Blac025538.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- retn
- Assembly
- GCA_905147135.1
- Location
- LR990058.1:10957656-10969389[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-19 1.5e-15 58.4 0.0 18 89 85 154 74 154 0.94
Sequence Information
- Coding Sequence
- ATGGGCGGCCGGCGTCCGCGCGCGGCGCCACCCGATTGGCCGCCCGCGGGGGTCCGCCAAGGTGTTGCACTTGACTTCTCCGCGTATAAATACCAGTTAGTACCGTTCCAACCGGACTCCTCGCCGGAATACGTTCCAGGAAATCGTAACTCGGCGGCGTGCCGTGCAATTGTCGCCGTGCGAGAGACGCACGCGCAGCCACTTCAAAGCTTGACGGTATCAACCGGCGACCAGTGGGGGTTGACCTCTTGTACACCCATCAACCGTCTTCCAATAATGGCCAAGTCAGTGCTTGACCTGTACGAGCTCTACAACCTGGTGATCGCCCGCGGCGGTCTCGTTGAGGTTATCAACAAGAAACTTTGGCAGGAGATCATCAAAGGACTTAGGCTGCCGTCCTCTATCACATCTGCGGCTTTCACACTGCGCACACAGTATATGAAGTATCTCTACGACTACGAGTGCGAGAAGAACCACCTGTCCACCCGCACCGAGTTGGACGCGGCCATCGAAGGGAACAAGCGTGAGGGACGCCGCGCCTCCGGACAGTACGATGCTCAGGCCGCGCTGGCCATGCCGCCGTTGAGCCGCGGAGTGCCAGCCTCCTTGGCCCAGCTGACGCAGCACATCCAGCCGCTGTCGCTCGCGATGGGCGGCGCGATGGGCGGCGCGGTGGGCGCGGTGCCCCGCCTGCCGCCGATAGCTCCACACACACAAATGGCCCAACACGAGCTGGAGTTCCGCGTGCGGGAGTACGTGAAGATGTTCCAGCAGACGCAAATGCTCAGAAATGGTTCAGAATCCCCGCCGAACCCCAATCCGACCATGATCTCTCCGCGCGACGCCATGGCCGCCGTCGACGCATCCCGGCTCGCTCTCTGGTCGatctacaacaacaacaacgccAGCCCTCCGCAGATGGCTGACCTCGAGCCACAACGCGAGGCGCTGAACCTCAGCGAGAGTCCAACTTCGAGCCACTCCGGAGGGGTGAAGCGGGAGCGGGAGCCCAGCCGTTCTCCACTACCAGCCCCCAAGAGGCGCACGCCAAGGCCTCCCTCCCCCTCCCCTACCCGCGCCCCCACCCCGCCCTCGCCCCGCGCCGGCACCGCGCCCGCGACCCGCACGTCGCCCCCGCCTACTGAGGAAGAGGGCCCGACAACAATCAACTGCGTAGGACTCAACGGGACCTCGTTCAAGGTCACCAGTGAAACTACCAGGGATGTAGAGACGGGCGATCCGCAGCTCACAGTCTCCATAGAAATTAATGGCGTCAAATACGAGGGCACATTATTCCGGCAAAACAGGAATGGACAAAACGGCCATCGGCAGATGGTGTCCTAA
- Protein Sequence
- MGGRRPRAAPPDWPPAGVRQGVALDFSAYKYQLVPFQPDSSPEYVPGNRNSAACRAIVAVRETHAQPLQSLTVSTGDQWGLTSCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKNHLSTRTELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLTQHIQPLSLAMGGAMGGAVGAVPRLPPIAPHTQMAQHELEFRVREYVKMFQQTQMLRNGSESPPNPNPTMISPRDAMAAVDASRLALWSIYNNNNASPPQMADLEPQREALNLSESPTSSHSGGVKREREPSRSPLPAPKRRTPRPPSPSPTRAPTPPSPRAGTAPATRTSPPPTEEEGPTTINCVGLNGTSFKVTSETTRDVETGDPQLTVSIEINGVKYEGTLFRQNRNGQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00207648;
- 90% Identity
- iTF_00207648;
- 80% Identity
- -