Badu026370.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- ZFX
- Assembly
- GCA_907269095.1
- Location
- OU026140.1:11536510-11549854[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.051 4.8 8.7 1.0 1 23 440 463 440 463 0.94 2 10 9.7 9.2e+02 1.5 3.2 2 23 471 492 470 492 0.96 3 10 0.14 13 7.3 0.3 1 23 496 519 496 519 0.94 4 10 0.3 28 6.3 3.1 1 23 527 549 527 549 0.98 5 10 0.0014 0.13 13.6 0.9 1 23 552 575 552 575 0.97 6 10 3.3e-05 0.0031 18.7 0.9 2 23 582 604 581 604 0.94 7 10 0.017 1.6 10.2 0.4 1 23 615 637 615 637 0.95 8 10 4.6e-06 0.00043 21.4 4.2 1 23 1034 1056 1034 1057 0.95 9 10 1 97 4.6 4.7 2 23 1064 1082 1063 1082 0.74 10 10 0.62 58 5.3 0.0 2 23 1089 1111 1088 1111 0.94
Sequence Information
- Coding Sequence
- ATGAACGCCGAGAAATTAGATACAATGAACATGGATCCAGAATCCAGTGAATATCTGTGTATCTGCTGTTTTAGCAAAGCTGGCGAGTTTGTCAAATTATCGAACTGTAAACACAGGAGCTTTTTTGATAATATAACCATAAAAGATCTCCAAGGCACTAATGTAATGAAGGTCCCTGTAAGATTTAAACAGAGCAAAACTTATACAGCGGCGTTCATGCCCGATTCACCTGTCGGCATGCCTGTCATCACATCTGTAATGTCATACAATACACAAGGAAAAGACAAGGAAGTTGCCAAGGGGCCCGTTGTAGTGCCCAGAGACAATACTCCTAGTATTGGAGTCTTTAATAAGAATAGACAACTGATACTGGTACCTAAAAGTGATGACCACAGAATAATAGCCATGCGACCACAGACTATGGCCGACCCCAGTAGTGACACTCCTAGTAGTCTTCTCTTCAACCCCAAAGAACTACAATTTAAAGTACCCAACAGCGTTGGACACAGCCAAGTAAGCAACACAAATAACCTAAAACTACAAGTACAACACAACTCAACTGTGAGTAATAACAAGTTGCTGTCACGGTTGCTACAAGGAGGTGGACAGAGCAATGCTAAAACAATTACTAATCCACCAGTCTCCAGCAGTCTCTTTTTAAATATCAGCCCATTGACAACGCAATCTGATGTGGGGAAGTTACAAGGAGGTGGACAGAGTAAAATCAATGCCACAACAGCTAATCCTCCAGTATCCAGCAATCTCTTTTTAAACATAAGCCCATTGACAACGCATTCCGATGTGGGAAAGTTGATACAAGCGACTGGAGGCGTTGGACAGATCCAAAAAAGCAGTGGCTACCAACAAAGTAGTCAAATCACGTCGCATGATGTTACAAATAGTCGCCGACGGCTCGCACTGAATCAGCAGGTCGAACAGCTGATTGAATCCATGATTAGTGGCCCCGGTGTTCAGTCAAGTAGTGCCTTAAGTCGATGCACTAATAACAAAAGTCCAATTTCTGAAGTCACCAACGTGAAAGTGAAAATAGAAGATGACAGTGATACTGAGGACGACGATGGTCAGGAAACCCAAGCAGTAGGCGTCAGTGAGAACCTCTACGATGGTAAAGATGGGGTTAAAGTTGAGATAGTTGAGGTTCCAGTCGAGGTGGATAAGAAAACTGGGAGTGCTGAAGAGGAGTCAGAAGTTACATTTCACTATGGAGCTAATATATTAGGGAAGACGTTATCTGAAGAGGCAGTCAAGATTGAGAGGGAAGCAGCTAGACAGAGCGACTCGTATCAGTCTTTGCCATACAAATGTGAGACCTGTGTCGAAGCCTACAGGTTCGAGAATGGACTGAAAAGACATAATAAGCTGCGACATAAAGTGACGCCTGGAGGGAAGACATGTAATATATGTAAATCTATCCTTAAAAATGAACTGCGTTATGTACATCACATGAAAAAACATTTAAAAAGGTACGACTGCAAAACCTGCGACCAGCGGTTCCCAGTGCTCAAGGATGCAGTCGAACATTACAACAGCACGCACTGGGAAGGCGCCCGGGCCGAGTTCAAATGCCCCAAGTGCGATTATAAGTCCATGATCTTCAATGAGTACCGCAAACACAAGAACACCCATCGCAAGTACACCTGCAAGGAGTGCGGCGAGAAGCTGCACTCGAAGGCGGACTACCAGGCGCATATCACATCGCTCCATAAGAAGGATGAGATGCTTAGCTGTGACGAATGCTCAAAGGTGTTCAAGAACCAGCTCTACCTGACCCGCCACCAGAAAGCGATGCATAGCCGCGGCGGCTCCGACCCGGACCGGTCGTACTACTGCGCGCCATGCGATAAATTCTTCTACAACGAGTACACTCTCGTCGGCCATCAGGAAACGCATGCGGCGCATGTGGGCGGCGACGCTAAGAAGGAATATGTTAATAATGTAATTTCTAAGAGCAAAGATAATATATCTAAAAGTATTTGGCGGGCAATTGCTACCGAGACGTGTATGCAGAAAACAGGAGGCGGTGCCCTGGATGTGTTGGTGCAGAATGTGCCCGGCGGCGGCGACGCGGAGCGCGCCGCTGCCGCCGCCGCAGGGCTCAACCACTACTACATTCAGGCAAACAACAATGACGCATCGAAGCCACATCTCAGTCAGGCTTCTGTGTATGTTGATCGATACCTTTCTACAGCTCCACCCACCTTTGTGTTTCACCCATTCACTTTGGATGAGTTCGCATATCAGCGAGGGCGGTCCACGGGTGAGGCCGTGCGCGACGTGGTGACGCGCGTGACTGGCCACCTCGAGGGCGGGCGACAGGTCGCAGCGATATTCTGTGATCTGTCGCGCGCCTTCGAGATGGTGGACCACCAACTGCTGTTGAGTAAACTCTATCGGTATGGTTTCCGCGGATCATTCTATGACACATTGTCATCATTCTTGACGGACCGGAAACAGGCAACCTATGTAAACGGATCGGGATCCGACCTTGAGTGCATCGTGCCGCAAGTCGATACGGTGAAGTACTTGGGTCTAGTCCTTGATGCGGGCCTGACGTGGTCAGCGAATATCGAGTCGCTGTGCGATAAACTGGCATCTGCCTGCTATGCGCTATCCAGACTGCGCCAAACCCTGTCAGCGGAAAATTTGAAAAAGGCGTACTACGGATATTTCCATTCCCTCCTAACCTATGGGATAGACCTGTGGGGCGTAGCTGCGGACCGCGAACGCGCGTTCAAACTGCAAAAGCGTGCTGTACGGATTATTGCTGATAAGCCCCATGACTTTCCAGCTCAGGAGTTGTTCCGAGAGTTAGGCATTTTGACTCTGCCAAGTGCATATGTACTGGACATGTGTAACCAAGTCAAACGCAACATTGACGAGTTCCCTACGCTGGGTGACAGTCACAGTCGCAGCACTCGCAACCGTGAGCTGCTGAGCGCGCCGCGGTGCCGTCGCACCAAAGCGCGGCGGCTGCTCGCGGTCGCGGGCCCGAACCTGTATAACGCCCTGCCGCAGGACGTGAAGGATGCACCGAGCCTAAGTGCCTTCAATAAAAGATTAAAAAAAATGTTAATCAGGTTCGAATGCCACGACTGCGGGCGAAAGTTCCGGGGGAAAGGCGACCTCAAGAGACACATAATGTTTCACCACCTCGACGCCAAGCCGTTCAAGTGCCAGCACTGCGGGAAAACCAACGCGCTCCTAGCGACACACATCCGCACACACACGGGCGAACGGCCCCTCCAATGCGACCTTTGTCCCGCGACATTCGCTGCCAGCGCCGCTCGCTACAACCACCGGAGACTCGTGCACAAGGTCCCCAAGCTGGATAAGAAGGTCCCCAAGCCTGTTAGGAAGGTCCCCAAAGTGGTTAAGAAGTTTCCCAAGGTGGATAAGGTCCCAAAGCAAGATAAAAAGGTAGTAAAGAAGGTCCCCAAGGTGGATAAGGTCTCCAAGCTGATGGTTCCCAAGATTGTTAAGAAGGTCCCAAAGCTGAATAAGAAGGTCTTAAAGCTGGATAAGAAGGTCCCAAACCTTAAAAAGAAGGTCCCTAAGCTAGGCAAGGTCGCCAAGCTCGATAAGAAGGTCCCCAAGCTGGATAAGGTCACCAAGCTGGTTAAGAAGGTCCTCAAGCTGGTTAAATAG
- Protein Sequence
- MNAEKLDTMNMDPESSEYLCICCFSKAGEFVKLSNCKHRSFFDNITIKDLQGTNVMKVPVRFKQSKTYTAAFMPDSPVGMPVITSVMSYNTQGKDKEVAKGPVVVPRDNTPSIGVFNKNRQLILVPKSDDHRIIAMRPQTMADPSSDTPSSLLFNPKELQFKVPNSVGHSQVSNTNNLKLQVQHNSTVSNNKLLSRLLQGGGQSNAKTITNPPVSSSLFLNISPLTTQSDVGKLQGGGQSKINATTANPPVSSNLFLNISPLTTHSDVGKLIQATGGVGQIQKSSGYQQSSQITSHDVTNSRRRLALNQQVEQLIESMISGPGVQSSSALSRCTNNKSPISEVTNVKVKIEDDSDTEDDDGQETQAVGVSENLYDGKDGVKVEIVEVPVEVDKKTGSAEEESEVTFHYGANILGKTLSEEAVKIEREAARQSDSYQSLPYKCETCVEAYRFENGLKRHNKLRHKVTPGGKTCNICKSILKNELRYVHHMKKHLKRYDCKTCDQRFPVLKDAVEHYNSTHWEGARAEFKCPKCDYKSMIFNEYRKHKNTHRKYTCKECGEKLHSKADYQAHITSLHKKDEMLSCDECSKVFKNQLYLTRHQKAMHSRGGSDPDRSYYCAPCDKFFYNEYTLVGHQETHAAHVGGDAKKEYVNNVISKSKDNISKSIWRAIATETCMQKTGGGALDVLVQNVPGGGDAERAAAAAAGLNHYYIQANNNDASKPHLSQASVYVDRYLSTAPPTFVFHPFTLDEFAYQRGRSTGEAVRDVVTRVTGHLEGGRQVAAIFCDLSRAFEMVDHQLLLSKLYRYGFRGSFYDTLSSFLTDRKQATYVNGSGSDLECIVPQVDTVKYLGLVLDAGLTWSANIESLCDKLASACYALSRLRQTLSAENLKKAYYGYFHSLLTYGIDLWGVAADRERAFKLQKRAVRIIADKPHDFPAQELFRELGILTLPSAYVLDMCNQVKRNIDEFPTLGDSHSRSTRNRELLSAPRCRRTKARRLLAVAGPNLYNALPQDVKDAPSLSAFNKRLKKMLIRFECHDCGRKFRGKGDLKRHIMFHHLDAKPFKCQHCGKTNALLATHIRTHTGERPLQCDLCPATFAASAARYNHRRLVHKVPKLDKKVPKPVRKVPKVVKKFPKVDKVPKQDKKVVKKVPKVDKVSKLMVPKIVKKVPKLNKKVLKLDKKVPNLKKKVPKLGKVAKLDKKVPKLDKVTKLVKKVLKLVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -