Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026140.1:2947483-2963642[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00069 0.065 14.6 1.0 1 23 214 236 214 236 0.98

2 11 0.007 0.66 11.4 1.2 1 23 243 265 243 265 0.95

3 11 1.2 1.2e+02 4.3 1.5 3 23 271 291 271 291 0.91

4 11 0.017 1.6 10.2 5.3 1 23 296 319 296 319 0.98

5 11 0.011 1 10.8 0.9 1 23 323 346 323 346 0.93

6 11 0.0033 0.32 12.4 0.3 2 21 359 378 359 383 0.93

7 11 0.064 6 8.4 0.9 2 23 430 452 429 452 0.96

8 11 0.00012 0.012 16.9 1.8 1 23 469 491 469 491 0.96

9 11 0.00016 0.015 16.6 0.6 1 23 497 519 497 519 0.97

10 11 1.7e-07 1.6e-05 25.9 0.4 1 23 526 548 526 548 0.98

11 11 0.024 2.2 9.7 4.9 1 21 554 574 554 577 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00069	0.065	14.6	1.0	1	23	214	236	214	236	0.98
2	11	0.007	0.66	11.4	1.2	1	23	243	265	243	265	0.95
3	11	1.2	1.2e+02	4.3	1.5	3	23	271	291	271	291	0.91
4	11	0.017	1.6	10.2	5.3	1	23	296	319	296	319	0.98
5	11	0.011	1	10.8	0.9	1	23	323	346	323	346	0.93
6	11	0.0033	0.32	12.4	0.3	2	21	359	378	359	383	0.93
7	11	0.064	6	8.4	0.9	2	23	430	452	429	452	0.96
8	11	0.00012	0.012	16.9	1.8	1	23	469	491	469	491	0.96
9	11	0.00016	0.015	16.6	0.6	1	23	497	519	497	519	0.97
10	11	1.7e-07	1.6e-05	25.9	0.4	1	23	526	548	526	548	0.98
11	11	0.024	2.2	9.7	4.9	1	21	554	574	554	577	0.83

Sequence Information

Coding Sequence: ATGCAGGATACAGATTATGGAATGCTATCTCACCTTTGCTGGGAATGTAGCTACAGATTACACAATTTTCATCGGTTCAAAACCAAAGCTCTTCAAAGCTATCATCTATTGAAGGAAATACTACGAACAGAATCTTACATCACAAGTCAACTGCTCAAATGTATTGACCGTCACACGAACGGATTGGCGTCCAGTCTAAACAAGCAAGTTATAGATCCAGAAACAGATGTTTACTTCTGCGAACCCATCACATTGAAAAGTGAAGAAGTGGCGAATGTACTAAGTGATGTTAGTGTACAAGAGTTGGAACTGAAATCCGAGAAAGAAATTATAGATACTCCAGTCGTAAGCAACGATTTAGTAAAGGACGAATCTAGTGATAGTGACTTGAACAACGACGAAATTTTATCAGCCAACGACGAAACAGATGAGGAATACGAGGCACCTAAATCCAAAGTAAAACGAATTAAAAAGCCGGTGAAAAAAAGTCTCAAGGTGCAAAAGAAAGTCGATAAAAGGCTCAGACCATTGCACGAAGCAGTCAACGAAGAATTGTTCACAATAACATTGTTAAGCGAAGAAGAACAACTGTTAGAATTGCAAAAGAGGAAAGAGACGTCTAATTACAAGACGACAAAATATCAATGTGAGATGTGCTATAAAGGATTCAAGGAAGTGGAAGCTTACAAGTCTCATATGACCAGGCATACAGATAGGTGGGGCCCCCACAAGTGTCCCATATGCCACCTGCGGTACGCGTCGAAACGCGAGGCGAAGGCCCACGGCGCCTCGCACGCGCTGCGGCTCGGCTGCAAGCAATGCGACTATGTTACCACTGTCAGACATGCAGCGAAGCGCCACGAAGACTTCCACAAAGGCACCACCTACAAATGTCCTCACTGCACAGAAGAATTCTGCAAATACACAACGTACCTCGGCCATCTCAGGATAAAGCACCCGTCGGACTTCGTGTGCGAACTCTGCGGGTACTCGTTCGTCAGTCTCAAGGGGAAGAATATGCACAAGAAGCTGAAACATCGCTTTGAGAATCGACAGATTTCAGAGAATAGTCCCTACTGTGAGAAGTGCGATGTACGATTCGCGTCCGAGGAGGCCTTACAGACACATCTGAAGCTTTCTTCCAGACACAAAGATCCTATCGAAACAGAAGTGATAATAGAACTGTCATTTTCTCTCCTATCCAGCGAAGCGTTGGAAGAGAGCGAGAGAAAGAGACGGAAACCCAACACTGCCAGAGCGAAAACTATGGAGTCGAGCGGTCCCATCAAATGTGAACAGTGCGACACCCAGCTGCCAGACGCGCGTGCCTACCACAAGCACTTCCGCCGCGCGCACCCCGACAAGAACCGCACGTACTACCCGAAGGCCGCCCTCAGGGCGCATTATATGTGCGAGGTCTGCGGGAAGATGTTCCAGAGCCAAACAATGCTAAAGGACCACAGTCACATGCACTCCGACGTGAAGCAGTTCTCTTGTGCGCAATGCGGGAAGGCGTTCCAGAGGAAATACCGGCTACTGGTCCATGAGAAGATCCATGGGGAGGCGAGGAAGACTTATCCCTGCTCCATATGTGGGAAAACGTATTCTACTTCGAGTAATGTTAGCAAACATATGGCGAGCCACTCATCCCTGAAGCCATACAAATGTGAAATGTGTGGGAAGTCCTTCCGTCACGGATGCGAGAAGCGAGCACACTTCACGTACGTACATCTGAAGAAGCCTTGGCCAAAACGGAACAGGGATAAAAGGAGATCGAATGCTGTAGCCGGCGATTTCGTAGAGGATAATTACTGA
Protein Sequence: MQDTDYGMLSHLCWECSYRLHNFHRFKTKALQSYHLLKEILRTESYITSQLLKCIDRHTNGLASSLNKQVIDPETDVYFCEPITLKSEEVANVLSDVSVQELELKSEKEIIDTPVVSNDLVKDESSDSDLNNDEILSANDETDEEYEAPKSKVKRIKKPVKKSLKVQKKVDKRLRPLHEAVNEELFTITLLSEEEQLLELQKRKETSNYKTTKYQCEMCYKGFKEVEAYKSHMTRHTDRWGPHKCPICHLRYASKREAKAHGASHALRLGCKQCDYVTTVRHAAKRHEDFHKGTTYKCPHCTEEFCKYTTYLGHLRIKHPSDFVCELCGYSFVSLKGKNMHKKLKHRFENRQISENSPYCEKCDVRFASEEALQTHLKLSSRHKDPIETEVIIELSFSLLSSEALEESERKRRKPNTARAKTMESSGPIKCEQCDTQLPDARAYHKHFRRAHPDKNRTYYPKAALRAHYMCEVCGKMFQSQTMLKDHSHMHSDVKQFSCAQCGKAFQRKYRLLVHEKIHGEARKTYPCSICGKTYSTSSNVSKHMASHSSLKPYKCEMCGKSFRHGCEKRAHFTYVHLKKPWPKRNRDKRRSNAVAGDFVEDNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -