Basic Information

Gene Symbol
Kdm5
Assembly
GCA_905147135.1
Location
LR990062.1:3003543-3042185[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-24 5.7e-21 75.8 0.0 2 89 89 172 88 172 0.93
2 2 9.2 2.9e+04 -3.4 0.0 45 64 1323 1343 1311 1356 0.67

Sequence Information

Coding Sequence
ATGGGGGACTCCGCGTCCCCCATGAAACCGGATAATTTCACGTTCACGGTGCCGCCTGAGGCTCCCGTGTTCGAGCCCACGCCTGAGGAGTTCCTGGACCCGCTTGCGTACATCAACAAGATCAGGCCCATCGCTGAAAAGTCCGGGATATGCAAGATCAAGCCCCCAGCCCATTGGCAGCCTCCATTTGCTGTGGATGTGGACCGTCTTCGGTTCACACCTCGGATACAGAGGCTGAACGAACTTGAGGCGATCACACGAGTGAAGCTAAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTCCAGGGCTCTGTGTTGAAGATACCTACCGTGGAGCGCAAGCCACTGGACCTCTATGCGCTGCACAAGATTGTCAAGGAAGCTGGCGGTTTCGAGGTGTGCTCCGCTGAGCGCAAATGGTCGAAAATTGCGCGGCGCATGGGCCACCCGCAGGGGAAGGGCATCGGGTCCATACTGAAGAACCACTACGAGCGGATACTGTACCCGTACGACCTGTTCAAGAGCAGCGGCGTCGTCGAGAACAAGGAGACGAAAGTGGACGTGAAAGGTGAACAGACACCAGAGAAGGCCCGGCGCTCCGCCCCCAAGCCGGCGGccacgccgccgcccccgcgccgaTACAAGCCCGAGCCTGAGCCGTTGGCTGAGGGATCCCATACGGAAGCCCTGGCCGCTGGGGACAAGACACCGGTGAAGGTTAAGGAGGAGAGCCCGGAGACTAGACGGAgtCCCCGCGAGAACAAATGGGCGGGCGGCGCCTCAGCTGCGCGTTGCGGCTCGCTCGGGCTGGCGCGGGTCACGAGATCCACGCGCCTGCGAGAGCACCGCATGTCCAACATGACCGTCTCGGTGACCCCCGCGCCGCCGGTCATCCCGGGACATGGGTTGCCTGCTCTGAGTCCTGATGATCCGCTGGCCAAGTACATGTGTCGCGTGTGCGGGCGTGGCGACGTGGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCCTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGCGGTGCCCGGTCTGCATCGCTGAGGAGGTGTCGAAGCCGACGGAGGCGTTCGGGTTCTCGCAGGCGACGCGCGAGTACACTCTCCAGCAGTTCGGCGAGATGGCCGACCAGTTCAAGTCGGACTACTTCAATATGCCCGTGCATATGGTGCCAACGGCGACTGTGGAGAAGGAGTTCTGGCGGATCGTGTCTTCCCTCGACGAGGACGTCACTGTGGAGTACGGGGCGGATCTCCACTCTATGGATCACGGTTCCGGGTTCCCGACGAAGTCCTCGGCGCACCTGTACCCAGGCGAACAACAGTATGCGGAGTCCAGCTGGAACCTCAACAACCTGCCCGTGCTTGACGGCTCCGTGCTGGGACACATTAATGCTGACATCTCCGGGATGAAGATCCCGTGGCTGTACGTGGGGATGTGCTTCGCGACGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTATATGCACTGGGGCGAACCCAAGACCTGGTACGGCGTGCCTGGTTCCAAGGCGGAGCAGTTCGAGGCGGCGATGAAGGCAGAAGCGCCCGAGCTTTTCCAGTTGCAGCCGGATCTTCTGCACCAGCTCGTCACCATCATGAACCCCAACGTACTCATGAAGGCCGGCGTGCCCGTCTACCGATTGGACCAGCACGCTGGCGAGTTCGTGATAACGTTCCCGCGTGCCTACCACGCGGGATTTAACCAGGGCTACAACTTCGCCGAGGCTGTAAACTTCACGCCTGCTGACTGGTTGAAATCCGGCCGCGAATGCGTGCTTCACTACTCGACATTGCGGCGCTACTGTGTGTTCTCGCACGACGAGTTGGTCTGCAAGATGGCGTTGGAAGCGGACTCGCTGGGGCCCACCGTGGCCTTGGCCGCCCATCGGGATATGAGGGCCATGCTGCATGATGAAAGGAAGCTTAGGAAGGGGCTGCTGGATTGGGGCGTAACGGAAGCCGAACGCGAAGCCTTCGAGCTACTACCTGACGACGAACGCCAATGCCAACTCTGCAAGACCACCTGTTTCCTGTCCTGCGTGACCTGCGCCTGTGGGACAGCTGTGGCTTGCCTAAGGCATTACGATAAGCTGTGCGACTGCCCGCCGGAGAGGCATAAACTGCGGTACCGCTACACATTGGACGAGTTGCCGGCGATGCTGGAGCGGCTGAAGCGCAAGTCGGAGCAGTTCCGCGGCTGGGCGGCGGCCGTGGCCAACGCGCTGGACCCGGACACGCCCAAGACCTGCGACCTGGACGGGCTCCGGGCGCATCTGAGGAAGGCGCATGATCTCAAGATGCACAAGACAGAACTAGTCCGCGCCCTGGAGACCGGCATCGAGGACGCCGAGAAGTGTCTGTCGGTGATCCAGCAATTGGATCTGAACAAGATGCGGACAAGGACGAGACACCACGACCCGAAGTACCGGCTGAGCGTGCATGAGCTTACGCTGTTTGCGGCGGAAATCGATCAGCTGGCTTGCGTTTTGCCTGAggGTTCAGCAGTGAAGGAGGTTCTGCGCCAAACAGCTGAATTCGAAAACAAGGCGGCCGATATCCTCAGTCAAGACCTGGAGATGCCCGATCCCGCCTCGCTACGGGAGTTGGAGGAGGTAGTAGACCTAGGCTCGCGTCTCTGCATAGTGCTCCCCCAGCTGGGCGGGCTCCGCGCGAGGCTCGCGCAGGCGCGCTTGCTCGCTGACGTCAGGGCCCGCCGCGCTGACGCCGCCTCGCTGACGCCCGCCGCCATTGACAAGCTACTCGCTGACGCCGCGTCTGTGGTGCCCCACCACCGGATAGAGACCGAGAGGGCGTTGCTGTTCAAGCTGAAAGCTCAAGTAGAAGAATGGGAAGGCCGCGCTCGTCAGCTACTCGTCGACCCTTCCAAGCTACTCGCCGACGACCCCGAGCCGAACTACACGACGGTGGCCGAAGTGGAAGCGTTACTCGCCGACGGCGACGAGATCGACGCTGCCTTGCCTTCCTACCACGCGTTGCAGACAGCCGTGACACACGCTAAGGATTGGCTGGCTAAGGTGGAGGAAATGCAACGCCTCGAGCTATACCCGTACCTGCACAGCGTGGAAGCCGTGTggcggcgcgccgccgccgtcccGCTGGCCCTGCTGGAGCGGGCCCAGCTCGCCCGCGCCGTCAGGGACGCTGCCGACTGGCGACAGGGCGCTAGGGACATGTTCCTTAAGAAGCTAGCGGCCTTCCCACTAGCTTTGTTAGAGCGGGCCCAACTCGCCCGCGCCGTCAGAGACGCTGTCGACTGGCGAGAGGGCGCTAGGGACATGTTCCTTAAGAAGAACTGGGCCTACTCCCTTCTCGAGGCCCTGTCCCCCCGGACCGAggcccccgccgcccgccgccggcccCGGGCCGCCAACACACCGTCTGGATCAGAGCCCCCACCCTCCTCATTGGAGGCGGGTCTGTTCCTCCGTAACTTCAGCGAGGAGTCCACGCCCACGGAGATCGTGGCCGCGTTCAAGCAAGCAGAGCAAAGGGAGTTGGCGCTCGTTAAGGAACTCAGGGCCCGCAACAGTCGCAAGGAGgtccgcggcgcgggcgcggcggcggcggccgttTTCTGCGTGTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTATGCAAGGACTGGTTTCATGCATCCTGCATAGCGGGCTGGGGTTCCGAGCGGTCCGAGTCCCCGGACGGGGCTGCCGGGGCCGGGGCCGGGGCCGGGCCGGGGGCGGAGGCCCGCGCCGGGGCCGATTCCAAGTTCCTGTGCGCGGACTGTACGCGGACCAAGCGGCCCAGCCTTGACAGGATACTGGCTTTACTGGTGTGGCTGCAAAAGCTCCCAGTGCGATTGGCCGAGGGCGAAGCCCTACAGTGCGTGACGGAACGTGCCATGGCGTGGCAGGAGAGCGCCAGGGCTCTGCTCGCGGCCCCGGCCTTGCAGGCACTGCATCAGGCTAGGCATCATAATATGGCAAATAGAGAGAAGTCAGACAAACTGAACGCGGAATTGAAGAAGGCGACGGGGCGCGCGCACGAAGCACACGCCTCGCAAAATTCCAGGTCGTCAGCGTCCGTGGAGCACGCGTACAGCGCGACTCCGCGGGGCGGGGGCggtgcgggcgcggcggcggcgcgggtgTCGCCCGCCCTATTACAGAAACTGGAGGACTTGATGCTGGAAGGGGATTTGCTTGAGGTCTGTCTCGAAGAGCAATCCCAAGTGTGGGCCAGCGTGGtggccgcccgccgcgccctgGGAACCGGCGGGGGGGGCCGCCACCAATGGGGACGGGCGGCGGTCCGTCCGCGCGGGGGAGCCCCCCCGCCGGAAGCGAAGACAGAGACAGCCCCCCCCTCACACGCAGATGAAGAGGACTCGGCCGCATCATGCTGTCAGAACGGTCGACCCGCACCCAAGACCACGTTAAAACGGGGATCAGCGACAACCACAAATTACTTGAATAGGAAACAGGGCCTGTCATCGACATCAGGGCTGATGATGCGTGCCCACTACATGGCGCGGCAGGAGCGCCGCCGCGGGCTGGCCGCTCGCGGCCGCGGACTGCGGCAGCCACGCAGCGGTACCTcccgcgcggcggcggcgtctcGGCGTTCCCGCAGCCGCAGTAGTTCCGGCTCCAGCGAgggtgatgacgatgattgcGCCGCGAATGATTGCCTGAGGCCCACTGGCAAAGAAGTGGACTGGGTGCAATGCGACGGTGGTTGCGACCAATGGTTCCACATGCACTGCGTTGGCCTGGCCCCGGGGGCCTTACGGGAGGACGACGACTACTTCTGTGGACAATGCGAAGGAAGGCGGAGGGGGGAGCCCCCCGTAACCGCCCCCCAGACGGCAACAGAGCCCGCACACTGA
Protein Sequence
MGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYINKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDLFKSSGVVENKETKVDVKGEQTPEKARRSAPKPAATPPPPRRYKPEPEPLAEGSHTEALAAGDKTPVKVKEESPETRRSPRENKWAGGASAARCGSLGLARVTRSTRLREHRMSNMTVSVTPAPPVIPGHGLPALSPDDPLAKYMCRVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCIAEEVSKPTEAFGFSQATREYTLQQFGEMADQFKSDYFNMPVHMVPTATVEKEFWRIVSSLDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLDGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKSGRECVLHYSTLRRYCVFSHDELVCKMALEADSLGPTVALAAHRDMRAMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCACGTAVACLRHYDKLCDCPPERHKLRYRYTLDELPAMLERLKRKSEQFRGWAAAVANALDPDTPKTCDLDGLRAHLRKAHDLKMHKTELVRALETGIEDAEKCLSVIQQLDLNKMRTRTRHHDPKYRLSVHELTLFAAEIDQLACVLPEGSAVKEVLRQTAEFENKAADILSQDLEMPDPASLRELEEVVDLGSRLCIVLPQLGGLRARLAQARLLADVRARRADAASLTPAAIDKLLADAASVVPHHRIETERALLFKLKAQVEEWEGRARQLLVDPSKLLADDPEPNYTTVAEVEALLADGDEIDAALPSYHALQTAVTHAKDWLAKVEEMQRLELYPYLHSVEAVWRRAAAVPLALLERAQLARAVRDAADWRQGARDMFLKKLAAFPLALLERAQLARAVRDAVDWREGARDMFLKKNWAYSLLEALSPRTEAPAARRRPRAANTPSGSEPPPSSLEAGLFLRNFSEESTPTEIVAAFKQAEQRELALVKELRARNSRKEVRGAGAAAAAVFCVCQKRQYGVMTQCELCKDWFHASCIAGWGSERSESPDGAAGAGAGAGPGAEARAGADSKFLCADCTRTKRPSLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQESARALLAAPALQALHQARHHNMANREKSDKLNAELKKATGRAHEAHASQNSRSSASVEHAYSATPRGGGGAGAAAARVSPALLQKLEDLMLEGDLLEVCLEEQSQVWASVVAARRALGTGGGGRHQWGRAAVRPRGGAPPPEAKTETAPPSHADEEDSAASCCQNGRPAPKTTLKRGSATTTNYLNRKQGLSSTSGLMMRAHYMARQERRRGLAARGRGLRQPRSGTSRAAAASRRSRSRSSSGSSEGDDDDCAANDCLRPTGKEVDWVQCDGGCDQWFHMHCVGLAPGALREDDDYFCGQCEGRRRGEPPVTAPQTATEPAH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00207645;
80% Identity
-