Blac013320.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- clz9
- Assembly
- GCA_905147135.1
- Location
- LR990047.1:9875120-9876115[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-12 1.5e-09 38.4 0.1 4 42 18 56 15 59 0.90
Sequence Information
- Coding Sequence
- ATGGTGAGAAACTACAAACGAAAAACGACCAAGAGGTCATACTCTAAAAAAAAGCTGCAAGAGGCCGTACGTGCTGTACAAACGGGAAAATTAAGCGGCTACAAAGCCGCACAAATTTATAACATACCAAGGATGACCATCATGGATCACGTAAATCGTAAAAGATTTAAATCGAAAACTCTGGGACGCCCCACGACTCTGTCTGATGAGGTTGAAAAAAATCTTGCTTCATTACTACACCTAATGGAAAAATACGGATTTGGTCTTAGTAGACATGAAATTATGGAAATGGTTGGCGATTatgtgaaaaataataatttgacaaCGCCTTTCAAGGATGGTGTCTCAGGGATAGATTGGTTTCTTTTATTCAAAAAAAGGCACAATCTTGCAGTAAAAAAACCCCAAGGGGTAGAATACGCTCGGAAGAAAGCAGTCGATCCATTCATCGTATATCCATACTTTGACTTGCTTGAAAAGACAATTGATGAACTTCAATTGCGAGACAATCCGTCCGCAATCTGGAACTTGGATGAAACTTCTTTTTCGAAGGATCCCGAGAAAACGAAAACTGTGGGACTTAAGGGTCACGCTGCGACCAGACTTATCTCTTCACCAGGCAAAGACAACACCACTGTATTGCTCGGTGCAAGTGCTGCAGGAGATAAAACTCCACCGCTTATTATCTTTAAAGGCAAGAATATTTGGGACGAGTGGATTTCAACTCATGCGTACCCAGGCACTGCATATGCAGCGACAAAGAAAGGGTGGATGGAGACCGAGGTCTTCGAAAACTTTTTCAAGAAACAATTTTTGACAACTGTTGGCGAAATGCGACCcatattacttatttatgacGGACACTCAACGCATGTTGGGCTAAACATAATAGAAGAAGCGCGGAAAGAAAACATCACCATACTGAAACTTCCCCCACATACCAGTCATGTCCTCCAGCCGCTTGATGTAGCTGTCATGAAATCTTTCAAAGACTAA
- Protein Sequence
- MVRNYKRKTTKRSYSKKKLQEAVRAVQTGKLSGYKAAQIYNIPRMTIMDHVNRKRFKSKTLGRPTTLSDEVEKNLASLLHLMEKYGFGLSRHEIMEMVGDYVKNNNLTTPFKDGVSGIDWFLLFKKRHNLAVKKPQGVEYARKKAVDPFIVYPYFDLLEKTIDELQLRDNPSAIWNLDETSFSKDPEKTKTVGLKGHAATRLISSPGKDNTTVLLGASAAGDKTPPLIIFKGKNIWDEWISTHAYPGTAYAATKKGWMETEVFENFFKKQFLTTVGEMRPILLIYDGHSTHVGLNIIEEARKENITILKLPPHTSHVLQPLDVAVMKSFKD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -