Blac000542.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Blastobasis lacticolella
Gene Symbol
JARID2
Assembly
GCA_905147135.1
Location
LR990039.1:7134120-7154908[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-18 1.4e-14 55.3 0.1 6 89 722 802 718 802 0.90

Sequence Information

Coding Sequence
ATGCGGCCTGTGGCGACCCGTGGCGAAATGAGTAAAAGAAAGATTCAGGCGCAGCGCAAATTCGCGCAGGGGGCTATTATACCAACAACTCCAAATAATGTTGTTGTACGCAATGACATAggaattttaaatgtaaaagaaGACCAAAACATCATACACAGCAACCTTTCAGCTAAAAGCTTGCTGGATATAGTGtcatttcaatCGATTCATGCACATAAAAAACCAGTTGTTCTGTTAGAAAGACTAGAAAATAAACCTCTACAGGTTCCGAAACCTATGTGTTTGAGAGATCGTAACAATACAATTACGAAAAAAGTATTACCAACTAAATTGACCAAAAAGCCAGTTGTGGTCAAGAAACCTTTAGTAACCAAAGTGATACGTCAAAAACGTGCTTCTAAAACTGTATcgacagatgatgatgaaacaccTCTTAAATTTCTAAAAAAGGACTCTAACCAACGTCAGGCCTCTATGCCTAATAGACCGAAAACTCGTACATATGCTGAGTCCCTGGCTAGTCAATCTTCCATCATTATaaataagaagaaaaagaaagGCAATCATTTGAAGAATAATGCACGAGCAGTGAACCCCAATGCTATAGTATTATTAGCACGAAAGAAAAGTCTTCCAAAGCCTGAAGTCTCTAAATCTGTGCAACCAAATAATACTGTAAAGAAGGTCCATAACTCTAAAACAGGCAATCATTTGAAGAATAATGCACAAGCAGTGAAACCCAATGCTATAGTATTAATGACACGAAAAAAAAGTCATGCAAAGCCTGAAACTTCTAAATCTGTGCAACAGAGTAATTCTGTAAAGAAGGTCCCTAATACAAAAACAGTATCGAATGTCAAACGTGTCCAACGCGAAGAAACTACATCggaaaaagtaaaagaaaaacctagagaaaaaaaattgcctGATGACAAGATCGTAAACGGTGAAACAAAAGACGATTCGTCAGATTCTTCTGATGTTGGTTCAGATTTTAAACTAGTGTATAATGAATCAGAGTCAGGTGGTAACGGCGAACAAAAAATATCTTCAGGTAATTCTGGAACCTTAATACCTGATGAAAATATCCCTAATCATGACAAGAAAAAACCTCACAAGACGACAGAAGTAACGACTGCTATTGTCCACGTAAACAGTGGAGTTGATGATATTAAGACAGATTTAGACACAATACGTCCGGCCGAAAAGGAAGATGAACCAAAAACGGGTCAGTTTTACGGCAACACTGGTATAAGAACTTGGATGGATTCGGCGCGTCCGCACTGTGAGACAGAGATCGAACCTGAAAGTACAAAGAAACCCTGCGATGACGTGTATCAATTTGACCCCGAAATTGAGAATAGACCGTATTCCAAGTTTGAACGTAACAAGAAACCCGAAGGCCGTGTGTCATATTTGGATATATTACCGAAATCTAATCCATTTATCGTGCAAATGACGCCTGAAAAGAGCACcacaacaaataatattataatgaggGCTAAAATTGTGGACAGAAATGAGGCTTTGAACAATAATCACGATAATGTAGAGCGTAACGACAACCTAGAACAACTTTTAAATACGTTATCACGGAACAATAGCCAGATTGCACCCGAGATTAATCCGGAAATAGTCTGTATCGATGATAGCCAGAGTGCATCTGACGACGACGTTCAAATAGTTGAGGTAGCGTCTACCTCAAAAGCCGTCCCCGACTCCGGAGCGGCACCGCCCGCCGGCCGGTTGTTGGGCCAGCAACAGACTAAAGTGCCACCGGCGGTTACCAGCACTTTAACCCCCACCCCTGGCATTGCCGTACAGCTACCAAGTAACGTGACCCAGCATACAGACAGGTTGAATCAGCCCTCAGTTAGCAACGCCACTAAAGATACGCGACAAACACGATTCAAACCTCGTCCAAGTAACAAAAACAGCAATATTGTGGATGCTCCAGTATTCCATCCAACAGAAGAAGAATTTATGGACCCTATATCATTCTTTGAGAAAGCGATGACTATAGCTGCCAAGTTTGGGCTGTGCAAAGTGGTATCGCCGCCCAGCTTCAAGCCGACCTGTAAACAAATTGACGTTAATTTCCGAGTCATCAACCAATACATCGCGAGGATGTATAACCGCTGGGGCCCGGCAGCGCGTGAAATGGGCACCATCAAAGCCTATCTGTACTCTCAGAATGTGATCTTCACGCGACCGCCACTCCACGAGGGTTTGGAGTTGAACCTGCCGAAGCTGTACCGGCTGGTGCAGCGTCACGGCGGGCTCAAGCAAGTGATAGAGAAGAAACGCTGGTCGCGCGTCGCGGAGGAAATGCGATGCACCAAATTGCACAACTCAGACCGGCTGCTTGATAAGCTATACGTCAAGTATTTGTTGCCGTACGACACACTGTCTAACCTGGAGCGCCAACAGACAACGGCCGCCGTCGAGAAGTGTTGGAACCAAAAGAACCAGAAGCTTCTCGAGTGGGCTTTGAATCCGTTGCACAGACAGAAGAAACTGCTGGGCGAGTCGGATTCCTCGGAGGACGAGCCGGAACCCGACCCGCAGGTAGCGAGCGCGCTCGCCGACGCGGAGGACTGCGTCGTGCAGGGACGCTCCATGAACCTCGCGACTTTCGAGAAGGTCGCGAAGACGGCAATCGACACATTCTTCCCCACGCCGCCCCGTAGTCCGGCTGACGTCGAAGATATGTACTGGCGGACGATGTTGCTGGGCTCTGAGCATATCTGCGTGAACAGCGCTTCCATAGACACCGGCGATGCAGGCTACGGCTTCACGAAGGACCGGGACGAGCCTTTCGGCAGCCATCCGTGGAATTTGAAGATGTTCAGTGAGAACAGCGGGAATGTCCTGCGATCTCTTAACGCGGTACTGGGGGTGACCGTGCCCACGCTGCACCTCGGAATGGTGTTCAGCACCAGCTGCTGGCACCGCGACCCGCATGGACTGCCCTGGGTAGAATACATGCACAGCGGACCTTGCAAGATATGGTATGGAATACCGAACGAGCAGAGCTCGAACTTCCGCAAGGCGGTCGAGACGCTATGCCCCAGTTCCTGTCAGACCAAGTCCATATGGCTGCCGTCAGACGTCACTATGATCCCGCCGAACCTATTGCGCGAACACAACGTGTCACTGTCACGAGTGGAACAACACCCCGGCGAGTTCGTGATAGTGTTCCCGAAGGCGTACTCGTGTTCGATATCCACCGGGTACACGCAGTCGGAAAGCGTGTACTTCGCCACCAGCTCTTGGCTCAACAGCGTGCACCAGGTTTTCCAGGAGTTGCGTGATAGCTGTGAGCCGACCACGTTCTCGCTGGAGCAGCTTCTGATCGCGCTGGCGAAGGACACGCGCGCGCCCCTCGGGCTCCTACCGCAAGTCCACTCGAGCCTCAGCACGATCATCACTGAGGAGCTGAACAATCGCCGCCAACTCGTGGATCGAGGGTTGCAGTATCAGCGAGTGGCCAATTACCCGCCAACAAAGCGTTCGGGTGCCGCTTGGAATGTTCGAGACCTCGATGAGTGCGAGATATGTCGCGCCACGTTGTATCTGTCAAAGGTGACCGGTCTCACTGGGCGGCAATCCTCGGTGTGCTTGCAACACGCACTCAGGTTGCTGGACACCCCGCGACACAGCGCCGCGGAACCCGCACACCTGGAACTCCTAGTTGCCTACACAGACCACGAACTCATGGGCATCATCGTCACAGTACAGGACCGACTcttcaagtaa
Protein Sequence
MRPVATRGEMSKRKIQAQRKFAQGAIIPTTPNNVVVRNDIGILNVKEDQNIIHSNLSAKSLLDIVSFQSIHAHKKPVVLLERLENKPLQVPKPMCLRDRNNTITKKVLPTKLTKKPVVVKKPLVTKVIRQKRASKTVSTDDDETPLKFLKKDSNQRQASMPNRPKTRTYAESLASQSSIIINKKKKKGNHLKNNARAVNPNAIVLLARKKSLPKPEVSKSVQPNNTVKKVHNSKTGNHLKNNAQAVKPNAIVLMTRKKSHAKPETSKSVQQSNSVKKVPNTKTVSNVKRVQREETTSEKVKEKPREKKLPDDKIVNGETKDDSSDSSDVGSDFKLVYNESESGGNGEQKISSGNSGTLIPDENIPNHDKKKPHKTTEVTTAIVHVNSGVDDIKTDLDTIRPAEKEDEPKTGQFYGNTGIRTWMDSARPHCETEIEPESTKKPCDDVYQFDPEIENRPYSKFERNKKPEGRVSYLDILPKSNPFIVQMTPEKSTTTNNIIMRAKIVDRNEALNNNHDNVERNDNLEQLLNTLSRNNSQIAPEINPEIVCIDDSQSASDDDVQIVEVASTSKAVPDSGAAPPAGRLLGQQQTKVPPAVTSTLTPTPGIAVQLPSNVTQHTDRLNQPSVSNATKDTRQTRFKPRPSNKNSNIVDAPVFHPTEEEFMDPISFFEKAMTIAAKFGLCKVVSPPSFKPTCKQIDVNFRVINQYIARMYNRWGPAAREMGTIKAYLYSQNVIFTRPPLHEGLELNLPKLYRLVQRHGGLKQVIEKKRWSRVAEEMRCTKLHNSDRLLDKLYVKYLLPYDTLSNLERQQTTAAVEKCWNQKNQKLLEWALNPLHRQKKLLGESDSSEDEPEPDPQVASALADAEDCVVQGRSMNLATFEKVAKTAIDTFFPTPPRSPADVEDMYWRTMLLGSEHICVNSASIDTGDAGYGFTKDRDEPFGSHPWNLKMFSENSGNVLRSLNAVLGVTVPTLHLGMVFSTSCWHRDPHGLPWVEYMHSGPCKIWYGIPNEQSSNFRKAVETLCPSSCQTKSIWLPSDVTMIPPNLLREHNVSLSRVEQHPGEFVIVFPKAYSCSISTGYTQSESVYFATSSWLNSVHQVFQELRDSCEPTTFSLEQLLIALAKDTRAPLGLLPQVHSSLSTIITEELNNRRQLVDRGLQYQRVANYPPTKRSGAAWNVRDLDECEICRATLYLSKVTGLTGRQSSVCLQHALRLLDTPRHSAAEPAHLELLVAYTDHELMGIIVTVQDRLFK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-