Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026125.1:14658598-14677075[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00028 0.026 15.8 3.4 1 23 244 266 244 266 0.98

2 11 0.00016 0.015 16.5 7.6 1 23 272 294 272 294 0.96

3 11 0.0018 0.17 13.3 6.9 1 23 300 322 300 322 0.98

4 11 0.00074 0.07 14.5 1.0 1 23 328 350 328 350 0.97

5 11 1.7e-05 0.0016 19.6 0.5 1 23 356 378 356 378 0.97

6 11 6.9e-05 0.0066 17.7 0.0 1 23 384 406 384 406 0.97

7 11 5.8e-05 0.0055 18.0 0.4 1 23 411 433 411 433 0.96

8 11 0.0041 0.38 12.2 1.5 3 19 441 457 440 463 0.90

9 11 2.8e-05 0.0027 18.9 0.4 1 23 495 517 495 517 0.97

10 11 0.0013 0.12 13.7 3.3 1 23 578 600 578 600 0.96

11 11 4.6e-05 0.0044 18.3 4.0 1 23 610 632 610 632 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00028	0.026	15.8	3.4	1	23	244	266	244	266	0.98
2	11	0.00016	0.015	16.5	7.6	1	23	272	294	272	294	0.96
3	11	0.0018	0.17	13.3	6.9	1	23	300	322	300	322	0.98
4	11	0.00074	0.07	14.5	1.0	1	23	328	350	328	350	0.97
5	11	1.7e-05	0.0016	19.6	0.5	1	23	356	378	356	378	0.97
6	11	6.9e-05	0.0066	17.7	0.0	1	23	384	406	384	406	0.97
7	11	5.8e-05	0.0055	18.0	0.4	1	23	411	433	411	433	0.96
8	11	0.0041	0.38	12.2	1.5	3	19	441	457	440	463	0.90
9	11	2.8e-05	0.0027	18.9	0.4	1	23	495	517	495	517	0.97
10	11	0.0013	0.12	13.7	3.3	1	23	578	600	578	600	0.96
11	11	4.6e-05	0.0044	18.3	4.0	1	23	610	632	610	632	0.97

