTGTCAAAAGTCGACCTGGTCCAGATACAGTTCTGTCTAGTACAGAAGAACAAGAGATAGTTAAATGGATAATTGCAGCTTGTAGTAAAGGATTTCCACGGCGTAAAGAGGATGTCATAAAGAGCGTCAAACTGTATTTAGATGAACATCCCAGACCAAACAATTTTATAGATAATACACCAGGCGAGGGATGGTATAAACTGTTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACATCAGAGGCTGTAACTTAA
- Protein Sequence
- MPKVTDGKKCTKTYTEEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKSRPGPDTVLSSTEEQEIVKWIIAACSKGFPRRKEDVIKSVKLYLDEHPRPNNFIDNTPGEGWYKLFLKRHPELSIRTSEAVT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01332562; iTF_01099779; iTF_01332561; iTF_01332563; iTF_00913545; iTF_00011897; iTF_00895845; iTF_00826888; iTF_00055346;
- 90% Identity
- iTF_00011897;
- 80% Identity
- -