Basic Information

Insect: Blastobasis adustella
Gene Symbol: CG12744
Assembly: GCA_907269095.1
Location: OU026131.1:12307870-12311483[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.2e-07 4e-05 24.7 2.0 2 23 296 317 295 317 0.97

2 11 8.8e-05 0.0083 17.4 4.2 1 23 323 346 323 346 0.96

3 11 4.6e-06 0.00044 21.4 0.2 1 23 364 386 364 386 0.99

4 11 0.0015 0.14 13.5 2.3 1 23 393 415 393 415 0.98

5 11 0.27 26 6.4 5.9 1 23 421 443 421 443 0.99

6 11 2e-05 0.0019 19.4 0.3 1 23 449 472 449 472 0.97

7 11 0.021 2 9.9 1.1 2 23 478 497 477 497 0.96

8 11 3e-06 0.00029 22.0 2.2 1 23 503 525 503 525 0.97

9 11 1.5e-05 0.0014 19.8 1.0 1 23 531 553 531 553 0.99

10 11 0.00035 0.033 15.5 0.7 1 23 559 582 559 582 0.96

11 11 0.0078 0.74 11.3 3.2 1 21 588 608 588 609 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.2e-07	4e-05	24.7	2.0	2	23	296	317	295	317	0.97
2	11	8.8e-05	0.0083	17.4	4.2	1	23	323	346	323	346	0.96
3	11	4.6e-06	0.00044	21.4	0.2	1	23	364	386	364	386	0.99
4	11	0.0015	0.14	13.5	2.3	1	23	393	415	393	415	0.98
5	11	0.27	26	6.4	5.9	1	23	421	443	421	443	0.99
6	11	2e-05	0.0019	19.4	0.3	1	23	449	472	449	472	0.97
7	11	0.021	2	9.9	1.1	2	23	478	497	477	497	0.96
8	11	3e-06	0.00029	22.0	2.2	1	23	503	525	503	525	0.97
9	11	1.5e-05	0.0014	19.8	1.0	1	23	531	553	531	553	0.99
10	11	0.00035	0.033	15.5	0.7	1	23	559	582	559	582	0.96
11	11	0.0078	0.74	11.3	3.2	1	21	588	608	588	609	0.96

Sequence Information

Coding Sequence: ATGGTGTACGTAGAAATTAAGTCAAAAACACCAAATAGTCCGTGTAAAGGTGGTGGAGTGAAGAAAATAAAAAATACTAATGTACATGATACTAAAATTGTTGATGTTATAATAAATTCAACAGATCCACAGGTAAGTTCCAATGAGAACACTGATGGCAGTTTACAAGATTCTAATGAAAGAGGTTTATCTGACACTAAGGCTCTCAATATATCTAGAAGTGGAAGACGTAGAAAGATGAGTTTTAAAGGCTTGGAAGCAATGGATACTTTAATCAATTTGACGCCTAATTTGAAGTCATCTACAGTTACTAATGGATTTTCTTTAAATAATAATAATATTGCTGTCAGTGATCAAAACAATGTTGTTGGCAATGCCTTGCCACAGGGCGGAATCACATACAGGCAAATTAAAACAAAGTCATCACCAAGAACAAAATCAAAATCTGCTAGACCTCAACCAATGGAACCAAAGTTGAGACAGCAAGTTATAAATAACATGAAAAGTGTTTTGGCACCTGCTAAGGATTCATTAAGTAAATCTAAATCCACAAACAAATCTAAAGCAGTCTCAAAAAGAAAAACTAAAGCACAGGCACTAAAAAGAATGGAGCCCGAGTTACGTGAGGAGCTTATAAACAATATGAAGAGCATTTTATCCATTGATGATGATAGCCAGGACAGCATATCCACACAGAAATCATTTTCAAAGAGTAGACCCAAACAGCAATCTAATAAGAAAAAATCTAAAACAGCACCACTTGAATTCATTGATGTGGAACAGAATACCAAAAAGCTTAAACAAGAGACTGATGTAAATGGTGCGAAAGGTAAACCCAAGCAAGTCACCTTAAGCAACGGTGTTGTTTTAACCCTGTCACTTGTTAAATGCGATTATTGTCAAAAGACCTTCAGTAACAAGCAGTCTCTAAGCAGGCATATGTTAATGCATCTTAATATGAAGCCACACAGTTGTCGCTTGTGTCCAAAAAAATTCCGTTATAGTTCCACACTTAAAATTCATACTAGAAAGATCCATCCAGACACAGTTAAAGAAGGCAAAGTGGCACCACCCGTGGTACCAGAGTTCTATGTTTGTCAGATATGTGACAAAGAATTCATGATGCAAGATAACTTGGAGCTGCATTTGCAAACTCATATTAAAAGTGAAAATAATTTTAACTGTTTATACTGTGAGAAGAAATTTTCATACCGCCTTTTATTACTTCAACATGAAAAAACACATCTTACCACAAATAAATACAAATGTCACATGTGTGAAATGAGCTATGACTGCCGCAATAAGTTGACCCTACATATTAAATCTCATAAGAAAATAAAGGACTATATTTGTCAGTATTGCGGGAAAGAATTTGGAAGGCTGAGTGGAATAAAAAGACATGTACGTGTATCTCATGGAGGGCAAAGGGTGGAGTGTCCAATTTGCAGGAAAAAGTTAAAGGGGCACTTGACCGAGCATATGAGGGTTCATGAACAAGAACGTCCACATGTTTGTGATGAATGTGGTCAACGTTTCACCCAATCAACTCAACTGACAGTTCATAAGAGATCTCACACTGGAGACAAGCCTTATGTGTGTAAAATTTGTAAGCGTCCATTTGGACATTCTAATGCTTTAATGCTCCACATTAGAAGACACACAGGGGAGAAGCCGTTCGCCTGTGCTATGTGCCCCATGACATTCTCCCAGCTCCCTCATATGAAGACCCATATGAGTAGAATTCATGGCAAAGAAAGCTCCTACAAATGTCACAAATGTCGAGAATTTTTCAAGCTGAAATTTGATTTAGATAATCATATTAAAAGTTGTACTGTTGGTGAAAAAGAGCTTACATTTGAAGAAAAAATACAAGCTACAGTTCAATTTGATGAAATTGAGATTGAATCTACATTGTCCTTGTCGAAGATGAGATTTCTCATTGCGCTGCTTCTAAGCATGATTGCTTCAAAAGATAAAATGAAGGTACTAGGTTTCAACAAACGTTTGATCGATGAACTCTTAGAAGAATCTCTGTCTGCTATGGGACACAACCCTTGTAAGGAAGATACCTTGACACCACTTAAACGCCTCAAGGCCAACGTAGAGATCCTACTGAAAGCTACAGTCCCTGAAATGCAAATGGAAAAGTTCAGAGGAGAAAACAAAACAACGGAACAGATCCTGTTACTTCTCACCGAGGAAATCAATTGA
Protein Sequence: MVYVEIKSKTPNSPCKGGGVKKIKNTNVHDTKIVDVIINSTDPQVSSNENTDGSLQDSNERGLSDTKALNISRSGRRRKMSFKGLEAMDTLINLTPNLKSSTVTNGFSLNNNNIAVSDQNNVVGNALPQGGITYRQIKTKSSPRTKSKSARPQPMEPKLRQQVINNMKSVLAPAKDSLSKSKSTNKSKAVSKRKTKAQALKRMEPELREELINNMKSILSIDDDSQDSISTQKSFSKSRPKQQSNKKKSKTAPLEFIDVEQNTKKLKQETDVNGAKGKPKQVTLSNGVVLTLSLVKCDYCQKTFSNKQSLSRHMLMHLNMKPHSCRLCPKKFRYSSTLKIHTRKIHPDTVKEGKVAPPVVPEFYVCQICDKEFMMQDNLELHLQTHIKSENNFNCLYCEKKFSYRLLLLQHEKTHLTTNKYKCHMCEMSYDCRNKLTLHIKSHKKIKDYICQYCGKEFGRLSGIKRHVRVSHGGQRVECPICRKKLKGHLTEHMRVHEQERPHVCDECGQRFTQSTQLTVHKRSHTGDKPYVCKICKRPFGHSNALMLHIRRHTGEKPFACAMCPMTFSQLPHMKTHMSRIHGKESSYKCHKCREFFKLKFDLDNHIKSCTVGEKELTFEEKIQATVQFDEIEIESTLSLSKMRFLIALLLSMIASKDKMKVLGFNKRLIDELLEESLSAMGHNPCKEDTLTPLKRLKANVEILLKATVPEMQMEKFRGENKTTEQILLLLTEEIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00209119;
90% Identity: iTF_00209119;
80% Identity: -