Sequence Information

Coding Sequence: ATGTGTATGCCGACGAACAACGTCGCGGGCTTCGGCTACTCGTGGTTTACGAGTTCTGGCGAGCTCAAGGGCGAGGTGGACGCACCCAGTAGCCTCAGCTACACTCTAGGGAACACAGTTTCACCGGAGACAACACTCACTGTGACATCTCACAAATCTCCTCAAGTACAAGAGAAAGTCGGTACTGTTGTGGCTGTGTCAAACACAGGTACAGCCCAAGTGACTAGGGTTGTTACAACGGGTACTCCTGTAACTGCGAGGCGGGCTATGTTCGTTCTAAATGAACCAACCCACACAATAAACAGAGTAGCCCAGCAGAATCAGACTGCTACTATACACACTGCAAATTTGGCATCAAAGCCGTTCATGACCCCTATTGGTCCAATTCAGTTGACTGCAGAAGAATGCAATGAGATTCTGATGAAAAGGGCACTTCAGGCCCAAGGAATTGCAACTCCAGTGATAGATGCATCTCAACTGAATCACACTCTGCTTAATGGTAGTTTAAAGAGTTTAGCAGAGGCTACAACACAACAGACCCAAGTAGAGACAATACAAACTACAACAGCCCACCAACAACAACAGCAGCCCCAACAACATCATCAGTTGTTGCATGCGAAACAAGAACCTGGTACAGCGAATAATTCACCAAAAGCGGTGTATTCCCAGACGGAGCTAATGCCTACACAGGTGATTCAAACTCAGCCACCACCCGCAAAGGAGAGACCGTACTCGTGTGATGAGTGTGGCAAGTCATTCCTGCTGAAACACCATCTCACTACTCATGCCAGAGTACATACAGGCGAGCGTCCCCACGTGTGCACGCACTGCGGCAAGGCGTTCGCGCGCAAGCACTGCCTCAACACGCATTTGCTGCTGCACTCCGCCGACCGGCCCTACCGCTGCCATGAGTGCAAGATGGCGTTCACGCTGAAACACCACCTCGTCACGCACTCCAGGGTGCACAGTCGCGAGCGGCCGTTCGTGTGCGGCGAGTGCGGGCGCGGGTTCCCGCTGAAGCGGCATCTCGTCACGCACAGCAAGTACCACGCGGGCGAGCGGCCCTACGTCTGCGCCGACTGCGGGGAGAGCTTCGCGCAGAAAGAGCACCTGGTGATGCACAGCCGGTTCCACGGGTCGCTGTCGCCGTTCGTGTGCGGCGACTGCGGCGCGGCGTTCGCGCGCAAGTTCCAGCTCGTCAACCACGGCCGCGCGCACGGCCGCGTGCCGCACGCCTGCCCCGTCTGCGGGAAGGAGTTCCTGCAGAAGCGGACGCTCGTCGCGCACATGAAGATCCACACTGGCGAGGGCGTGGTGGCGTGCCTGGAGTGCGGCGAGGCGTTCAAGAGCAAGGCCGAGCTGCAGACGCACTGCAAGCGGCAGCGGCACTGCCTCACGCCCATCTCGGATGAGTTCAAGCCGCAAATAGTACAGGTAATTGGTGCGGACGGACAGATAATGACGGAGAAAGCCACGCCCGGCTACGCCTGCCCAGAGTGTGGATCGTGTTTCAATACCAAGGAGGCGCTGTCGCTGCACGTGCGGCTGCACGCGGGCGACCGCACGTGCGTCACGGACCTGTGCGCGCTCACCGCCGCGCTACAGCCCGGGCTCGTGCCGCACCATCCGCACAACCAGCCGATCCAAATAATATCGTCCAATCCGAACAACGTTGTACACACACAAGTCATTGCCACGAATCACCATATAGCAGCGCCTCGACCTAAAATCCACTTCTGCGTGGACTGCGGGAAGGGATTCGCCGCCAAACACGGCTTACTCGCGCATCATAGGAGGCACCCGGACGGCGGCTGCACGGTGCGCACGCACGTGTGCGGGCAGTGCGGGAAGGCGTTCTTCCAGAAGAACCACCTCATGCTGCACCAGCGGCAGCACATGGACCTGCCGCCCAGGAACGTGACGAACCGCTCCGGGCAGGTGATCGGCAACCAGATCGTGGTGGGCTCGCTGGGCGGCCGCCGGCTGCTGGGCGGCGTGCAGCTGCTGCGGGACGCCAAGCTCGCGCTGCACAAGCCAAGGCACATACAGCAGGGTGGCGACGTGAAGGAAGTAGGCGGTCTTGTACTCTCCGCCGGTCGTGGCACTGGACTCATCAAGTACGAGATATCACTGCCGCAGCCCACGTCAGTTGTGCAAGTGCAACAACTGGACTGA
Protein Sequence: MCMPTNNVAGFGYSWFTSSGELKGEVDAPSSLSYTLGNTVSPETTLTVTSHKSPQVQEKVGTVVAVSNTGTAQVTRVVTTGTPVTARRAMFVLNEPTHTINRVAQQNQTATIHTANLASKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTLLNGSLKSLAEATTQQTQVETIQTTTAHQQQQQPQQHHQLLHAKQEPGTANNSPKAVYSQTELMPTQVIQTQPPPAKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCTHCGKAFARKHCLNTHLLLHSADRPYRCHECKMAFTLKHHLVTHSRVHSRERPFVCGECGRGFPLKRHLVTHSKYHAGERPYVCADCGESFAQKEHLVMHSRFHGSLSPFVCGDCGAAFARKFQLVNHGRAHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGVVACLECGEAFKSKAELQTHCKRQRHCLTPISDEFKPQIVQVIGADGQIMTEKATPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVPHHPHNQPIQIISSNPNNVVHTQVIATNHHIAAPRPKIHFCVDCGKGFAAKHGLLAHHRRHPDGGCTVRTHVCGQCGKAFFQKNHLMLHQRQHMDLPPRNVTNRSGQVIGNQIVVGSLGGRRLLGGVQLLRDAKLALHKPRHIQQGGDVKEVGGLVLSAGRGTGLIKYEISLPQPTSVVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -