Badu010247.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- ken
- Assembly
- GCA_907269095.1
- Location
- OU026135.1:9123443-9133121[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.001 0.099 14.0 1.6 1 23 257 279 257 279 0.98 2 11 0.0023 0.22 12.9 2.3 1 23 286 308 286 308 0.97 3 11 0.012 1.2 10.6 0.1 1 23 312 335 312 335 0.89 4 11 5.2e-05 0.0049 18.1 4.7 1 23 342 365 342 365 0.96 5 11 0.00041 0.039 15.3 2.9 2 23 372 393 371 394 0.94 6 11 0.00022 0.021 16.1 0.0 1 23 405 427 405 427 0.97 7 11 1e-05 0.00096 20.3 0.9 1 22 433 454 433 458 0.94 8 11 0.043 4 8.9 1.7 3 23 468 489 466 489 0.96 9 11 1.8e-06 0.00017 22.7 0.5 1 23 495 518 495 518 0.97 10 11 8.5e-05 0.008 17.4 2.7 1 23 527 549 527 549 0.98 11 11 0.012 1.1 10.7 0.0 1 23 555 578 555 578 0.95
Sequence Information
- Coding Sequence
- ATGGAACACGAAGACTCCAGTGCCTCGACAAAAATATATTTTTGTAATAGTTGTTTGTGTCCGAATAACGAAAATGTTTTGTATTACTTTCAAATTAGAAATGTCCATCTACAAGGAATTTTTCAGACTGAAACCATAAATTTATGCACACTTTGTAAAACCAGAGCAAAGCAAGTTGAGACATTCATACAAAATGTCGAGAGCAACCAATTGCTTTTGGAAAATTTTCACAAAATATCAAAATCCACATGTGAAAGCATCAGATCTCAGATTAATCTGCCAACTCTGAAACTAAGCAAGTTTGACATAATTGATTTAGGCGGTCCAAACCAGGACACGTCTATTGAAGAATCATTCAACATATCAAGTAATAATGTTCTTCAGCAAACAACAGTTGCGGGTTATGTGAAAGTTAAACAAGAATTGAAGATAGAAGTGGAAGATTTTGAAGGAGATGGTTTTGATGAGCACTTTTTAAATGAAGACATTAGTGCTAAAGAAACAGATATTGATGTGAAACTTGAGCAATTCCAAGATGAAGATGAGTATCCATTAACATTTTTAAAAGAAGAGCTCGGTGTAAAAACCGTTAACAGGAAAATTTTAAAGGCATCTAAGAAAACGGGTGTAAAAGGAAAACATAAAAAAAAGAATAATAGTCTGAGTGTTGATGATGAATTCCGAATTGAACCATTCACCATTTCAAAGGAGCAGTGTATGCAAGAGAGACTTAACAAATCTAGAGATGAGAAATATAAAAATTCTATTTATCATTGCGAAAATTGTGTCATAGGATTTACAAATAAGGATAGTTATGATACACATATGCAAATGCATAGTAAGAACAGTGGCAGCTTTGAATGTGATATCTGTAGGCGAAGATTCCAGTCAAAAGAGAAATTACTCTCCCATAGTAAATATCATAGTGTACGTTTTAAATGCACCGTATGCGGCGCGGCGTTTGCGACCAGAATCGCTGCGCGGGATCATTACACTGCCAGCCATTGCGATGGCCTCTACCAGTACACTTGCATGCATTGCTTCAAAGTTTTCAAGCGGCATACCTCTCTAAGGAAGCACATCGCCGTCGTCCATTCGTCGAAGGAGCGCGTGCAATGCGACTATTGCAACAAAACCTACAAGAACAAGCAAGTTTTGAAGTCGCATTTCCTAGTCCACCACCCGTCAGCGCCCAAAGAGCGGCTGAAGCGCTACGCCTGTTCGACATGCGGCGCTGCATTCAGCGCTCCCTCACTGCTGCGAGCGCACGCGCTGAAACACACGCACCGTCGGGACTATTACTGCGTCGAGTGTGATAAGAGTTTCAAGTCCGAGGGTGCGTTGAATCATCATCTGAAGACCACCACGCCTCATGTTAGCAATTCACAGCTACCGTTTGGATGCTCGCATTGCAGCAAGCGGTTCCCGATCCGGCGCGACGTGGAGCAACATACCAATAGAATCCACCTCAACATCAAACCCTATAAATGTGATAAGTGTGATAAGGCGTACGTGACCAGCTGGTCCCTGAAGGATCACCAGCGTCTAATACACGAAGGCTACAAACGACCAATGAAGTTCCCGTGCACGATGTGTGACAAGATTTTCGACCGCAACTGCATACTCAAGTCGCACATGCGCACGCACACCGGCGAGCGTCCGTTCGCGTGCGCTCGCTGCGGCGCCGCGTTCGCGCAGCGCGGGGTGCTCGCCACGCACGTACGGCTCGTGCATCTCCGGGTCGCCAGGGATGGAGGCCCGAAGAGGGGGCGCAAGTGA
- Protein Sequence
- MEHEDSSASTKIYFCNSCLCPNNENVLYYFQIRNVHLQGIFQTETINLCTLCKTRAKQVETFIQNVESNQLLLENFHKISKSTCESIRSQINLPTLKLSKFDIIDLGGPNQDTSIEESFNISSNNVLQQTTVAGYVKVKQELKIEVEDFEGDGFDEHFLNEDISAKETDIDVKLEQFQDEDEYPLTFLKEELGVKTVNRKILKASKKTGVKGKHKKKNNSLSVDDEFRIEPFTISKEQCMQERLNKSRDEKYKNSIYHCENCVIGFTNKDSYDTHMQMHSKNSGSFECDICRRRFQSKEKLLSHSKYHSVRFKCTVCGAAFATRIAARDHYTASHCDGLYQYTCMHCFKVFKRHTSLRKHIAVVHSSKERVQCDYCNKTYKNKQVLKSHFLVHHPSAPKERLKRYACSTCGAAFSAPSLLRAHALKHTHRRDYYCVECDKSFKSEGALNHHLKTTTPHVSNSQLPFGCSHCSKRFPIRRDVEQHTNRIHLNIKPYKCDKCDKAYVTSWSLKDHQRLIHEGYKRPMKFPCTMCDKIFDRNCILKSHMRTHTGERPFACARCGAAFAQRGVLATHVRLVHLRVARDGGPKRGRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00209130;
- 90% Identity
- iTF_00209130;
- 80% Identity
- -