Basic Information

Insect: Blastobasis adustella
Gene Symbol: su(Hw)
Assembly: GCA_907269095.1
Location: OU026136.1:6125463-6132530[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 11 7.6 0.9 2 22 21 41 20 41 0.94

2 13 0.00091 0.086 14.2 2.6 1 23 56 79 56 79 0.96

3 13 0.23 22 6.6 2.5 3 23 88 109 87 109 0.96

4 13 0.00041 0.039 15.3 2.2 1 20 114 133 114 135 0.96

5 13 5.2e-06 0.00049 21.2 0.3 1 23 146 169 146 169 0.97

6 13 0.057 5.4 8.5 6.6 1 23 175 198 175 198 0.95

7 13 6.2e-05 0.0058 17.9 0.2 1 23 205 227 205 227 0.98

8 13 0.18 17 7.0 0.5 1 23 232 254 232 254 0.98

9 13 2.3e-06 0.00022 22.3 0.4 1 23 260 282 260 282 0.99

10 13 8e-05 0.0076 17.5 0.6 2 23 286 307 286 307 0.98

11 13 0.63 60 5.3 0.2 9 23 335 350 323 350 0.87

12 13 5.6e-06 0.00053 21.2 0.3 1 23 357 379 357 379 0.95

13 13 3.7 3.5e+02 2.8 0.1 3 23 387 410 386 410 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	11	7.6	0.9	2	22	21	41	20	41	0.94
2	13	0.00091	0.086	14.2	2.6	1	23	56	79	56	79	0.96
3	13	0.23	22	6.6	2.5	3	23	88	109	87	109	0.96
4	13	0.00041	0.039	15.3	2.2	1	20	114	133	114	135	0.96
5	13	5.2e-06	0.00049	21.2	0.3	1	23	146	169	146	169	0.97
6	13	0.057	5.4	8.5	6.6	1	23	175	198	175	198	0.95
7	13	6.2e-05	0.0058	17.9	0.2	1	23	205	227	205	227	0.98
8	13	0.18	17	7.0	0.5	1	23	232	254	232	254	0.98
9	13	2.3e-06	0.00022	22.3	0.4	1	23	260	282	260	282	0.99
10	13	8e-05	0.0076	17.5	0.6	2	23	286	307	286	307	0.98
11	13	0.63	60	5.3	0.2	9	23	335	350	323	350	0.87
12	13	5.6e-06	0.00053	21.2	0.3	1	23	357	379	357	379	0.95
13	13	3.7	3.5e+02	2.8	0.1	3	23	387	410	386	410	0.78

Sequence Information

Coding Sequence: ATGCCGCGTCCAAAAAGGAAAACGCGATCTGTTGGGACACCTAAAACTACCGAGTGCACACAATGCGAGCATTGTAACAGTATATTAAAAAATGCTCTACTTCTACGTAAACATCTCAAGAAGTGCAAAATGAATATTAAATCTTTGGAACCTATAAAGCCTATTTTCAGCTGCAAAGAGTGCACCAAAAAATACAAGTTCAAAGCAACTTTTTTGGCTCACTTAAAAAATGAACATTCTAAGGAGCCAGGCAGTGTGGCATGTAGCCATTGTCATGTACGTTGCCCTAATGAAGAGGTGCTAAAGAACCATGTAGCCACCATCCATGAACAGCCCGTCTACTCTTGTCCACATTGTCAACAGCAGTTTGTGCGTCACTATCATGTCGCTCGCCATATGGCACAGACTGGCTGCGATGGCAATGGTGTGTCTATATACCCTTGCTCGATTTGCAGTGCACAATTTAGCAGGAAAGACAATTTGATGGTACATCTTAGACTGCAACATATTACCAGAAGAGAGTTCCAATGTAAACAGTGTGATTTTAGTACTAAAAGTTTCTCAAAATTATGTGTACATCATCAAGCCAATCACACAGATGGAAAACCAACATATGAATGTGACATTTGTAGTAAAGTCACTAGTTCTCGAGCATCAATGACTAAACACCTGGAGATACATGGAGAGAAGAAATATGAGTGTGACGTGTGCAAGTTCAGCTCATTCACTGTGGAAGTGATGCGGCGTCACGTGCTGACCCACGTCAAGGAAAAGCCGTACAAGTGTGTGATTTGCGAGAAGTCTTTCATTCAGCCGCTCCAGCTACGTGCACATTTAAAGAAACATGAGGAAAATACTTGTTCGGAATGTGGCGACGTGTTCAAATCCAAGTTGAGCTTGATGGTCCACCAGAGGACACACGTGAATACTGAAAAAGTAGGAGGACAAGTGAAGAATGCCAAGACCGTGTGTCCGCATGAGGAATGTGTCGACTCCGATGCCACGTACGGGAACGAACATGAGCTGAGGAGGCATATAAGGCAACAACATACAAATGATGAGAAACCTTACCGCTGTGAGGTCTGCGGCAAGGAGTACTCCAAGCTGACGAACCTGCGGCGGCATGTGGCAGCGCATACTCTGGAGCGCGCCCGCCGCTGCATGTACTGCGTGTTGCCTCGCGCGTACGTGCGCGGTATGCAGCTGGTGCGGCACGTGCGGATGGCGCACCCCACCGTGTTCAAGGACCACCTCACGCACGTGCGGAGTGTGCTCGGCACGACGCTTCAGAGCGACCGCGTGAAGCACTCCGAGCTGGAGTCGATCCTGAACGTCCTGGACGCGGAGGCGGACCGCATTCTGGAAGGCTACGGCGAGGGCGTGCTGTACGGCGGCATGATGGACGCCGCGGACGCCGCAGACGCCGAACCGGAGCCCGAGCCGGCGCCCTCTAATGTCAAGGCTGAACACAATCCATTGATGAGTGAAGAGGAGCTCTCAGAAAACTTGAACAAATTGTTGGTTCAACTCATAGACAAGGAGGCGCTCGAGTGTTTCGGGTGGCCCAAAGAACCCGTTGATACGGTCCTGGAGAAAGTGATCGAGAACTGTGGCGCGAAGCCAGCAGCGCACGGCCGCTGGCCACGAGTGCAGCGATTGCGTGAGAACGCTAAACACCTGTTCCTGTACGCTGTCGAGGACAAGAACATCGCCCGGATGCTCGCCACGCACACCATAGACCAGGTCGTCAAACACATCCTCACTGTCACCGTGGAAGACGAGTGA
Protein Sequence: MPRPKRKTRSVGTPKTTECTQCEHCNSILKNALLLRKHLKKCKMNIKSLEPIKPIFSCKECTKKYKFKATFLAHLKNEHSKEPGSVACSHCHVRCPNEEVLKNHVATIHEQPVYSCPHCQQQFVRHYHVARHMAQTGCDGNGVSIYPCSICSAQFSRKDNLMVHLRLQHITRREFQCKQCDFSTKSFSKLCVHHQANHTDGKPTYECDICSKVTSSRASMTKHLEIHGEKKYECDVCKFSSFTVEVMRRHVLTHVKEKPYKCVICEKSFIQPLQLRAHLKKHEENTCSECGDVFKSKLSLMVHQRTHVNTEKVGGQVKNAKTVCPHEECVDSDATYGNEHELRRHIRQQHTNDEKPYRCEVCGKEYSKLTNLRRHVAAHTLERARRCMYCVLPRAYVRGMQLVRHVRMAHPTVFKDHLTHVRSVLGTTLQSDRVKHSELESILNVLDAEADRILEGYGEGVLYGGMMDAADAADAEPEPEPAPSNVKAEHNPLMSEEELSENLNKLLVQLIDKEALECFGWPKEPVDTVLEKVIENCGAKPAAHGRWPRVQRLRENAKHLFLYAVEDKNIARMLATHTIDQVVKHILTVTVEDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00209137;
90% Identity: iTF_00209137;
80% Identity: -